RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 VAT1LQ9HCJ6 419 aa14.29□□□□□ -0.12
LINC00963-212ENST00000608669 PRDM10Q9NQV6 1147 aa14.29□□□□□ -0.12
LINC00963-212ENST00000608669 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
LINC00963-212ENST00000608669 PRR12Q9ULL5 1215 aa14.29□□□□□ -0.12
LINC00963-212ENST00000608669 RIPK3Q9Y572 518 aa14.29□□□□□ -0.12
LINC00963-212ENST00000608669 TNPO2O14787 897 aaKnown RBP14.28□□□□□ -0.12
LINC00963-212ENST00000608669 DHX16O60231 1041 aaKnown RBP14.28□□□□□ -0.12
LINC00963-212ENST00000608669 GCLCP48506 637 aaPredicted RBP14.28□□□□□ -0.12
LINC00963-212ENST00000608669 EXOSC10Q01780 885 aaKnown RBP14.28□□□□□ -0.12
LINC00963-212ENST00000608669 APOBRQ0VD83 1088 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 SART3Q15020 963 aaKnown RBP14.28□□□□□ -0.12
LINC00963-212ENST00000608669 SYDE2Q5VT97 1194 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 BLOC1S2Q6QNY1 142 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 LBX2Q6XYB7 198 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 NBPF11Q86T75 865 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 NCAPG2Q86XI2 1143 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 POTEDQ86YR6 584 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 ERO1AQ96HE7 468 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 AGBL1Q96MI9 1066 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 TTC14Q96N46 770 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 MCOLN1Q9GZU1 580 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 MORF4L1Q9UBU8 362 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 PTCH2Q9Y6C5 1203 aa14.28□□□□□ -0.12
LINC00963-212ENST00000608669 HTTP42858 3142 aa14.27□□□□□ -0.12
LINC00963-212ENST00000608669 MYPNQ86TC9 1320 aa14.27□□□□□ -0.12
LINC00963-212ENST00000608669 hCG_1642624A0A1W2PR95 340 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 CCDC69A6NI79 296 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 PLEKHA8P1O95397 391 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
LINC00963-212ENST00000608669 SNHG28P0DPA3 235 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 RPS6KB1P23443 525 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 FCGRTP55899 365 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 FGD1P98174 961 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 KIF22Q14807 665 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 SNRNP48Q6IEG0 339 aaKnown RBP14.27□□□□□ -0.13
LINC00963-212ENST00000608669 DHX32Q7L7V1 743 aaKnown RBP14.27□□□□□ -0.13
LINC00963-212ENST00000608669 CTU1Q7Z7A3 348 aaKnown RBP14.27□□□□□ -0.13
LINC00963-212ENST00000608669 ANKS1AQ92625 1134 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 BRF1Q92994 677 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 SPATC1LQ9H0A9 340 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 CWC22Q9HCG8 908 aaKnown RBP14.27□□□□□ -0.13
LINC00963-212ENST00000608669 MAD2L2Q9UI95 211 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 FEM1BQ9UK73 627 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 ZNF214Q9UL59 606 aaPredicted RBP14.27□□□□□ -0.13
LINC00963-212ENST00000608669 RABGAP1Q9Y3P9 1069 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 MYH6P13533 1939 aa14.27□□□□□ -0.13
LINC00963-212ENST00000608669 BAZ2BQ9UIF8 2168 aaKnown RBP14.26□□□□□ -0.13
LINC00963-212ENST00000608669 ZNF536O15090 1300 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 KLF18A0A0U1RQI7 1052 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 ELNP15502 786 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 ERCC3P19447 782 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 KRT32Q14532 448 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 GRM4Q14833 912 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 TSGA10IPQ3SY00 556 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 USH1GQ495M9 461 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 PPP4R3BQ5MIZ7 849 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 GPR142Q7Z601 462 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 CCAR1Q8IX12 1150 aaKnown RBP14.26□□□□□ -0.13
LINC00963-212ENST00000608669 CCDC82Q8N4S0 544 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 PRPF38AQ8NAV1 312 aaKnown RBP14.26□□□□□ -0.13
LINC00963-212ENST00000608669 HOXC10Q9NYD6 342 aa14.26□□□□□ -0.13
LINC00963-212ENST00000608669 CTDP1Q9Y5B0 961 aaPredicted RBP14.26□□□□□ -0.13
LINC00963-212ENST00000608669 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
LINC00963-212ENST00000608669 CYP2B6P20813 491 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 TROAPQ12815 778 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 CCDC178Q5BJE1 867 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 MUM1L1Q5H9M0 696 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 CATIPQ7Z7H3 387 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 ADGRF4Q8IZF3 695 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 SH3TC2Q8TF17 1288 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 TMEM87BQ96K49 555 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 SLC38A10Q9HBR0 1119 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 SYNPO2Q9UMS6 1093 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 ADAMTS5Q9UNA0 930 aa14.25□□□□□ -0.13
LINC00963-212ENST00000608669 LCTP09848 1927 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 GOLGA8BA8MQT2 603 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 ZBED4O75132 1171 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 PGK2P07205 417 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 ALAS1P13196 640 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 STAT3P40763 770 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 FLT3LGP49771 235 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 TRIM32Q13049 653 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 STK3Q13188 491 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 TOB2Q14106 344 aaPredicted RBP14.24□□□□□ -0.13
LINC00963-212ENST00000608669 CDC37Q16543 378 aaPredicted RBP14.24□□□□□ -0.13
LINC00963-212ENST00000608669 CCL14Q16627 93 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 NOM1Q5C9Z4 860 aaKnown RBP14.24□□□□□ -0.13
LINC00963-212ENST00000608669 RUFY3Q7L099 469 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 FAM160B2Q86V87 743 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 CHURC1Q8WUH1 139 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 PURBQ96QR8 312 aaKnown RBP14.24□□□□□ -0.13
LINC00963-212ENST00000608669 SLC12A7Q9Y666 1083 aa14.24□□□□□ -0.13
LINC00963-212ENST00000608669 GOLGA8AA7E2F4 631 aa14.23□□□□□ -0.13
LINC00963-212ENST00000608669 KLRF2D3W0D1 207 aa14.23□□□□□ -0.13
LINC00963-212ENST00000608669 CYTH3O43739 400 aa14.23□□□□□ -0.13
LINC00963-212ENST00000608669 PPP1R11O60927 126 aaPredicted RBP14.23□□□□□ -0.13
LINC00963-212ENST00000608669 ASPRV1Q53RT3 343 aa14.23□□□□□ -0.13
LINC00963-212ENST00000608669 APOA5Q6Q788 366 aa14.23□□□□□ -0.13
LINC00963-212ENST00000608669 PLEKHH3Q7Z736 793 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms