RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 POLR2MP0CAP2 368 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 CDC27P30260 824 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 ZNF569Q5MCW4 686 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 GALNT17Q6IS24 598 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 ZBTB9Q96C00 473 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 IMPG2Q9BZV3 1241 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 GBP3Q9H0R5 595 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 ZNF277Q9NRM2 450 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 FANCLQ9NW38 375 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 CCPG1Q9ULG6 757 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 FRMD4BQ9Y2L6 1034 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 USP42Q9H9J4 1324 aaKnown RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 NOP56O00567 594 aaKnown RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 PRPF3O43395 683 aaKnown RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 ECE2O60344 883 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 GCNT3O95395 438 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 GH2P01242 217 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 PPP1R2P41236 205 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 KRT83P78385 493 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 TICAM2Q86XR7 235 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 RTKN2Q8IZC4 609 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 RDH13Q8NBN7 331 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 EHBP1Q8NDI1 1231 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 RGS22Q8NE09 1264 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 NSUN4Q96CB9 384 aaKnown RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 TMEM47Q9BQJ4 181 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 MRPL44Q9H9J2 332 aaKnown RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 RRAGDQ9NQL2 400 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 PIM2Q9P1W9 311 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 MRPL11Q9Y3B7 192 aaKnown RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 NCOA3Q9Y6Q9 1424 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 A0A0G2JLW4 131 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 EPB41P11171 864 aaKnown RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 BMP3P12645 472 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 SNAP25P60880 206 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 DPH6Q7L8W6 267 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 NT5C3AQ9H0P0 336 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 LY9Q9HBG7 655 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 ZDHHC9Q9Y397 364 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 TACC1O75410 805 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 SMTNP53814 917 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 BIRC3Q13489 604 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 DPCR1Q3MIW9 517 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 NLRX1Q86UT6 975 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 GPBP1Q86WP2 473 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 TBC1D16Q8TBP0 767 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 TAOK3Q9H2K8 898 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 SLC39A2Q9NP94 309 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 PPP6R2O75170 966 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 CBX1P83916 185 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 ALX1Q15699 326 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 PLA2G4DQ86XP0 818 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 SMYD4Q8IYR2 804 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-218ENST00000610726 DCPSQ96C86 337 aaKnown RBP8.12□□□□□ -1.11
CSDE1-218ENST00000610726 CAPZA3Q96KX2 299 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 AS3MTQ9HBK9 375 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.12□□□□□ -1.11
CSDE1-218ENST00000610726 MROH7-TTC4A0A0A0MT08 1334 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 FAM170AA1A519 330 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 CTNNA2P26232 953 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 ADKP55263 362 aaKnown RBP8.12□□□□□ -1.11
CSDE1-218ENST00000610726 LRMPQ12912 555 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 UBE2SQ16763 222 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 LONRF3Q496Y0 759 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 CCDC122Q5T0U0 273 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 TMTC3Q6ZXV5 915 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 FOXP4Q8IVH2 680 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-218ENST00000610726 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 EPSTI1Q96J88 318 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 RPAP1Q9BWH6 1393 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-218ENST00000610726 PCDHB13Q9Y5F0 798 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 GSTTP1A0A1W2PQM5 241 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 EXOC3O60645 756 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 ARHGEF16Q5VV41 709 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 GADL1Q6ZQY3 521 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 MIER3Q7Z3K6 550 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 SP8Q8IXZ3 490 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 ANKRD35Q8N283 1001 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 SYNCQ9H7C4 482 aa8.12□□□□□ -1.11
CSDE1-218ENST00000610726 FAM207AQ9NSI2 230 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-218ENST00000610726 PXDNLA1KZ92 1463 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 CTAGE15A4D2H0 777 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 CTAGE9A4FU28 777 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 USP17L5A8MUK1 530 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 CTAGE8P0CG41 777 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 LONP1P36776 959 aaKnown RBP8.11□□□□□ -1.11
CSDE1-218ENST00000610726 TRAPPC10P48553 1259 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 PTPN21Q16825 1174 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 MAP9Q49MG5 647 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 TBC1D10BQ4KMP7 808 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-218ENST00000610726 CTAGE6Q86UF2 777 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 CTAGE4Q8IX94 777 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 FNBP1Q96RU3 617 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 KIAA1024Q9UPX6 916 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 RFX7Q2KHR2 1363 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 POLR3GO15318 223 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-218ENST00000610726 KLRK1P26718 216 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 SEPT2Q15019 361 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 TSGA10IPQ3SY00 556 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms