RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 MYLIPQ8WY64 445 aa6.59□□□□□ -1.36
CUL3-216ENST00000617432 FAM155AB1AL88 458 aaPredicted RBP6.58□□□□□ -1.36
CUL3-216ENST00000617432 ZNF157P51786 506 aaPredicted RBP6.58□□□□□ -1.36
CUL3-216ENST00000617432 DLG4P78352 724 aa6.58□□□□□ -1.36
CUL3-216ENST00000617432 KCNB2Q92953 911 aa6.58□□□□□ -1.36
CUL3-216ENST00000617432 BCL9LQ86UU0 1499 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 PLCH1Q4KWH8 1693 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 GLI3P10071 1580 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 CELA3BP08861 270 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 FAAP100Q0VG06 881 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 TRIM26Q12899 539 aaPredicted RBP6.57□□□□□ -1.36
CUL3-216ENST00000617432 ZNF385BQ569K4 471 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 ZNF772Q68DY9 489 aaPredicted RBP6.57□□□□□ -1.36
CUL3-216ENST00000617432 C22orf34Q6ZV56 151 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 PDZD3Q86UT5 571 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 CDK19Q9BWU1 502 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 ADAMTS20P59510 1910 aa6.57□□□□□ -1.36
CUL3-216ENST00000617432 ATRNO75882 1429 aa6.56□□□□□ -1.36
CUL3-216ENST00000617432 ITSN1Q15811 1721 aa6.56□□□□□ -1.36
CUL3-216ENST00000617432 TRIM13O60858 407 aa6.56□□□□□ -1.36
CUL3-216ENST00000617432 CDKAL1Q5VV42 579 aa6.56□□□□□ -1.36
CUL3-216ENST00000617432 PRPF40BQ6NWY9 871 aaKnown RBP6.56□□□□□ -1.36
CUL3-216ENST00000617432 TMEM151BQ8IW70 566 aa6.56□□□□□ -1.36
CUL3-216ENST00000617432 PBXIP1Q96AQ6 731 aa6.56□□□□□ -1.36
CUL3-216ENST00000617432 ABCB6Q9NP58 842 aa6.56□□□□□ -1.36
CUL3-216ENST00000617432 SLAMF8Q9P0V8 285 aa6.56□□□□□ -1.36
CUL3-216ENST00000617432 CNOT6Q9ULM6 557 aaKnown RBP6.56□□□□□ -1.36
CUL3-216ENST00000617432 PHRF1Q9P1Y6 1649 aaKnown RBP6.56□□□□□ -1.36
CUL3-216ENST00000617432 SBNO1A3KN83 1393 aa6.55□□□□□ -1.36
CUL3-216ENST00000617432 NRAPQ86VF7 1730 aa6.55□□□□□ -1.36
CUL3-216ENST00000617432 SLIT2O94813 1529 aa6.55□□□□□ -1.36
CUL3-216ENST00000617432 CENPJQ9HC77 1338 aaPredicted RBP6.55□□□□□ -1.36
CUL3-216ENST00000617432 TMEM238LA0A1B0GVL6 79 aa6.55□□□□□ -1.36
CUL3-216ENST00000617432 SEMA7AO75326 666 aa6.55□□□□□ -1.36
CUL3-216ENST00000617432 NEFLP07196 543 aa6.55□□□□□ -1.36
CUL3-216ENST00000617432 THAP5Q7Z6K1 395 aa6.55□□□□□ -1.36
CUL3-216ENST00000617432 MCOLN1Q9GZU1 580 aa6.55□□□□□ -1.36
CUL3-216ENST00000617432 XYLT2Q9H1B5 865 aa6.55□□□□□ -1.36
CUL3-216ENST00000617432 ROCK2O75116 1388 aaKnown RBP6.55□□□□□ -1.36
CUL3-216ENST00000617432 H3BS24 57 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 PEX10O60683 326 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 HPXP02790 462 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 PPP2R3AQ06190 1150 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 MTMR3Q13615 1198 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 USPL1Q5W0Q7 1092 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 PPIP5K1Q6PFW1 1433 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 NRKQ7Z2Y5 1582 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 MFSD4AQ8N468 514 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.54□□□□□ -1.36
CUL3-216ENST00000617432 CCDC87Q9NVE4 849 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 RALGAPBQ86X10 1494 aa6.54□□□□□ -1.36
CUL3-216ENST00000617432 CDK12Q9NYV4 1490 aaPredicted RBP6.54□□□□□ -1.36
CUL3-216ENST00000617432 ACEP12821 1306 aa6.53□□□□□ -1.36
CUL3-216ENST00000617432 SASH1O94885 1247 aa6.53□□□□□ -1.36
CUL3-216ENST00000617432 ERVFC1P60507 584 aa6.53□□□□□ -1.36
CUL3-216ENST00000617432 ZXDCQ2QGD7 858 aaPredicted RBP6.53□□□□□ -1.36
CUL3-216ENST00000617432 IRF2BP1Q8IU81 584 aa6.53□□□□□ -1.36
CUL3-216ENST00000617432 NGDNQ8NEJ9 315 aaKnown RBP6.53□□□□□ -1.36
CUL3-216ENST00000617432 POLR3AO14802 1390 aaPredicted RBP6.53□□□□□ -1.36
CUL3-216ENST00000617432 EIF3AQ14152 1382 aaKnown RBP6.53□□□□□ -1.36
CUL3-216ENST00000617432 FAM83GA6ND36 823 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 PRR33A8MZF0 331 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 RFXAPO00287 272 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 NTF4P34130 210 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 RBM6P78332 1123 aaKnown RBP6.52□□□□□ -1.37
CUL3-216ENST00000617432 CHRNA2Q15822 529 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 CCDC97Q96F63 343 aaPredicted RBP6.52□□□□□ -1.37
CUL3-216ENST00000617432 TMEM39AQ9NV64 488 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 TMEM59LQ9UK28 342 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 TRPC5Q9UL62 973 aaPredicted RBP6.52□□□□□ -1.37
CUL3-216ENST00000617432 KCTD3Q9Y597 815 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 ST14Q9Y5Y6 855 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 ARHGEF10O15013 1369 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 GPRASP1Q5JY77 1395 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 TONSLQ96HA7 1378 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 PIK3C2AO00443 1686 aa6.52□□□□□ -1.37
CUL3-216ENST00000617432 DNAJC25-GNG10A0A024R161 153 aa6.51□□□□□ -1.37
CUL3-216ENST00000617432 PPM1JQ5JR12 505 aa6.51□□□□□ -1.37
CUL3-216ENST00000617432 SFRP5Q5T4F7 317 aa6.51□□□□□ -1.37
CUL3-216ENST00000617432 CDC37L1Q7L3B6 337 aa6.51□□□□□ -1.37
CUL3-216ENST00000617432 PCGF6Q9BYE7 350 aa6.51□□□□□ -1.37
CUL3-216ENST00000617432 DNAJC25Q9H1X3 360 aa6.51□□□□□ -1.37
CUL3-216ENST00000617432 BRWD3Q6RI45 1802 aa6.51□□□□□ -1.37
CUL3-216ENST00000617432 COL14A1Q05707 1796 aaKnown RBP6.51□□□□□ -1.37
CUL3-216ENST00000617432 NWD2Q9ULI1 1742 aa6.51□□□□□ -1.37
CUL3-216ENST00000617432 ARNTP27540 789 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 HK2P52789 917 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 ZC3H6P61129 1189 aaKnown RBP6.5□□□□□ -1.37
CUL3-216ENST00000617432 RALGPS1Q5JS13 557 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 UBE3DQ7Z6J8 389 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 UNC5CLQ8IV45 518 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 KCT2Q8NC54 265 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 UBE2FQ969M7 185 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 RNF32Q9H0A6 362 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 SLC6A17Q9H1V8 727 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 NPHS2Q9NP85 383 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 CAPN6Q9Y6Q1 641 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 KIAA0232Q92628 1395 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 AKAP12Q02952 1782 aa6.5□□□□□ -1.37
CUL3-216ENST00000617432 USP6P35125 1406 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms