RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 XAGE2Q96GT9 111 aa8.48□□□□□ -1.05
MUC1-227ENST00000615517 GLT1D1Q96MS3 346 aa8.48□□□□□ -1.05
MUC1-227ENST00000615517 TRIM34Q9BYJ4 488 aa8.48□□□□□ -1.05
MUC1-227ENST00000615517 HOXC10Q9NYD6 342 aa8.48□□□□□ -1.05
MUC1-227ENST00000615517 ATG2AQ2TAZ0 1938 aa8.48□□□□□ -1.05
MUC1-227ENST00000615517 A0A1B0GUL7 405 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 A0A1W2PRG0 241 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 ZBBXA8MT70 800 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 CTAGE5O15320 804 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 TLR3O15455 904 aaKnown RBP8.47□□□□□ -1.05
MUC1-227ENST00000615517 SNAI1O95863 264 aaPredicted RBP8.47□□□□□ -1.05
MUC1-227ENST00000615517 FCER1AP12319 257 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
MUC1-227ENST00000615517 IL15P40933 162 aaPredicted RBP8.47□□□□□ -1.05
MUC1-227ENST00000615517 PPP4CP60510 307 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 FOXK2Q01167 660 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 PLS1Q14651 629 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 SPATA5Q8NB90 893 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 SLC43A3Q8NBI5 491 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 ATG4CQ96DT6 458 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 MMP19Q99542 508 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 NOC4LQ9BVI4 516 aaKnown RBP8.47□□□□□ -1.05
MUC1-227ENST00000615517 HIPK3Q9H422 1215 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 UBE2ZQ9H832 354 aaPredicted RBP8.47□□□□□ -1.05
MUC1-227ENST00000615517 DIS3Q9Y2L1 958 aaKnown RBP8.47□□□□□ -1.05
MUC1-227ENST00000615517 TANC1Q9C0D5 1861 aa8.47□□□□□ -1.05
MUC1-227ENST00000615517 DCXO43602 365 aa8.46□□□□□ -1.06
MUC1-227ENST00000615517 DUSP11O75319 330 aaKnown RBP8.46□□□□□ -1.06
MUC1-227ENST00000615517 C6orf222P0C671 652 aaPredicted RBP8.46□□□□□ -1.06
MUC1-227ENST00000615517 TMEM132BQ14DG7 1078 aa8.46□□□□□ -1.06
MUC1-227ENST00000615517 ABCB5Q2M3G0 1257 aa8.46□□□□□ -1.06
MUC1-227ENST00000615517 LEXMQ3ZCV2 418 aa8.46□□□□□ -1.06
MUC1-227ENST00000615517 VTI1AQ96AJ9 217 aa8.46□□□□□ -1.06
MUC1-227ENST00000615517 SCLYQ96I15 445 aa8.46□□□□□ -1.06
MUC1-227ENST00000615517 AGBL1Q96MI9 1066 aa8.46□□□□□ -1.06
MUC1-227ENST00000615517 TANGO6Q9C0B7 1094 aa8.46□□□□□ -1.06
MUC1-227ENST00000615517 UPF3AQ9H1J1 476 aaKnown RBP8.46□□□□□ -1.06
MUC1-227ENST00000615517 FAM184BQ9ULE4 1060 aa8.46□□□□□ -1.06
MUC1-227ENST00000615517 EPG5Q9HCE0 2579 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 BAG3O95817 575 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 HLA-DOAP06340 250 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 SHMT1P34896 483 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 MCAMP43121 646 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 GJA9P57773 515 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 DYNLL1P63167 89 aaKnown RBP8.45□□□□□ -1.06
MUC1-227ENST00000615517 DDX10Q13206 875 aaKnown RBP8.45□□□□□ -1.06
MUC1-227ENST00000615517 SEPT2Q15019 361 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 CERKLQ49MI3 558 aaPredicted RBP8.45□□□□□ -1.06
MUC1-227ENST00000615517 IER5LQ5T953 404 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 RPUSD2Q8IZ73 545 aaKnown RBP8.45□□□□□ -1.06
MUC1-227ENST00000615517 MB21D1Q8N884 522 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 PCSK9Q8NBP7 692 aaKnown RBP8.45□□□□□ -1.06
MUC1-227ENST00000615517 TRPV6Q9H1D0 765 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 CNPY2Q9Y2B0 182 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 GRIN2DO15399 1336 aa8.45□□□□□ -1.06
MUC1-227ENST00000615517 KMT2BQ9UMN6 2715 aaPredicted RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 GRXCR2A6NFK2 248 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 SLC25A27O95847 323 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 PLCG2P16885 1265 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 KCNA5P22460 613 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 ARID4AP29374 1257 aaPredicted RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 BEX3Q00994 111 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 TFCP2Q12800 502 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 MVPQ14764 893 aaKnown RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 GNASQ5JWF2 1037 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 PTCRAQ6ISU1 281 aaPredicted RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 NAA16Q6N069 864 aaPredicted RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 WDR63Q8IWG1 891 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 MRPL50Q8N5N7 158 aaKnown RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 GDPD5Q8WTR4 605 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 NOL10Q9BSC4 688 aaKnown RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 PRKRIP1Q9H875 184 aaPredicted RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 COPRSQ9NQ92 184 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 LRP2BPQ9P2M1 347 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 SERPINB13Q9UIV8 391 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 ZHX1Q9UKY1 873 aaPredicted RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 WDR87Q6ZQQ6 2873 aa8.44□□□□□ -1.06
MUC1-227ENST00000615517 TPRP12270 2363 aaKnown RBP8.44□□□□□ -1.06
MUC1-227ENST00000615517 GVINP1Q7Z2Y8 2422 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 B4GALT4O60513 344 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 FLOT1O75955 427 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 NKX3-2P78367 333 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 EVX2Q03828 476 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 TCF15Q12870 199 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 KCTD2Q14681 263 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 CCDC184Q52MB2 194 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 CXCL17Q6UXB2 119 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 MAMDC4Q6UXC1 1216 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 ATF7IPQ6VMQ6 1270 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 DEFB128Q7Z7B8 93 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 RIOX2Q8IUF8 465 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 SIAH1Q8IUQ4 282 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 EHD4Q9H223 541 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 ALG13Q9NP73 1137 aaKnown RBP8.43□□□□□ -1.06
MUC1-227ENST00000615517 CABP5Q9NP86 173 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 LMCD1Q9NZU5 365 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 ADAMTS5Q9UNA0 930 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 SALL2Q9Y467 1007 aaPredicted RBP8.43□□□□□ -1.06
MUC1-227ENST00000615517 ASTN1O14525 1302 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 NLRC5Q86WI3 1866 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms