RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 PRR5LQ6MZQ0 368 aa16.34■□□□□ 0.21
PRKD1-209ENST00000616995 KCTD1Q719H9 257 aa16.34■□□□□ 0.21
PRKD1-209ENST00000616995 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
PRKD1-209ENST00000616995 CABP7Q86V35 215 aa16.33■□□□□ 0.21
PRKD1-209ENST00000616995 CAPZA3Q96KX2 299 aa16.33■□□□□ 0.21
PRKD1-209ENST00000616995 DBNDD1Q9H9R9 158 aa16.33■□□□□ 0.21
PRKD1-209ENST00000616995 ADAMTS7Q9UKP4 1686 aa16.33■□□□□ 0.21
PRKD1-209ENST00000616995 PRCPP42785 496 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.2
PRKD1-209ENST00000616995 KRT31Q15323 416 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 UBE2SQ16763 222 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
PRKD1-209ENST00000616995 SEMA3EO15041 775 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 DPYDQ12882 1025 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 CSGALNACT2Q8N6G5 542 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 TBCKQ8TEA7 893 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 MYH2Q9UKX2 1941 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 TJP1Q07157 1748 aa16.33■□□□□ 0.2
PRKD1-209ENST00000616995 PSMA7O14818 248 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
PRKD1-209ENST00000616995 PPP2R3AQ06190 1150 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 RCSD1Q6JBY9 416 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 TC2NQ8N9U0 490 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 RBM17Q96I25 401 aaKnown RBP16.32■□□□□ 0.2
PRKD1-209ENST00000616995 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 COL1A1P02452 1464 aaPredicted RBP16.32■□□□□ 0.2
PRKD1-209ENST00000616995 ATP2C1P98194 919 aaPredicted RBP16.32■□□□□ 0.2
PRKD1-209ENST00000616995 NONOQ15233 471 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRKD1-209ENST00000616995 CAGE1Q8TC20 777 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 CALML4Q96GE6 196 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 LRRC41Q15345 812 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 BARGINQ6ZT62 677 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 PSMB7Q99436 277 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 DEF6Q9H4E7 631 aa16.32■□□□□ 0.2
PRKD1-209ENST00000616995 ENC1O14682 589 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 PLCG1P19174 1290 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 FXR1P51114 621 aaKnown RBP eCLIP16.31■□□□□ 0.2
PRKD1-209ENST00000616995 ARID5AQ03989 594 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 FUT2Q10981 343 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 MCM6Q14566 821 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
PRKD1-209ENST00000616995 CTAGE1Q96RT6 745 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 MMRN2Q9H8L6 949 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 MRPL44Q9H9J2 332 aaKnown RBP16.31■□□□□ 0.2
PRKD1-209ENST00000616995 ATRNO75882 1429 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 CTIFO43310 598 aaKnown RBP16.31■□□□□ 0.2
PRKD1-209ENST00000616995 ORC4O43929 436 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 REXO1Q8N1G1 1221 aaKnown RBP16.31■□□□□ 0.2
PRKD1-209ENST00000616995 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 MED15Q96RN5 788 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 LEMD3Q9Y2U8 911 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 LAMB4A4D0S4 1761 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
PRKD1-209ENST00000616995 DISP2A7MBM2 1401 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 B4DLN1 442 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 GTPBP6O43824 516 aaPredicted RBP16.31■□□□□ 0.2
PRKD1-209ENST00000616995 COPB1P53618 953 aaKnown RBP16.31■□□□□ 0.2
PRKD1-209ENST00000616995 TBC1D8BQ0IIM8 1120 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 FKBP15Q5T1M5 1219 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 TRIML1Q8N9V2 468 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 ZNHIT6Q9NWK9 470 aaKnown RBP16.31■□□□□ 0.2
PRKD1-209ENST00000616995 RMND1Q9NWS8 449 aa16.31■□□□□ 0.2
PRKD1-209ENST00000616995 CYTH3O43739 400 aa16.3■□□□□ 0.2
PRKD1-209ENST00000616995 ERCC5P28715 1186 aaPredicted RBP16.3■□□□□ 0.2
PRKD1-209ENST00000616995 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRKD1-209ENST00000616995 IL17AQ16552 155 aa16.3■□□□□ 0.2
PRKD1-209ENST00000616995 ZFP91Q96JP5 570 aaPredicted RBP16.3■□□□□ 0.2
PRKD1-209ENST00000616995 LRRC4BQ9NT99 713 aa16.3■□□□□ 0.2
PRKD1-209ENST00000616995 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRKD1-209ENST00000616995 RASA1P20936 1047 aa16.3■□□□□ 0.2
PRKD1-209ENST00000616995 USH1GQ495M9 461 aa16.3■□□□□ 0.2
PRKD1-209ENST00000616995 GDAP1L1Q96MZ0 367 aa16.3■□□□□ 0.2
PRKD1-209ENST00000616995 NUP98P52948 1817 aa16.3■□□□□ 0.2
PRKD1-209ENST00000616995 MACROD2A1Z1Q3 448 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 POTEMA6NI47 508 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 GNA11P29992 359 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 TTBK2Q6IQ55 1244 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 RAD9BQ6WBX8 426 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 DGKHQ86XP1 1220 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 LRWD1Q9UFC0 647 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 PCDHA6Q9UN73 950 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 LUC7L2Q9Y383 392 aaKnown RBP16.29■□□□□ 0.2
PRKD1-209ENST00000616995 PCDHA8Q9Y5H6 950 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 AKAP11Q9UKA4 1901 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 STX10O60499 249 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 FCER1AP12319 257 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 KRT222Q8N1A0 295 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 ANKRD7Q92527 254 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 FAM207AQ9NSI2 230 aaPredicted RBP16.29■□□□□ 0.2
PRKD1-209ENST00000616995 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 NWD2Q9ULI1 1742 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 DISC1Q9NRI5 854 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 POLLQ9UGP5 575 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 MAD2L2Q9UI95 211 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 PLEKHG2Q9H7P9 1386 aa16.29■□□□□ 0.2
PRKD1-209ENST00000616995 PPP1R3GB7ZBB8 358 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms