RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 PTPREP23469 700 aa13.38□□□□□ -0.27
TP53-220ENST00000610623 TRIM29Q14134 588 aa13.38□□□□□ -0.27
TP53-220ENST00000610623 ZNF662Q6ZS27 426 aa13.38□□□□□ -0.27
TP53-220ENST00000610623 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
TP53-220ENST00000610623 ZBTB1Q9Y2K1 713 aa13.38□□□□□ -0.27
TP53-220ENST00000610623 ZNF831Q5JPB2 1677 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 SLIT2O94813 1529 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 DDX60Q8IY21 1712 aaKnown RBP13.37□□□□□ -0.27
TP53-220ENST00000610623 SYNRGQ9UMZ2 1314 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 ADAMTS2O95450 1211 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 NF2P35240 595 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 WLSQ5T9L3 541 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 FAM89AQ96GI7 184 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 EHD4Q9H223 541 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 VEZTQ9HBM0 779 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 GUCA1BQ9UMX6 200 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 EPN1Q9Y6I3 576 aaPredicted RBP13.37□□□□□ -0.27
TP53-220ENST00000610623 KAT6BQ8WYB5 2073 aa13.37□□□□□ -0.27
TP53-220ENST00000610623 LRRC10BA6NIK2 292 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 MYO1FO00160 1098 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 IFIT1P09914 478 aaKnown RBP13.36□□□□□ -0.27
TP53-220ENST00000610623 CALRP27797 417 aaKnown RBP13.36□□□□□ -0.27
TP53-220ENST00000610623 SMTNP53814 917 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 TIMM10P62072 90 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 CUL4BQ13620 913 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 HLFQ16534 295 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 ALS2CLQ60I27 953 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 RALYLQ86SE5 291 aaKnown RBP13.36□□□□□ -0.27
TP53-220ENST00000610623 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 GGA2Q9UJY4 613 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 SAMM50Q9Y512 469 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 NDUFA10O95299 355 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 MYBL2P10244 700 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 ERCC3P19447 782 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 ANTXR2P58335 489 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 DZIP3Q86Y13 1208 aaKnown RBP13.36□□□□□ -0.27
TP53-220ENST00000610623 TBC1D22AQ8WUA7 517 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 GDAP1L1Q96MZ0 367 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 AIFM3Q96NN9 605 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 NUP88Q99567 741 aaPredicted RBP13.36□□□□□ -0.27
TP53-220ENST00000610623 PUS3Q9BZE2 481 aaKnown RBP13.36□□□□□ -0.27
TP53-220ENST00000610623 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
TP53-220ENST00000610623 MYH8P13535 1937 aa13.36□□□□□ -0.27
TP53-220ENST00000610623 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
TP53-220ENST00000610623 ATP1A1P05023 1023 aaKnown RBP13.35□□□□□ -0.27
TP53-220ENST00000610623 CTSWP56202 376 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 KLC4Q9NSK0 619 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 LRP5O75197 1615 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 LAMB2P55268 1798 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 ANO9A1A5B4 782 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 ANKRD18BA2A2Z9 1011 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 TOM1O60784 492 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 GCFC2P16383 781 aaKnown RBP13.35□□□□□ -0.27
TP53-220ENST00000610623 METAP2P50579 478 aaKnown RBP eCLIP13.35□□□□□ -0.27
TP53-220ENST00000610623 MRPL12P52815 198 aaKnown RBP13.35□□□□□ -0.27
TP53-220ENST00000610623 DRP2Q13474 957 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 SPECC1Q5M775 1068 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 JAKMIP2Q96AA8 810 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 CCDC87Q9NVE4 849 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 HDAC6Q9UBN7 1215 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 LIMA1Q9UHB6 759 aaKnown RBP13.35□□□□□ -0.27
TP53-220ENST00000610623 RIC1Q4ADV7 1423 aa13.35□□□□□ -0.27
TP53-220ENST00000610623 MYH7P12883 1935 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 M0R2C6 588 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 ENC1O14682 589 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 PDE8AO60658 829 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 KRT9P35527 623 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 ITIH3Q06033 890 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 SPAG1Q07617 926 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 EMC10Q5UCC4 262 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 LRCH2Q5VUJ6 765 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 NOSTRINQ8IVI9 506 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 ZNF34Q8IZ26 560 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 MMGT1Q8N4V1 131 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 TTLL11Q8NHH1 800 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 RUFY1Q96T51 708 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 VCPKMTQ9H867 229 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 ODF2LQ9ULJ1 636 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 REXO2Q9Y3B8 237 aaKnown RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 ARAP2Q8WZ64 1704 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 IRS4O14654 1257 aaPredicted RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 KIF3CO14782 793 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 N4BP3O15049 544 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 RASSF9O75901 435 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 SCP2P22307 547 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 KRT83P78385 493 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 ACTN3Q08043 901 aaPredicted RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 CRYMQ14894 314 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 RILPL1Q5EBL4 403 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 RAB11FIP4Q86YS3 637 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 CCDC50Q8IVM0 306 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 CAGE1Q8TC20 777 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 N4BP2L2Q92802 583 aaPredicted RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 GSDMAQ96QA5 445 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 EPN3Q9H201 632 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 CD248Q9HCU0 757 aa13.34□□□□□ -0.27
TP53-220ENST00000610623 BCCIPQ9P287 314 aaKnown RBP eCLIP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms