RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 TMC6Q7Z403 805 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.73□□□□□ -1.49
MATR3-228ENST00000620916 FAM71BQ8TC56 605 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 ACSBG1Q96GR2 724 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 IWS1Q96ST2 819 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 OXCT2Q9BYC2 517 aaPredicted RBP5.73□□□□□ -1.49
MATR3-228ENST00000620916 CCDC68Q9H2F9 335 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 FAM198AQ9UFP1 575 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 ACAD8Q9UKU7 415 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 PAIP2BQ9ULR5 123 aaKnown RBP5.73□□□□□ -1.49
MATR3-228ENST00000620916 ZNF652Q9Y2D9 606 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 FAM169AQ9Y6X4 670 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 PNPLA7Q6ZV29 1317 aa5.73□□□□□ -1.49
MATR3-228ENST00000620916 EFCAB8A8MWE9 144 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 B4DLN1 442 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 PLIN1O60240 522 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 MGRN1O60291 552 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 CDC25BP30305 580 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 KCNJ6P48051 423 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 LIG3P49916 1009 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 SEPT7Q16181 437 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 CEP85LQ5SZL2 805 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 TNS4Q8IZW8 715 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 LRRC43Q8N309 656 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 TTC39CQ8N584 583 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 SLAIN1Q8ND83 568 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 SP7Q8TDD2 431 aaPredicted RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 CDK19Q9BWU1 502 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 SLC7A5P2Q9GIP4 190 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 DHX36Q9H2U1 1008 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 CD248Q9HCU0 757 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 KLC4Q9NSK0 619 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 UBAP1Q9NZ09 502 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 GGA2Q9UJY4 613 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 TARSL2A2RTX5 802 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 GOLGA6L4A6NEF3 574 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 CHL1O00533 1208 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 SART1O43290 800 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 VAMP4O75379 141 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 ABL1P00519 1130 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 ALOX15P16050 662 aaPredicted RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 YBX3P16989 372 aaKnown RBP eCLIP5.72□□□□□ -1.498e-10■■■□□ 19.2
MATR3-228ENST00000620916 SYT1P21579 422 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 ARHGAP25P42331 645 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 SCNN1BP51168 640 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 OXCT1P55809 520 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 SUZ12Q15022 739 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 PTPN14Q15678 1187 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 ARHGAP29Q52LW3 1261 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 BOLA3Q53S33 107 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 CCDC122Q5T0U0 273 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 THOC7Q6I9Y2 204 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 BICDL1Q6ZP65 573 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 RIC3Q7Z5B4 369 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 CEP57Q86XR8 500 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 CEP57L1Q8IYX8 460 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 ANKRD27Q96NW4 1050 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 PCSK1NQ9UHG2 260 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 LAMB4A4D0S4 1761 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 KIF7Q2M1P5 1343 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 MYBBP1AQ9BQG0 1328 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 EBAG9O00559 213 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 KIAA0754O94854 1291 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 CAVIN2O95810 425 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 CCNCP24863 283 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 TPD52L1Q16890 204 aaPredicted RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 DZIP1Q86YF9 867 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 SLC15A3Q8IY34 581 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 GPR161Q8N6U8 529 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.72□□□□□ -1.495e-7■□□□□ 10.8
MATR3-228ENST00000620916 SYNCQ9H7C4 482 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 ZCCHC17Q9NP64 241 aaKnown RBP5.72□□□□□ -1.49
MATR3-228ENST00000620916 ATXN10Q9UBB4 475 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 MAFFQ9ULX9 164 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 SSX2IPQ9Y2D8 614 aa5.72□□□□□ -1.49
MATR3-228ENST00000620916 PXDNLA1KZ92 1463 aa5.71□□□□□ -1.49
MATR3-228ENST00000620916 SH3TC1Q8TE82 1336 aa5.71□□□□□ -1.49
MATR3-228ENST00000620916 H3BQF6 201 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 TROVE2P10155 538 aaKnown RBP eCLIP5.71□□□□□ -1.5
MATR3-228ENST00000620916 APOBRQ0VD83 1088 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 WASHC5Q12768 1159 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 PDE3AQ14432 1141 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 BRD3Q15059 726 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 SNCBQ16143 134 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 ZNF827Q17R98 1081 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 ERCC6LQ2NKX8 1250 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 AGAP9Q5VTM2 703 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 NCCRP1Q6ZVX7 275 aaPredicted RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 KRT77Q7Z794 578 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 WHAMMQ8TF30 809 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 FRS2Q8WU20 508 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 SREK1Q8WXA9 508 aaKnown RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 GOLGA1Q92805 767 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 GCC1Q96CN9 775 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 EBF2Q9HAK2 575 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 ARFGAP3Q9NP61 516 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 IFT57Q9NWB7 429 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 USP31Q70CQ4 1352 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 CCDC162PA2VCL2 907 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 A6NNZ2 444 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms