RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 LRRC8AQ8IWT6 810 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 OGFOD1Q8N543 542 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 NUP88Q99567 741 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 SPON1Q9HCB6 807 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 ZNF70Q9UC06 446 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 KCNG1Q9UIX4 513 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 CD2APQ9Y5K6 639 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 USP27XA6NNY8 438 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 POLR3GO15318 223 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 IFNAR1P17181 557 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 PLA2G4AP47712 749 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 GMPSP49915 693 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 KRT85P78386 507 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 RASGRP4Q8TDF6 673 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 DNAJC25Q9H1X3 360 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 KCND1Q9NSA2 647 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 SUGT1Q9Y2Z0 365 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 ROBO3Q96MS0 1386 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 PNMA6AP0CW24 399 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 MARCKSP29966 332 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 ZNF165P49910 485 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 KIF23Q02241 960 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 SEPT2Q15019 361 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 CIAPIN1Q6FI81 312 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 KCTD1Q719H9 257 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 SPICE1Q8N0Z3 855 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 LEO1Q8WVC0 666 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 SYT17Q9BSW7 474 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 MYH6P13533 1939 aa11.33□□□□□ -0.59
GGA3-221ENST00000614198 DNAH12Q6ZR08 3092 aa11.33□□□□□ -0.6
GGA3-221ENST00000614198 KIF2AO00139 706 aaPredicted RBP11.33□□□□□ -0.6
GGA3-221ENST00000614198 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
GGA3-221ENST00000614198 MICALL2Q8IY33 904 aa11.33□□□□□ -0.6
GGA3-221ENST00000614198 SPATA32Q96LK8 384 aa11.33□□□□□ -0.6
GGA3-221ENST00000614198 MYH8P13535 1937 aa11.33□□□□□ -0.6
GGA3-221ENST00000614198 CNTNAP1P78357 1384 aa11.33□□□□□ -0.6
GGA3-221ENST00000614198 ZYXQ15942 572 aaKnown RBP11.33□□□□□ -0.6
GGA3-221ENST00000614198 SPECC1Q5M775 1068 aa11.33□□□□□ -0.6
GGA3-221ENST00000614198 MYOZ2Q9NPC6 264 aa11.33□□□□□ -0.6
GGA3-221ENST00000614198 TPM4P67936 248 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 TMTC3Q6ZXV5 915 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 SIAH1Q8IUQ4 282 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 L2HGDHQ9H9P8 463 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 MTMR4Q9NYA4 1195 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 CNTNAP5Q8WYK1 1306 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 ECE1P42892 770 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 CLCN6P51797 869 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 RBM43Q6ZSC3 357 aaKnown RBP11.32□□□□□ -0.6
GGA3-221ENST00000614198 NEDD1Q8NHV4 660 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
GGA3-221ENST00000614198 GLIS2Q9BZE0 524 aaPredicted RBP11.32□□□□□ -0.6
GGA3-221ENST00000614198 DDNO94850 711 aaPredicted RBP11.32□□□□□ -0.6
GGA3-221ENST00000614198 PRKG1Q13976 671 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 ZRSR1Q15695 479 aaKnown RBP11.32□□□□□ -0.6
GGA3-221ENST00000614198 SYT10Q6XYQ8 523 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 TMTC2Q8N394 836 aa11.32□□□□□ -0.6
GGA3-221ENST00000614198 ZRANB2O95218 330 aaKnown RBP eCLIP11.31□□□□□ -0.6
GGA3-221ENST00000614198 GH2P01242 217 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 SKILP12757 684 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 EPS15P42566 896 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 GRIN1Q05586 938 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 GNL2Q13823 731 aaKnown RBP11.31□□□□□ -0.6
GGA3-221ENST00000614198 ARID5BQ14865 1188 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 CERKLQ49MI3 558 aaPredicted RBP11.31□□□□□ -0.6
GGA3-221ENST00000614198 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
GGA3-221ENST00000614198 NEK11Q8NG66 645 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 UIMC1Q96RL1 719 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 IDI2Q9BXS1 227 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 CNOT7Q9UIV1 285 aaKnown RBP11.31□□□□□ -0.6
GGA3-221ENST00000614198 CEP350Q5VT06 3117 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 MMP14P50281 582 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 KIAA1755Q5JYT7 1200 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 CCAR2Q8N163 923 aaKnown RBP11.31□□□□□ -0.6
GGA3-221ENST00000614198 GPATCH11Q8N954 259 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 TRPM4Q8TD43 1214 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 GOLPH3LQ9H4A5 285 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 ELP1O95163 1332 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 A0A1W2PRG0 241 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 KLRF2D3W0D1 207 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 EEF2P13639 858 aaKnown RBP11.31□□□□□ -0.6
GGA3-221ENST00000614198 ERCC6LQ2NKX8 1250 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 SARM1Q6SZW1 724 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 KRBA2Q6ZNG9 492 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 DGKHQ86XP1 1220 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 PI4KBQ9UBF8 816 aa11.31□□□□□ -0.6
GGA3-221ENST00000614198 NR1I2O75469 434 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 CAVIN2O95810 425 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 CASQ1P31415 396 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 TOB1P50616 345 aaPredicted RBP11.3□□□□□ -0.6
GGA3-221ENST00000614198 TRIM22Q8IYM9 498 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 MRFAP1L1Q96HT8 127 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 MYO1CO00159 1063 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 NPY5RQ15761 445 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms