RNA–Protein interactions for RNA: ENST00000611390.1

CDK13-206, Transcript of cyclin dependent kinase 13, humanhuman

TSL 5 BASIC

Gene CDK13, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-206ENST00000611390 DBNDD1Q9H9R9 158 aa13.6□□□□□ -0.23
CDK13-206ENST00000611390 SEC63Q9UGP8 760 aaKnown RBP13.6□□□□□ -0.23
CDK13-206ENST00000611390 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 USP17L5A8MUK1 530 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 ERCC5P28715 1186 aaPredicted RBP13.59□□□□□ -0.23
CDK13-206ENST00000611390 CCZ1BP86790 482 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 CCZ1P86791 482 aaPredicted RBP13.59□□□□□ -0.23
CDK13-206ENST00000611390 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 KRT25Q7Z3Z0 450 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 TMC6Q7Z403 805 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 EHD4Q9H223 541 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 CPVLQ9H3G5 476 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 FANCLQ9NW38 375 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 LAD1O00515 517 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 GNA11P29992 359 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 SHMT1P34896 483 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 AFMP43652 599 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 UBASH3AP57075 661 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 HDLBPQ00341 1268 aaKnown RBP13.59□□□□□ -0.23
CDK13-206ENST00000611390 INF2Q27J81 1249 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 CNKSR1Q969H4 720 aa13.59□□□□□ -0.23
CDK13-206ENST00000611390 ADAMTSL1Q8N6G6 1762 aa13.58□□□□□ -0.23
CDK13-206ENST00000611390 TTLL1O95922 423 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 SERPINC1P01008 464 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 SKILP12757 684 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 TXLNAP40222 546 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 PRPHP41219 470 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 FMR1Q06787 632 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDK13-206ENST00000611390 PDXDC2PQ6P474 469 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 HOMER1Q86YM7 354 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 PIGSQ96S52 555 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 SMCO2A6NFE2 343 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 ECE2O60344 883 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 ZNF18P17022 549 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 NONOQ15233 471 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDK13-206ENST00000611390 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 DACT2Q5SW24 774 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 CCDC17Q96LX7 622 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.24
CDK13-206ENST00000611390 NFE2L3Q9Y4A8 694 aa13.58□□□□□ -0.24
CDK13-206ENST00000611390 UQCRHLA0A096LP55 91 aa13.57□□□□□ -0.24
CDK13-206ENST00000611390 UQCRHP07919 91 aa13.57□□□□□ -0.24
CDK13-206ENST00000611390 NFIAQ12857 509 aa13.57□□□□□ -0.24
CDK13-206ENST00000611390 SLC15A2Q16348 729 aa13.57□□□□□ -0.24
CDK13-206ENST00000611390 DTHD1Q6ZMT9 781 aa13.57□□□□□ -0.24
CDK13-206ENST00000611390 LRRC47Q8N1G4 583 aaKnown RBP13.57□□□□□ -0.24
CDK13-206ENST00000611390 DPF2Q92785 391 aa13.57□□□□□ -0.24
CDK13-206ENST00000611390 UBA5Q9GZZ9 404 aa13.57□□□□□ -0.24
CDK13-206ENST00000611390 TMEM60Q9H2L4 133 aa13.57□□□□□ -0.24
CDK13-206ENST00000611390 KCNQ5Q9NR82 932 aa13.57□□□□□ -0.24
CDK13-206ENST00000611390 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
CDK13-206ENST00000611390 CFAP100Q494V2 611 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 C7orf43Q8WVR3 580 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 IDI2Q9BXS1 227 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 DHX36Q9H2U1 1008 aaKnown RBP13.56□□□□□ -0.24
CDK13-206ENST00000611390 KCND1Q9NSA2 647 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 SLX4Q8IY92 1834 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 GREB1LQ9C091 1923 aaPredicted RBP13.56□□□□□ -0.24
CDK13-206ENST00000611390 FRMPD2Q68DX3 1309 aaPredicted RBP13.56□□□□□ -0.24
CDK13-206ENST00000611390 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
CDK13-206ENST00000611390 SFPQP23246 707 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDK13-206ENST00000611390 ZNF543Q08ER8 600 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 ORC2Q13416 577 aaPredicted RBP13.56□□□□□ -0.24
CDK13-206ENST00000611390 ARMCX5Q6P1M9 558 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 KIAA0825Q8IV33 1275 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 VSTM4Q8IW00 320 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 MYRIPQ8NFW9 859 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 MED15Q96RN5 788 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
CDK13-206ENST00000611390 ZNF646O15015 1829 aaPredicted RBP13.56□□□□□ -0.24
CDK13-206ENST00000611390 MYH8P13535 1937 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 CASP1P29466 404 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 CHRNA5P30532 468 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 EIF6P56537 245 aaKnown RBP13.55□□□□□ -0.24
CDK13-206ENST00000611390 CUL4BQ13620 913 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 CC2D2BQ6DHV5 1058 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 NEK8Q86SG6 692 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
CDK13-206ENST00000611390 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 DISC1Q9NRI5 854 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 STK32BQ9NY57 414 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 KCNJ6P48051 423 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 GPATCH4Q5T3I0 446 aaKnown RBP13.55□□□□□ -0.24
CDK13-206ENST00000611390 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 REXO1Q8N1G1 1221 aaKnown RBP13.55□□□□□ -0.24
CDK13-206ENST00000611390 MTRQ99707 1265 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 DNAJC18Q9H819 358 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 SERPINA10Q9UK55 444 aa13.55□□□□□ -0.24
CDK13-206ENST00000611390 SYNRGQ9UMZ2 1314 aa13.54□□□□□ -0.24
CDK13-206ENST00000611390 NRDCO43847 1150 aa13.54□□□□□ -0.24
CDK13-206ENST00000611390 OR52Z1P0C646 297 aa13.54□□□□□ -0.24
CDK13-206ENST00000611390 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
CDK13-206ENST00000611390 STAT6P42226 847 aa13.54□□□□□ -0.24
CDK13-206ENST00000611390 SPATA1Q5VX52 437 aa13.54□□□□□ -0.24
CDK13-206ENST00000611390 ZFPM1Q8IX07 1006 aa13.54□□□□□ -0.24
CDK13-206ENST00000611390 SUPT20HQ8NEM7 779 aa13.54□□□□□ -0.24
CDK13-206ENST00000611390 AK8Q96MA6 479 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms