RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PUF60Q9UHX1 559 aaKnown RBP7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 CEP131Q9UPN4 1083 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 NFE2L3Q9Y4A8 694 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 AKAP11Q9UKA4 1901 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 CUTAO60888 179 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 IPO7O95373 1038 aaKnown RBP7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 RXRAP19793 462 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 SSRP1Q08945 709 aaKnown RBP7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 BRD3Q15059 726 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 KANK3Q6NY19 840 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 HDXQ7Z353 690 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 SPDYE1Q8NFV5 336 aaPredicted RBP7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 SH3RF3Q8TEJ3 882 aaPredicted RBP7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 ATP8A2Q9NTI2 1148 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 ZSWIM5Q9P217 1185 aa7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 SAP30BPQ9UHR5 308 aaKnown RBP7.89□□□□□ -1.15
SRGAP3-213ENST00000618999 AKR1B15C9JRZ8 316 aaPredicted RBP7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 ZBTB43O43298 467 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 XBP1P17861 261 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 ADKP55263 362 aaKnown RBP7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 KIF23Q02241 960 aaPredicted RBP7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 HIC1Q14526 733 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 AOC3Q16853 763 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CC2D2BQ6DHV5 1058 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CC2D1AQ6P1N0 951 aaPredicted RBP7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 PODNQ7Z5L7 613 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 KIAA0825Q8IV33 1275 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 ESR2Q92731 530 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 MKNK2Q9HBH9 465 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 DCP1AQ9NPI6 582 aaPredicted RBP7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 ANGEL1Q9UNK9 670 aaKnown RBP7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 NEDD4P46934 1319 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CTAGE9A4FU28 777 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 PLA2G4AP47712 749 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 PICALMQ13492 652 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 KRT40Q6A162 431 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CYB5R4Q7L1T6 521 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 SUPT20HQ8NEM7 779 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 NUP133Q8WUM0 1156 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 SLC26A6Q9BXS9 759 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 IRS2Q9Y4H2 1338 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CTAGE15A4D2H0 777 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 USP17L8P0C7I0 530 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CTAGE8P0CG41 777 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 PLCG2P16885 1265 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 TXLNAP40222 546 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 SERPINB4P48594 390 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 RAD51AP2Q09MP3 1159 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CCDC93Q567U6 631 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CTAGE6Q86UF2 777 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 IFNL1Q8IU54 200 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CTAGE4Q8IX94 777 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 LARGE2Q8N3Y3 721 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 MLKLQ8NB16 471 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 DESI2Q9BSY9 194 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 PARD6BQ9BYG5 372 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 NBPF3Q9H094 633 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 SLC12A7Q9Y666 1083 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 SALL1Q9NSC2 1324 aa7.88□□□□□ -1.15
SRGAP3-213ENST00000618999 CCDC151A5D8V7 595 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 SMIM22K7EJ46 135 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 ECE2O60344 883 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 WDHD1O75717 1129 aaPredicted RBP7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 CYP2D6P10635 497 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 ANTXR2P58335 489 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 PDE4BQ07343 736 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 WTAPQ15007 396 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 PTPN21Q16825 1174 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 LONRF2Q1L5Z9 754 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 ZNF569Q5MCW4 686 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 CTR9Q6PD62 1173 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 IQCA1Q86XH1 822 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 LRRN4CLQ8ND94 238 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 RASSF8Q8NHQ8 419 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 GOLGA5Q8TBA6 731 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 TMEM87BQ96K49 555 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 KCNQ5Q9NR82 932 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 TMEM51Q9NW97 253 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 PCDHA5Q9Y5H7 936 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 MROH7-TTC4A0A0A0MT08 1334 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 TSPY2A6NKD2 308 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 MAP3K7O43318 606 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 PPP6R2O75170 966 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 DSG2Q14126 1118 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 CCDC148Q8NFR7 591 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 CAGE1Q8TC20 777 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 MTFR1LQ9H019 292 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 PIM2Q9P1W9 311 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 TCF3P15923 654 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 TAGLNQ01995 201 aaKnown RBP7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 TUBB2AQ13885 445 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 POSTNQ15063 836 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 AMHR2Q16671 573 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 MAP9Q49MG5 647 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 EXOC4Q96A65 974 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 CTAGE1Q96RT6 745 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 MYL10Q9BUA6 226 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 TUBB2BQ9BVA1 445 aa7.87□□□□□ -1.15
SRGAP3-213ENST00000618999 ZCCHC17Q9NP64 241 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms