RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 CPXCR1Q8N123 301 aa17■□□□□ 0.31
PKNOX1-210ENST00000607049 ESR2Q92731 530 aa17■□□□□ 0.31
PKNOX1-210ENST00000607049 DDX11Q96FC9 970 aa17■□□□□ 0.31
PKNOX1-210ENST00000607049 FBXO40Q9UH90 709 aa17■□□□□ 0.31
PKNOX1-210ENST00000607049 ZNF214Q9UL59 606 aaPredicted RBP17■□□□□ 0.31
PKNOX1-210ENST00000607049 OGDHLQ9ULD0 1010 aa17■□□□□ 0.31
PKNOX1-210ENST00000607049 ATP2A1O14983 1001 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 EVI5O60447 810 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 TOP1P11387 765 aaKnown RBP16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 MCCP23508 829 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 CCDC178Q5BJE1 867 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 TTC22Q5TAA0 569 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 NPLOC4Q8TAT6 608 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 STAG1Q8WVM7 1258 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 PAWRQ96IZ0 340 aaKnown RBP16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 DSCC1Q9BVC3 393 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 SLC38A10Q9HBR0 1119 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 INCENPQ9NQS7 918 aa16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 DIS3Q9Y2L1 958 aaKnown RBP16.99■□□□□ 0.31
PKNOX1-210ENST00000607049 TNRC18O15417 2968 aaPredicted RBP16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 BRCA2P51587 3418 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 CCND3P30281 292 aaPredicted RBP16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 CYP2C19P33261 490 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 CCDC96Q2M329 555 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 RCSD1Q6JBY9 416 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 IQCA1Q86XH1 822 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 DCAF4Q8WV16 495 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 TTC14Q96N46 770 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 C11orf49Q9H6J7 331 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 IL17RBQ9NRM6 502 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 TCP11L1Q9NUJ3 509 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 FLRT1Q9NZU1 646 aa16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 DDX20Q9UHI6 824 aaKnown RBP16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
PKNOX1-210ENST00000607049 NMT2O60551 498 aa16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 PLA2G6O60733 806 aa16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 COBLO75128 1261 aa16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 ANKRD35Q8N283 1001 aa16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 CHST13Q8NET6 341 aa16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 REPS2Q8NFH8 660 aa16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 MAML3Q96JK9 1138 aa16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 RAVER2Q9HCJ3 691 aaKnown RBP16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 NRBP1Q9UHY1 535 aa16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 MTMR7Q9Y216 660 aa16.97■□□□□ 0.31
PKNOX1-210ENST00000607049 RAD50Q92878 1312 aa16.96■□□□□ 0.31
PKNOX1-210ENST00000607049 A0A0G2JMZ2 1700 aa16.96■□□□□ 0.31
PKNOX1-210ENST00000607049 PDE4AP27815 886 aa16.96■□□□□ 0.31
PKNOX1-210ENST00000607049 MSL3Q8N5Y2 521 aaKnown RBP16.96■□□□□ 0.31
PKNOX1-210ENST00000607049 ARRDC4Q8NCT1 418 aa16.96■□□□□ 0.31
PKNOX1-210ENST00000607049 CNNM2Q9H8M5 875 aa16.96■□□□□ 0.31
PKNOX1-210ENST00000607049 CNPY2Q9Y2B0 182 aa16.96■□□□□ 0.31
PKNOX1-210ENST00000607049 PLXNB2O15031 1838 aa16.96■□□□□ 0.3
PKNOX1-210ENST00000607049 H0YGN5 161 aa16.95■□□□□ 0.3
PKNOX1-210ENST00000607049 PGK2P07205 417 aa16.95■□□□□ 0.3
PKNOX1-210ENST00000607049 TKFCQ3LXA3 575 aa16.95■□□□□ 0.3
PKNOX1-210ENST00000607049 LHX8Q68G74 356 aa16.95■□□□□ 0.3
PKNOX1-210ENST00000607049 KCTD1Q719H9 257 aa16.95■□□□□ 0.3
PKNOX1-210ENST00000607049 CHMP4CQ96CF2 233 aa16.95■□□□□ 0.3
PKNOX1-210ENST00000607049 TMEM47Q9BQJ4 181 aa16.95■□□□□ 0.3
PKNOX1-210ENST00000607049 KRT23Q9C075 422 aa16.95■□□□□ 0.3
PKNOX1-210ENST00000607049 PNMA2Q9UL42 364 aa16.95■□□□□ 0.3
PKNOX1-210ENST00000607049 SEPT4O43236 478 aa16.94■□□□□ 0.3
PKNOX1-210ENST00000607049 CYBAP13498 195 aa16.94■□□□□ 0.3
PKNOX1-210ENST00000607049 NOVP48745 357 aa16.94■□□□□ 0.3
PKNOX1-210ENST00000607049 TRDNQ13061 729 aa16.94■□□□□ 0.3
PKNOX1-210ENST00000607049 TBC1D10CQ8IV04 446 aa16.94■□□□□ 0.3
PKNOX1-210ENST00000607049 DIS3LQ8TF46 1054 aaKnown RBP16.94■□□□□ 0.3
PKNOX1-210ENST00000607049 TINF2Q9BSI4 451 aa16.94■□□□□ 0.3
PKNOX1-210ENST00000607049 ACAD9Q9H845 621 aa16.94■□□□□ 0.3
PKNOX1-210ENST00000607049 RLFQ13129 1914 aa16.94■□□□□ 0.3
PKNOX1-210ENST00000607049 ZNF236Q9UL36 1845 aa16.93■□□□□ 0.3
PKNOX1-210ENST00000607049 GSPT1P15170 499 aaKnown RBP16.93■□□□□ 0.3
PKNOX1-210ENST00000607049 ZNF792Q3KQV3 632 aa16.93■□□□□ 0.3
PKNOX1-210ENST00000607049 DGKHQ86XP1 1220 aa16.93■□□□□ 0.3
PKNOX1-210ENST00000607049 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
PKNOX1-210ENST00000607049 HOMER2Q9NSB8 354 aa16.93■□□□□ 0.3
PKNOX1-210ENST00000607049 MYH4Q9Y623 1939 aa16.93■□□□□ 0.3
PKNOX1-210ENST00000607049 MKI67P46013 3256 aaKnown RBP16.93■□□□□ 0.3
PKNOX1-210ENST00000607049 KBTBD13C9JR72 458 aa16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 KDM4AO75164 1064 aa16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 RARBP10826 455 aa16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 CCDC174Q6PII3 467 aa16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 CENPQQ7L2Z9 268 aaPredicted RBP16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 ZNF467Q7Z7K2 595 aaPredicted RBP16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 KAT14Q9H8E8 782 aa16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 PRR12Q9ULL5 1215 aa16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 RIPK3Q9Y572 518 aa16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 TACC3Q9Y6A5 838 aa16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
PKNOX1-210ENST00000607049 DNM1LO00429 736 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 IGHA2P01877 340 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 MYCNP04198 464 aaPredicted RBP16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 ALAS1P13196 640 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 CHMLP26374 656 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 GPATCH4Q5T3I0 446 aaKnown RBP16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 TRERF1Q96PN7 1200 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 RNF146Q9NTX7 359 aa16.91■□□□□ 0.3
PKNOX1-210ENST00000607049 CCPG1Q9ULG6 757 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms