RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 CHRNDQ07001 517 aa20.6■□□□□ 0.89
GABPB1-212ENST00000615671 NUP58Q9BVL2 599 aa20.6■□□□□ 0.89
GABPB1-212ENST00000615671 GDF11O95390 407 aa20.6■□□□□ 0.89
GABPB1-212ENST00000615671 TAOK1Q7L7X3 1001 aa20.6■□□□□ 0.89
GABPB1-212ENST00000615671 KRBA2Q6ZNG9 492 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 TEKT3Q9BXF9 490 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 MRPL11Q9Y3B7 192 aaKnown RBP20.59■□□□□ 0.89
GABPB1-212ENST00000615671 POLR3AO14802 1390 aaPredicted RBP20.59■□□□□ 0.89
GABPB1-212ENST00000615671 STK25O00506 426 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 DMP1Q13316 513 aaPredicted RBP20.59■□□□□ 0.89
GABPB1-212ENST00000615671 CEP128Q6ZU80 1094 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 PGBD1Q96JS3 809 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 ITSN2Q9NZM3 1697 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 YWHAEP62258 255 aaKnown RBP20.59■□□□□ 0.89
GABPB1-212ENST00000615671 LRRC24Q50LG9 513 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 TMEM191BP0C7N4 346 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 CERS3Q8IU89 383 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 UHMK1Q8TAS1 419 aaKnown RBP20.59■□□□□ 0.89
GABPB1-212ENST00000615671 SMYD2Q9NRG4 433 aa20.59■□□□□ 0.89
GABPB1-212ENST00000615671 PPP1R12AO14974 1030 aaPredicted RBP20.58■□□□□ 0.89
GABPB1-212ENST00000615671 BUB1BO60566 1050 aaPredicted RBP20.58■□□□□ 0.89
GABPB1-212ENST00000615671 PCDHA12Q9UN75 941 aa20.58■□□□□ 0.89
GABPB1-212ENST00000615671 RNASELQ05823 741 aaKnown RBP20.58■□□□□ 0.89
GABPB1-212ENST00000615671 ABCB5Q2M3G0 1257 aa20.58■□□□□ 0.89
GABPB1-212ENST00000615671 TTC31Q49AM3 519 aaPredicted RBP20.58■□□□□ 0.89
GABPB1-212ENST00000615671 INTS4Q96HW7 963 aaKnown RBP20.58■□□□□ 0.89
GABPB1-212ENST00000615671 ATP10BO94823 1461 aa20.58■□□□□ 0.89
GABPB1-212ENST00000615671 SPDYE2BA6NHP3 402 aa20.58■□□□□ 0.88
GABPB1-212ENST00000615671 GSTA1P08263 222 aa20.58■□□□□ 0.88
GABPB1-212ENST00000615671 GSTA2P09210 222 aa20.58■□□□□ 0.88
GABPB1-212ENST00000615671 SPDYE6P0CI01 402 aa20.58■□□□□ 0.88
GABPB1-212ENST00000615671 CASP2P42575 452 aa20.58■□□□□ 0.88
GABPB1-212ENST00000615671 EEF2KMTQ96G04 330 aa20.58■□□□□ 0.88
GABPB1-212ENST00000615671 XRCC5P13010 732 aaKnown RBP20.58■□□□□ 0.88
GABPB1-212ENST00000615671 TTBK2Q6IQ55 1244 aa20.58■□□□□ 0.88
GABPB1-212ENST00000615671 ATP2B4P23634 1241 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 IFNL3Q8IZI9 196 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 ZNF653Q96CK0 615 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 SLC39A2Q9NP94 309 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 ATL3Q6DD88 541 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 ARMCX5Q6P1M9 558 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 PPM1KQ8N3J5 372 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 LLPHQ9BRT6 129 aaKnown RBP20.57■□□□□ 0.88
GABPB1-212ENST00000615671 PABPC4Q13310 644 aaKnown RBP eCLIP20.57■□□□□ 0.88
GABPB1-212ENST00000615671 VSIG1Q86XK7 387 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 CEP120Q8N960 986 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 ATP8A2Q9NTI2 1148 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 KDM3AQ9Y4C1 1321 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 PCK1P35558 622 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 FOXD4Q12950 439 aaPredicted RBP20.57■□□□□ 0.88
GABPB1-212ENST00000615671 BLIDQ8IZY5 108 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 SYCE1Q8N0S2 351 aa20.57■□□□□ 0.88
GABPB1-212ENST00000615671 IFIH1Q9BYX4 1025 aaKnown RBP20.57■□□□□ 0.88
GABPB1-212ENST00000615671 TMTC4Q5T4D3 741 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 MIGA2Q7L4E1 593 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 TRIM56Q9BRZ2 755 aaKnown RBP20.56■□□□□ 0.88
GABPB1-212ENST00000615671 C1orf112Q9NSG2 853 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 NOC2LQ9Y3T9 749 aaKnown RBP20.56■□□□□ 0.88
GABPB1-212ENST00000615671 NUB1Q9Y5A7 615 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 KLRF2D3W0D1 207 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 PDE6CP51160 858 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 LGSNQ5TDP6 509 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 SLFN13Q68D06 897 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 TLR3O15455 904 aaKnown RBP20.56■□□□□ 0.88
GABPB1-212ENST00000615671 RAD17O75943 681 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 PPFIA1Q13136 1202 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 PNMA1Q8ND90 353 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 NT5C3AQ9H0P0 336 aa20.56■□□□□ 0.88
GABPB1-212ENST00000615671 SLC16A2P36021 539 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 ADCY8P40145 1251 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 KCTD2Q14681 263 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 SMC5Q8IY18 1101 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 CSRNP1Q96S65 589 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 SWAP70Q9UH65 585 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 SNAP25P60880 206 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 IL1RL1Q01638 556 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 DENND2CQ68D51 928 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 PHLDB2Q86SQ0 1253 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 STK38LQ9Y2H1 464 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 KCNK3O14649 394 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 OSTNP61366 133 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 MLKLQ8NB16 471 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 AMFRQ9UKV5 643 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 BNIP3LO60238 219 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 XPAP23025 273 aaPredicted RBP20.55■□□□□ 0.88
GABPB1-212ENST00000615671 TMOD1P28289 359 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
GABPB1-212ENST00000615671 HESX1Q9UBX0 185 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 RBBP5Q15291 538 aaKnown RBP20.55■□□□□ 0.88
GABPB1-212ENST00000615671 FAM178BQ8IXR5 827 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 MYOCDQ8IZQ8 938 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 AP5M1Q9H0R1 490 aa20.55■□□□□ 0.88
GABPB1-212ENST00000615671 EIF4A1P60842 406 aaKnown RBP20.54■□□□□ 0.88
GABPB1-212ENST00000615671 ZBTB33Q86T24 672 aa20.54■□□□□ 0.88
GABPB1-212ENST00000615671 SPATA17Q96L03 361 aa20.54■□□□□ 0.88
GABPB1-212ENST00000615671 OSBPP22059 807 aa20.54■□□□□ 0.88
GABPB1-212ENST00000615671 SEPT6Q14141 434 aa20.54■□□□□ 0.88
GABPB1-212ENST00000615671 MCF2L2Q86YR7 1114 aa20.54■□□□□ 0.88
GABPB1-212ENST00000615671 NDUFAB1O14561 156 aa20.54■□□□□ 0.88
GABPB1-212ENST00000615671 CASQ2O14958 399 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms