RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 ATP2A1O14983 1001 aa14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 NDUFB10O96000 172 aa14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 GJC2Q5T442 439 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 ANKRD45Q5TZF3 282 aa14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 MSL3Q8N5Y2 521 aaKnown RBP14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 NEDD1Q8NHV4 660 aa14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 EVI5LQ96CN4 794 aa14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 MTMR4Q9NYA4 1195 aa14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 PRKAG2Q9UGJ0 569 aa14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 ZNF214Q9UL59 606 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 EYSQ5T1H1 3165 aa14.44□□□□□ -0.1
PDLIM2-218ENST00000614502 PPARAQ07869 468 aa14.43□□□□□ -0.1
PDLIM2-218ENST00000614502 HDAC1Q13547 482 aaPredicted RBP14.43□□□□□ -0.1
PDLIM2-218ENST00000614502 GMCL1P1Q8NEA9 526 aa14.43□□□□□ -0.1
PDLIM2-218ENST00000614502 REPS2Q8NFH8 660 aa14.43□□□□□ -0.1
PDLIM2-218ENST00000614502 DDX11Q96FC9 970 aa14.43□□□□□ -0.1
PDLIM2-218ENST00000614502 LBHD1Q9BQE6 289 aaPredicted RBP14.43□□□□□ -0.1
PDLIM2-218ENST00000614502 FBXO40Q9UH90 709 aa14.43□□□□□ -0.1
PDLIM2-218ENST00000614502 STXBP5LQ9Y2K9 1186 aa14.43□□□□□ -0.1
PDLIM2-218ENST00000614502 PRDM1O75626 825 aa14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 RARBP10826 455 aa14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 OAZ1P54368 228 aa14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 RTP1P59025 263 aa14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 ZNF792Q3KQV3 632 aa14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 PRAMEF19Q5SWL8 479 aa14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 SNRNP48Q6IEG0 339 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 CEP95Q96GE4 821 aa14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 SEC62Q99442 399 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 TINF2Q9BSI4 451 aa14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 CNPY2Q9Y2B0 182 aa14.42□□□□□ -0.1
PDLIM2-218ENST00000614502 SALL3Q9BXA9 1300 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 BMP3P12645 472 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 AKR1A1P14550 325 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 TFAP4Q01664 338 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 RNF180Q86T96 592 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 FAM160B2Q86V87 743 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 CHST13Q8NET6 341 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 CHURC1Q8WUH1 139 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 FAM161BQ96MY7 647 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 NUP88Q99567 741 aaPredicted RBP14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 HELLSQ9NRZ9 838 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 SYNGAP1Q96PV0 1343 aa14.41□□□□□ -0.1
PDLIM2-218ENST00000614502 PRUNE2Q8WUY3 3088 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 TSPY2A6NKD2 308 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 PGK2P07205 417 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 STAT2P52630 851 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 PDE1AP54750 535 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 LRRC41Q15345 812 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 SLFN13Q68D06 897 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 SLC39A5Q6ZMH5 540 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 ZNF467Q7Z7K2 595 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 CPXCR1Q8N123 301 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 OTUD7AQ8TE49 926 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 KIFC2Q96AC6 838 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 GUCD1Q96NT3 240 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 SLC38A10Q9HBR0 1119 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 XPNPEP3Q9NQH7 507 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 ATP11BQ9Y2G3 1177 aa14.4□□□□□ -0.1
PDLIM2-218ENST00000614502 PLA2G6O60733 806 aa14.39□□□□□ -0.11
PDLIM2-218ENST00000614502 ALX1Q15699 326 aa14.39□□□□□ -0.11
PDLIM2-218ENST00000614502 C1orf53Q5VUE5 145 aa14.39□□□□□ -0.11
PDLIM2-218ENST00000614502 MAMDC4Q6UXC1 1216 aa14.39□□□□□ -0.11
PDLIM2-218ENST00000614502 GMCL1Q96IK5 515 aa14.39□□□□□ -0.11
PDLIM2-218ENST00000614502 RWDD1Q9H446 243 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-218ENST00000614502 ANAPC4Q9UJX5 808 aa14.39□□□□□ -0.11
PDLIM2-218ENST00000614502 ISY1Q9ULR0 285 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-218ENST00000614502 MCM3APO60318 1980 aa14.39□□□□□ -0.11
PDLIM2-218ENST00000614502 CDH23Q9H251 3354 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 SLC1A4P43007 532 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 MFAP1P55081 439 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 IKQ13123 557 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 TKFCQ3LXA3 575 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 TRIM60Q495X7 471 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 FAM47AQ5JRC9 791 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 C9orf50Q5SZB4 431 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 LRRC47Q8N1G4 583 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 ANKRD35Q8N283 1001 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 STAG1Q8WVM7 1258 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 FERMT2Q96AC1 680 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 RAVER2Q9HCJ3 691 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 PRDM5Q9NQX1 630 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 FAM184BQ9ULE4 1060 aa14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDLIM2-218ENST00000614502 DNAJC25-GNG10A0A024R161 153 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 TMEM232C9JQI7 657 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 ZNF865P0CJ78 1059 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 ADCYAP1R1P41586 468 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 SLC4A3P48751 1232 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 SNX17Q15036 470 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 SHHQ15465 462 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 MCMDC2Q4G0Z9 681 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 SH3RF1Q7Z6J0 888 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 TSEN34Q9BSV6 310 aaKnown RBP14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 ABHD16BQ9H3Z7 469 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 ACAD9Q9H845 621 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 STX8Q9UNK0 236 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms