RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 NLRC4Q9NPP4 1024 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 HDAC9Q9UKV0 1011 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 CNOT6LQ96LI5 555 aaKnown RBP12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 IQCGQ9H095 443 aaKnown RBP12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 E7EVH7 732 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 PPP2R5EQ16537 467 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 GRAMD1CQ8IYS0 662 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 AK8Q96MA6 479 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 DNM3Q9UQ16 869 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 SPOPO43791 374 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 TRIM7Q9C029 511 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 HOMER2Q9NSB8 354 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 RRP15Q9Y3B9 282 aaKnown RBP12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 ADGRB2O60241 1585 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 MFAP3LO75121 409 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 EEF2P13639 858 aaKnown RBP12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 DAAM2Q86T65 1068 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 BCAS4Q8TDM0 211 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 KIFAP3Q92845 792 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 RABEP2Q9H5N1 569 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 TFCP2L1Q9NZI6 479 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 A0A1B0GUA9 196 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 USP27XA6NNY8 438 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 NR5A1Q13285 461 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 PAGE5Q96GU1 130 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 FAN1Q9Y2M0 1017 aa12.08□□□□□ -0.48
CDC42EP3-206ENST00000611976 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 RNF40O75150 1001 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 PTPN21Q16825 1174 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 NELFCDQ8IXH7 590 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 CCDC170Q8IYT3 715 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 ANKRD7Q92527 254 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 RBM17Q96I25 401 aaKnown RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 AIFM3Q96NN9 605 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 IMPG2Q9BZV3 1241 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 THAP9Q9H5L6 903 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 ATP8A2Q9NTI2 1148 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 ZSWIM5Q9P217 1185 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 PCDHA4Q9UN74 947 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 PCDHB6Q9Y5E3 794 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 B4DLN1 442 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 PTPREP23469 700 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 EPHB4P54760 987 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 CHRNDQ07001 517 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 MB21D2Q8IYB1 491 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 ACRBPQ8NEB7 543 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 OVOS2A0A0J9YW53 1432 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 OVOS2Q6IE36 1432 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 UFL1O94874 794 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 CTNNA1P35221 906 aaKnown RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 TECP42680 631 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 SMYD4Q8IYR2 804 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 PARP2Q9UGN5 583 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 PTPRUQ92729 1446 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 HOXA7P31268 230 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 GYG1P46976 350 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 IQCB1Q15051 598 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 KRT71Q3SY84 523 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 INTS8Q75QN2 995 aaKnown RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 P2RX5Q93086 422 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 BIN2Q9UBW5 565 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 KAT6BQ8WYB5 2073 aa12.07□□□□□ -0.48
CDC42EP3-206ENST00000611976 CEP85LQ5SZL2 805 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 USPL1Q5W0Q7 1092 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 NCAPH2Q6IBW4 605 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 PI16Q6UXB8 463 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 MAPKAPK5Q8IW41 473 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 TGFBRAP1Q8WUH2 860 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 EYA3Q99504 573 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 ENC1O14682 589 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 NDUFA10O95299 355 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 ALDH3A1P30838 453 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 GUCY2FP51841 1108 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 CC2D1AQ6P1N0 951 aaPredicted RBP12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 CNBD1Q8NA66 436 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 TBC1D7Q9P0N9 293 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 AMFRQ9UKV5 643 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 EFCAB13Q8IY85 973 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 FERMT1Q9BQL6 677 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 NEBLO76041 1014 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 RCAN1P53805 252 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 CASP8Q14790 479 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 PPP1R14CQ8TAE6 165 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 TRIM31Q9BZY9 425 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 CTTNBP2NLQ9P2B4 639 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 RNF14Q9UBS8 474 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 GGA1Q9UJY5 639 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 PIK3C2BO00750 1634 aa12.06□□□□□ -0.48
CDC42EP3-206ENST00000611976 XRCC5P13010 732 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms