RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 NAPAP54920 295 aa20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 CFAP100Q494V2 611 aa20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 HOMER1Q86YM7 354 aa20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 AOPEPQ8N6M6 819 aa20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 ZNF713Q8N859 430 aaPredicted RBP20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 FRMPD2Q68DX3 1309 aaPredicted RBP20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 GOLGA6L6A8MZA4 724 aa20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 MDM2Q00987 491 aaPredicted RBP20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 KANK3Q6NY19 840 aa20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 USP49Q70CQ1 688 aa20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 SH3BP5LQ7L8J4 393 aa20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 RASGRP4Q8TDF6 673 aa20.41■□□□□ 0.86
SEMA6C-209ENST00000613223 COL2A1P02458 1487 aaPredicted RBP20.4■□□□□ 0.86
SEMA6C-209ENST00000613223 ATRNL1Q5VV63 1379 aa20.4■□□□□ 0.86
SEMA6C-209ENST00000613223 ACTN4O43707 911 aaKnown RBP20.4■□□□□ 0.86
SEMA6C-209ENST00000613223 ENTPD3O75355 529 aa20.4■□□□□ 0.86
SEMA6C-209ENST00000613223 MCM7P33993 719 aa20.4■□□□□ 0.86
SEMA6C-209ENST00000613223 ZSCAN29Q8IWY8 852 aaPredicted RBP20.4■□□□□ 0.86
SEMA6C-209ENST00000613223 PIGSQ96S52 555 aa20.4■□□□□ 0.86
SEMA6C-209ENST00000613223 SERTAD1Q9UHV2 236 aa20.4■□□□□ 0.86
SEMA6C-209ENST00000613223 GNA11P29992 359 aa20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 ZNF543Q08ER8 600 aa20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 POSTNQ15063 836 aa20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 ARL6IP4Q66PJ3 421 aaKnown RBP20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 RSBN1LQ6PCB5 846 aaPredicted RBP20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 FOXP4Q8IVH2 680 aaPredicted RBP20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 LARGE2Q8N3Y3 721 aa20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 SYMPKQ92797 1274 aaKnown RBP20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 TRIM34Q9BYJ4 488 aa20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 UBA5Q9GZZ9 404 aa20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 C6orf50Q9HD87 102 aa20.39■□□□□ 0.86
SEMA6C-209ENST00000613223 MYH4Q9Y623 1939 aa20.39■□□□□ 0.85
SEMA6C-209ENST00000613223 ESYT2A0FGR8 921 aa20.39■□□□□ 0.85
SEMA6C-209ENST00000613223 CCDC34Q96HJ3 373 aa20.39■□□□□ 0.85
SEMA6C-209ENST00000613223 EPSTI1Q96J88 318 aa20.39■□□□□ 0.85
SEMA6C-209ENST00000613223 VPS33BQ9H267 617 aa20.39■□□□□ 0.85
SEMA6C-209ENST00000613223 TDRD3Q9H7E2 651 aaKnown RBP20.39■□□□□ 0.85
SEMA6C-209ENST00000613223 VAT1LQ9HCJ6 419 aa20.39■□□□□ 0.85
SEMA6C-209ENST00000613223 VWA3AA6NCI4 1184 aa20.38■□□□□ 0.85
SEMA6C-209ENST00000613223 GTF2F1P35269 517 aaKnown RBP eCLIP20.38■□□□□ 0.85
SEMA6C-209ENST00000613223 CERKLQ49MI3 558 aaPredicted RBP20.38■□□□□ 0.85
SEMA6C-209ENST00000613223 SOGA3Q5TF21 947 aa20.38■□□□□ 0.85
SEMA6C-209ENST00000613223 TATDN1Q6P1N9 297 aa20.38■□□□□ 0.85
SEMA6C-209ENST00000613223 PDILTQ8N807 584 aa20.38■□□□□ 0.85
SEMA6C-209ENST00000613223 PCDHA5Q9Y5H7 936 aa20.38■□□□□ 0.85
SEMA6C-209ENST00000613223 SMCO2A6NFE2 343 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 FOXN1O15353 648 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 SLURP2P0DP57 97 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 CDC25BP30305 580 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 GPATCH4Q5T3I0 446 aaKnown RBP20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 KRT25Q7Z3Z0 450 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 KIAA1524Q8TCG1 905 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 PRMT6Q96LA8 375 aaPredicted RBP20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 ZNF277Q9NRM2 450 aaPredicted RBP20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 COL4A5P29400 1685 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 VIL1P09327 827 aaKnown RBP20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 NT5DC1Q5TFE4 455 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 C4orf32Q8N8J7 132 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 SPC24Q8NBT2 197 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 GPCPD1Q9NPB8 672 aa20.37■□□□□ 0.85
SEMA6C-209ENST00000613223 FAM196BA6NMK8 535 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 SMTNL1A8MU46 457 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 PSMD14O00487 310 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 ATP2B2Q01814 1243 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 INF2Q27J81 1249 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 MKL1Q969V6 931 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 MRFAP1L1Q96HT8 127 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 GMLQ99445 158 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 KCNF1Q9H3M0 494 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 KANSL2Q9H9L4 492 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 NYAP2Q9P242 653 aa20.36■□□□□ 0.85
SEMA6C-209ENST00000613223 A0A087X0B3 334 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 SPDYE2BA6NHP3 402 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 IKBKBO14920 756 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 SLFN14P0C7P3 912 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 SPDYE6P0CI01 402 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 ISM2Q6H9L7 571 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 DHX58Q96C10 678 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 PYM1Q9BRP8 204 aaKnown RBP20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 TMOD2Q9NZR1 351 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 HDAC9Q9UKV0 1011 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 RAD17O75943 681 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 PRR29P0C7W0 189 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 LONP1P36776 959 aaKnown RBP20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 TPM4P67936 248 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 NONOQ15233 471 aaKnown RBP eCLIP20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 IL17AQ16552 155 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 CCDC96Q2M329 555 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 TMEM179Q6ZVK1 233 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 C17orf53Q8N3J3 647 aaPredicted RBP20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 SMARCE1Q969G3 411 aa20.35■□□□□ 0.85
SEMA6C-209ENST00000613223 LAD1O00515 517 aa20.34■□□□□ 0.85
SEMA6C-209ENST00000613223 SARSP49591 514 aaKnown RBP20.34■□□□□ 0.85
SEMA6C-209ENST00000613223 TGFB2P61812 414 aa20.34■□□□□ 0.85
SEMA6C-209ENST00000613223 PPP1R18Q6NYC8 613 aa20.34■□□□□ 0.85
SEMA6C-209ENST00000613223 DRC7Q8IY82 874 aa20.34■□□□□ 0.85
SEMA6C-209ENST00000613223 TRIML1Q8N9V2 468 aa20.34■□□□□ 0.85
SEMA6C-209ENST00000613223 JMJD4Q9H9V9 463 aa20.34■□□□□ 0.85
SEMA6C-209ENST00000613223 MAN1B1Q9UKM7 699 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms