RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 NDUFB10O96000 172 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 VCAM1P19320 739 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 CASTP20810 708 aaKnown RBP15.72■□□□□ 0.11
PDCD6-213ENST00000618970 PSMA5P28066 241 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 HOXA7P31268 230 aaPredicted RBP15.72■□□□□ 0.11
PDCD6-213ENST00000618970 LIFRP42702 1097 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 GCLCP48506 637 aaPredicted RBP15.72■□□□□ 0.11
PDCD6-213ENST00000618970 PPP4R3BQ5MIZ7 849 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 BLOC1S2Q6QNY1 142 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 POTEEQ6S8J3 1075 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 FBXL16Q8N461 479 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 GMCL1P1Q8NEA9 526 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 TMEM87BQ96K49 555 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 DEFB118Q96PH6 123 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 HTATIP2Q9BUP3 242 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 SMCHD1A6NHR9 2005 aa15.72■□□□□ 0.11
PDCD6-213ENST00000618970 HMGB1P09429 215 aaKnown RBP15.71■□□□□ 0.11
PDCD6-213ENST00000618970 SNHG28P0DPA3 235 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 PABPC4Q13310 644 aaKnown RBP eCLIP15.71■□□□□ 0.111e-7■■□□□ 12.2
PDCD6-213ENST00000618970 WTAPQ15007 396 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 TMEM67Q5HYA8 995 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 SLFN13Q68D06 897 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 CATSPERGQ6ZRH7 1159 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 Q6ZUG5 572 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 SPICE1Q8N0Z3 855 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 TBC1D32Q96NH3 1257 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 FEZ1Q99689 392 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 UBAC1Q9BSL1 405 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 SH2D4AQ9H788 454 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 TMOD4Q9NZQ9 345 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 RBM27Q9P2N5 1060 aaKnown RBP15.71■□□□□ 0.11
PDCD6-213ENST00000618970 GJD2Q9UKL4 321 aa15.71■□□□□ 0.11
PDCD6-213ENST00000618970 WDR46O15213 610 aaKnown RBP15.7■□□□□ 0.1
PDCD6-213ENST00000618970 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
PDCD6-213ENST00000618970 TRIM32Q13049 653 aa15.7■□□□□ 0.1
PDCD6-213ENST00000618970 TOB2Q14106 344 aaPredicted RBP15.7■□□□□ 0.1
PDCD6-213ENST00000618970 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
PDCD6-213ENST00000618970 SGMS1Q86VZ5 419 aa15.7■□□□□ 0.1
PDCD6-213ENST00000618970 PNMA1Q8ND90 353 aa15.7■□□□□ 0.1
PDCD6-213ENST00000618970 LPAR1Q92633 364 aa15.7■□□□□ 0.1
PDCD6-213ENST00000618970 NUP88Q99567 741 aaPredicted RBP15.7■□□□□ 0.1
PDCD6-213ENST00000618970 UPF3BQ9BZI7 483 aaKnown RBP15.7■□□□□ 0.1
PDCD6-213ENST00000618970 CRISPLD2Q9H0B8 497 aa15.7■□□□□ 0.1
PDCD6-213ENST00000618970 ALDH8A1Q9H2A2 487 aaPredicted RBP15.7■□□□□ 0.1
PDCD6-213ENST00000618970 RPAP3Q9H6T3 665 aaPredicted RBP15.7■□□□□ 0.1
PDCD6-213ENST00000618970 GOPCQ9HD26 462 aa15.7■□□□□ 0.1
PDCD6-213ENST00000618970 MORF4L1Q9UBU8 362 aa15.7■□□□□ 0.1
PDCD6-213ENST00000618970 A0A0G2JMZ2 1700 aa15.7■□□□□ 0.1
PDCD6-213ENST00000618970 BAZ2BQ9UIF8 2168 aaKnown RBP15.7■□□□□ 0.1
PDCD6-213ENST00000618970 PDHBP11177 359 aa15.69■□□□□ 0.1
PDCD6-213ENST00000618970 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
PDCD6-213ENST00000618970 TROAPQ12815 778 aa15.69■□□□□ 0.1
PDCD6-213ENST00000618970 FAM83BQ5T0W9 1011 aa15.69■□□□□ 0.1
PDCD6-213ENST00000618970 DIS3LQ8TF46 1054 aaKnown RBP15.69■□□□□ 0.1
PDCD6-213ENST00000618970 GMCL1Q96IK5 515 aa15.69■□□□□ 0.1
PDCD6-213ENST00000618970 P2RX7Q99572 595 aaKnown RBP15.69■□□□□ 0.1
PDCD6-213ENST00000618970 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDCD6-213ENST00000618970 PRO3102Q9H379 93 aa15.69■□□□□ 0.1
PDCD6-213ENST00000618970 TXNRD2Q9NNW7 524 aa15.69■□□□□ 0.1
PDCD6-213ENST00000618970 BRPF3Q9ULD4 1205 aa15.69■□□□□ 0.1
PDCD6-213ENST00000618970 CYP46A1Q9Y6A2 500 aa15.69■□□□□ 0.1
PDCD6-213ENST00000618970 ERICH2A1L162 156 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 HMGCRP04035 888 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 EVCP57679 992 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 CHMP4CQ96CF2 233 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 KAT14Q9H8E8 782 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 MYH6P13533 1939 aa15.68■□□□□ 0.1
PDCD6-213ENST00000618970 BMP3P12645 472 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 HERVK_113P62684 666 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 SART3Q15020 963 aaKnown RBP15.67■□□□□ 0.1
PDCD6-213ENST00000618970 TTBK2Q6IQ55 1244 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 KCTD1Q719H9 257 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 ZNF654Q8IZM8 581 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 TMTC2Q8N394 836 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 DCAF4Q8WV16 495 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 TRIB2Q92519 343 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 PAWRQ96IZ0 340 aaKnown RBP15.67■□□□□ 0.1
PDCD6-213ENST00000618970 FBXO28Q9NVF7 368 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 ADAMTS5Q9UNA0 930 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 NR2E3Q9Y5X4 410 aa15.67■□□□□ 0.1
PDCD6-213ENST00000618970 PALM3A6NDB9 673 aaPredicted RBP15.66■□□□□ 0.1
PDCD6-213ENST00000618970 PLA2G6O60733 806 aa15.66■□□□□ 0.1
PDCD6-213ENST00000618970 DSG3P32926 999 aa15.66■□□□□ 0.1
PDCD6-213ENST00000618970 ZNF543Q08ER8 600 aa15.66■□□□□ 0.1
PDCD6-213ENST00000618970 APOBRQ0VD83 1088 aa15.66■□□□□ 0.1
PDCD6-213ENST00000618970 SLC35G1Q2M3R5 365 aa15.66■□□□□ 0.1
PDCD6-213ENST00000618970 BTNL9Q6UXG8 535 aa15.66■□□□□ 0.1
PDCD6-213ENST00000618970 STAG2Q8N3U4 1231 aa15.66■□□□□ 0.1
PDCD6-213ENST00000618970 BRF1Q92994 677 aa15.66■□□□□ 0.1
PDCD6-213ENST00000618970 MYL10Q9BUA6 226 aa15.66■□□□□ 0.1
PDCD6-213ENST00000618970 PDRG1Q9NUG6 133 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms