RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 FGRP09769 529 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 TOP1P11387 765 aaKnown RBP14.52□□□□□ -0.08
CBWD3-208ENST00000612050 SLC4A3P48751 1232 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 TMEM132BQ14DG7 1078 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 CCDC96Q2M329 555 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 RIOX2Q8IUF8 465 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 TRIB2Q92519 343 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 DEFB118Q96PH6 123 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 HTATIP2Q9BUP3 242 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 TCP11L1Q9NUJ3 509 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 ADAMTS5Q9UNA0 930 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 MTMR7Q9Y216 660 aa14.52□□□□□ -0.08
CBWD3-208ENST00000612050 COL11A1P12107 1806 aaPredicted RBP14.52□□□□□ -0.08
CBWD3-208ENST00000612050 RLFQ13129 1914 aa14.51□□□□□ -0.09
CBWD3-208ENST00000612050 TMEM232C9JQI7 657 aa14.51□□□□□ -0.09
CBWD3-208ENST00000612050 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
CBWD3-208ENST00000612050 ADORA2AP29274 412 aa14.51□□□□□ -0.09
CBWD3-208ENST00000612050 OAZ1P54368 228 aa14.51□□□□□ -0.09
CBWD3-208ENST00000612050 SNRNP48Q6IEG0 339 aaKnown RBP14.51□□□□□ -0.09
CBWD3-208ENST00000612050 CPXCR1Q8N123 301 aa14.51□□□□□ -0.09
CBWD3-208ENST00000612050 DCAF4Q8WV16 495 aa14.51□□□□□ -0.09
CBWD3-208ENST00000612050 UBAC1Q9BSL1 405 aa14.51□□□□□ -0.09
CBWD3-208ENST00000612050 FBXO40Q9UH90 709 aa14.51□□□□□ -0.09
CBWD3-208ENST00000612050 ZNF236Q9UL36 1845 aa14.51□□□□□ -0.09
CBWD3-208ENST00000612050 MSCO60682 206 aa14.5□□□□□ -0.09
CBWD3-208ENST00000612050 HOXC6P09630 235 aa14.5□□□□□ -0.09
CBWD3-208ENST00000612050 MCCP23508 829 aa14.5□□□□□ -0.09
CBWD3-208ENST00000612050 CHMLP26374 656 aa14.5□□□□□ -0.09
CBWD3-208ENST00000612050 RCSD1Q6JBY9 416 aa14.5□□□□□ -0.09
CBWD3-208ENST00000612050 USP6NLQ92738 828 aa14.5□□□□□ -0.09
CBWD3-208ENST00000612050 DDX11Q96FC9 970 aa14.5□□□□□ -0.09
CBWD3-208ENST00000612050 INCENPQ9NQS7 918 aa14.5□□□□□ -0.09
CBWD3-208ENST00000612050 PAK6Q9NQU5 681 aaPredicted RBP14.5□□□□□ -0.09
CBWD3-208ENST00000612050 PNMA2Q9UL42 364 aa14.5□□□□□ -0.09
CBWD3-208ENST00000612050 ERICH2A1L162 156 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 NMT2O60551 498 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 FARP2O94887 1054 aaPredicted RBP14.49□□□□□ -0.09
CBWD3-208ENST00000612050 CNGA1P29973 690 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 POTEEQ6S8J3 1075 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 RALYLQ86SE5 291 aaKnown RBP14.49□□□□□ -0.09
CBWD3-208ENST00000612050 ANKLE1Q8NAG6 615 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 KAT14Q9H8E8 782 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 IL17RBQ9NRM6 502 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 KIAA0100Q14667 2235 aaKnown RBP14.49□□□□□ -0.09
CBWD3-208ENST00000612050 ATP2A1O14983 1001 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 PLA2G6O60733 806 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 SART3Q15020 963 aaKnown RBP14.49□□□□□ -0.09
CBWD3-208ENST00000612050 OLFML2BQ68BL8 750 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 DGKHQ86XP1 1220 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 TBC1D10CQ8IV04 446 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 CHST13Q8NET6 341 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 SLC38A10Q9HBR0 1119 aa14.49□□□□□ -0.09
CBWD3-208ENST00000612050 ZNF214Q9UL59 606 aaPredicted RBP14.49□□□□□ -0.09
CBWD3-208ENST00000612050 KDM4AO75164 1064 aa14.48□□□□□ -0.09
CBWD3-208ENST00000612050 CACNB2Q08289 660 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-208ENST00000612050 CCL14Q16627 93 aa14.48□□□□□ -0.09
CBWD3-208ENST00000612050 TKFCQ3LXA3 575 aa14.48□□□□□ -0.09
CBWD3-208ENST00000612050 KCTD1Q719H9 257 aa14.48□□□□□ -0.09
CBWD3-208ENST00000612050 ANKRD35Q8N283 1001 aa14.48□□□□□ -0.09
CBWD3-208ENST00000612050 TMEM47Q9BQJ4 181 aa14.48□□□□□ -0.09
CBWD3-208ENST00000612050 RAVER2Q9HCJ3 691 aaKnown RBP14.48□□□□□ -0.09
CBWD3-208ENST00000612050 DIS3Q9Y2L1 958 aaKnown RBP14.48□□□□□ -0.09
CBWD3-208ENST00000612050 NEDD4P46934 1319 aa14.47□□□□□ -0.09
CBWD3-208ENST00000612050 B4E1Z4 1266 aa14.47□□□□□ -0.09
CBWD3-208ENST00000612050 GPATCH4Q5T3I0 446 aaKnown RBP14.47□□□□□ -0.09
CBWD3-208ENST00000612050 MAP3K21Q5TCX8 1036 aa14.47□□□□□ -0.09
CBWD3-208ENST00000612050 PRPF38BQ5VTL8 546 aaKnown RBP14.47□□□□□ -0.09
CBWD3-208ENST00000612050 NECAB2Q7Z6G3 386 aa14.47□□□□□ -0.09
CBWD3-208ENST00000612050 DPF3Q92784 378 aa14.47□□□□□ -0.09
CBWD3-208ENST00000612050 CHMP4CQ96CF2 233 aa14.47□□□□□ -0.09
CBWD3-208ENST00000612050 ZSCAN10Q96SZ4 725 aaPredicted RBP14.47□□□□□ -0.09
CBWD3-208ENST00000612050 ZNFX1Q9P2E3 1918 aaKnown RBP14.46□□□□□ -0.09
CBWD3-208ENST00000612050 SGSM2O43147 1006 aa14.46□□□□□ -0.09
CBWD3-208ENST00000612050 NOVP48745 357 aa14.46□□□□□ -0.09
CBWD3-208ENST00000612050 TRIM32Q13049 653 aa14.46□□□□□ -0.09
CBWD3-208ENST00000612050 BMP2KLQ5H9B9 411 aa14.46□□□□□ -0.09
CBWD3-208ENST00000612050 REPS2Q8NFH8 660 aa14.46□□□□□ -0.09
CBWD3-208ENST00000612050 NPLOC4Q8TAT6 608 aa14.46□□□□□ -0.09
CBWD3-208ENST00000612050 ZKSCAN3Q9BRR0 538 aa14.46□□□□□ -0.09
CBWD3-208ENST00000612050 ACAD9Q9H845 621 aa14.46□□□□□ -0.09
CBWD3-208ENST00000612050 CNPY2Q9Y2B0 182 aa14.46□□□□□ -0.09
CBWD3-208ENST00000612050 CYP2C19P33261 490 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 IFIT1BQ5T764 474 aaKnown RBP14.45□□□□□ -0.1
CBWD3-208ENST00000612050 SYDE2Q5VT97 1194 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 CCDC174Q6PII3 467 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 MSL3Q8N5Y2 521 aaKnown RBP14.45□□□□□ -0.1
CBWD3-208ENST00000612050 PNMA1Q8ND90 353 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 NCOA7Q8NI08 942 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 SHISA4Q96DD7 197 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 MAML3Q96JK9 1138 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 CRISPLD2Q9H0B8 497 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 GPCPD1Q9NPB8 672 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 HOMER2Q9NSB8 354 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 NRBP1Q9UHY1 535 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 CCPG1Q9ULG6 757 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 PRR12Q9ULL5 1215 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 NR2E3Q9Y5X4 410 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 HTTP42858 3142 aa14.45□□□□□ -0.1
CBWD3-208ENST00000612050 PLXNA1Q9UIW2 1896 aa14.44□□□□□ -0.1
CBWD3-208ENST00000612050 DHX16O60231 1041 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms