RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 NBPF3Q9H094 633 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 SERPINB13Q9UIV8 391 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 PEAK1Q9H792 1746 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 LAD1O00515 517 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 ATP2C1P98194 919 aaPredicted RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 DRC1Q96MC2 740 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 CD209Q9NNX6 404 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 ANAPC4Q9UJX5 808 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 SPDYE3A6NKU9 549 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 SRBD1Q8N5C6 995 aaKnown RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 NEDD1Q8NHV4 660 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 PIGSQ96S52 555 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 ITSN1Q15811 1721 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 MYL1P05976 194 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 RHOXF2BP0C7M4 288 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 MCM3P25205 808 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 FMR1Q06787 632 aaKnown RBP eCLIP7.14□□□□□ -1.27
SNX13-213ENST00000611725 TUBB2AQ13885 445 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 SBK1Q52WX2 424 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 HERC4Q5GLZ8 1057 aaPredicted RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 SLC10A5Q5PT55 438 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 NYAP1Q6ZVC0 841 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 LRRC47Q8N1G4 583 aaKnown RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 AK8Q96MA6 479 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 GPR101Q96P66 508 aaPredicted RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 RHOXF2Q9BQY4 288 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 TUBB2BQ9BVA1 445 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 CUEDC2Q9H467 287 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 TEX33O43247 280 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 COBLO75128 1261 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 PRR29P0C7W0 189 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 FBXO38Q6PIJ6 1188 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 USP17L2Q6R6M4 530 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 LEKR1Q6ZMV7 388 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 NLGN1Q8N2Q7 840 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 MAGEF1Q9HAY2 307 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 FAM207AQ9NSI2 230 aaPredicted RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 MATR3P43243 847 aaKnown RBP eCLIP7.13□□□□□ -1.275e-6■■■■□ 24.5
SNX13-213ENST00000611725 TOB1P50616 345 aaPredicted RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 TXNRD3Q86VQ6 643 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 NAP1L4Q99733 375 aaKnown RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 DISC1Q9NRI5 854 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 USP40Q9NVE5 1235 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 EPN1Q9Y6I3 576 aaPredicted RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 SLIT3O75094 1523 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 CCNE1P24864 410 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 KLRK1P26718 216 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 CKAP4Q07065 602 aaKnown RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 KRT31Q15323 416 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 CWC15Q9P013 229 aaKnown RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 PHLPP2Q6ZVD8 1323 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 TECP42680 631 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 CALCRLQ16602 461 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 RC3H1Q5TC82 1133 aaKnown RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 C3orf67Q6ZVT6 689 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 CDC23Q9UJX2 597 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 VIRMAQ69YN4 1812 aaKnown RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 CAMTA1Q9Y6Y1 1673 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 MON2Q7Z3U7 1717 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 SPATA31A5Q5VU36 1347 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 SPATA31A7Q8IWB4 1347 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 ERCC3P19447 782 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 RBL2Q08999 1139 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 TBCKQ8TEA7 893 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 RABGGTAQ92696 567 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 TEKT1Q969V4 418 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 NUP58Q9BVL2 599 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 MACROD2A1Z1Q3 448 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 MFAP3LO75121 409 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 FAM26FQ5R3K3 315 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 ZNF658Q5TYW1 1059 aaPredicted RBP7.13□□□□□ -1.27
SNX13-213ENST00000611725 NEK11Q8NG66 645 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 MAP3K14Q99558 947 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 TUBGCP2Q9BSJ2 902 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 RWDD2AQ9UIY3 292 aa7.13□□□□□ -1.27
SNX13-213ENST00000611725 PIK3C2AO00443 1686 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 SETD1BQ9UPS6 1966 aaKnown RBP7.12□□□□□ -1.27
SNX13-213ENST00000611725 ADRA2BP18089 450 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 MAGEA1P43355 309 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 CDK8P49336 464 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 GPATCH4Q5T3I0 446 aaKnown RBP7.12□□□□□ -1.27
SNX13-213ENST00000611725 TMC4Q7Z404 712 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 SH3RF3Q8TEJ3 882 aaPredicted RBP7.12□□□□□ -1.27
SNX13-213ENST00000611725 MYO5BQ9ULV0 1848 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 hCG_1984214I3L0E3 225 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 KIAA0825Q8IV33 1275 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 ELOA2Q8IYF1 753 aaPredicted RBP7.12□□□□□ -1.27
SNX13-213ENST00000611725 ZNF713Q8N859 430 aaPredicted RBP7.12□□□□□ -1.27
SNX13-213ENST00000611725 LINC00116Q8NCU8 138 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 PANX2Q96RD6 677 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 DDX41Q9UJV9 622 aaKnown RBP7.12□□□□□ -1.27
SNX13-213ENST00000611725 ANKRD26Q9UPS8 1709 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 PHACTR2O75167 634 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 SCNN1DP51172 638 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 HAUS3Q68CZ6 603 aa7.12□□□□□ -1.27
SNX13-213ENST00000611725 DHTKD1Q96HY7 919 aaPredicted RBP7.12□□□□□ -1.27
SNX13-213ENST00000611725 CCDC17Q96LX7 622 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms