RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 SERPINC1P01008 464 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 SKILP12757 684 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 HDLBPQ00341 1268 aaKnown RBP22.55■■□□□ 1.2
MMP28-201ENST00000605424 DPYDQ12882 1025 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 KRT25Q7Z3Z0 450 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 C2CD5Q86YS7 1000 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 ZNF622Q969S3 477 aaKnown RBP eCLIP22.55■■□□□ 1.2
MMP28-201ENST00000605424 RIOX1Q9H6W3 641 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 ESYT2A0FGR8 921 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 ADAMTS3O15072 1205 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 HLA-DOAP06340 250 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 GOLGA8HP0CJ92 632 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 E2F4Q16254 413 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 CDC42EP5Q6NZY7 148 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 USP17L2Q6R6M4 530 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 EHD4Q9H223 541 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 DDX4Q9NQI0 724 aaKnown RBP22.55■■□□□ 1.2
MMP28-201ENST00000605424 FANCLQ9NW38 375 aa22.55■■□□□ 1.2
MMP28-201ENST00000605424 SRCAPQ6ZRS2 3230 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 NRDCO43847 1150 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 PDHBP11177 359 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 ATP1A3P13637 1013 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 PRPHP41219 470 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 NAPAP54920 295 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 CCZ1BP86790 482 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 CCZ1P86791 482 aaPredicted RBP22.54■■□□□ 1.2
MMP28-201ENST00000605424 ORC2Q13416 577 aaPredicted RBP22.54■■□□□ 1.2
MMP28-201ENST00000605424 STRIP1Q5VSL9 837 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 APOBEC3HQ6NTF7 200 aaKnown RBP22.54■■□□□ 1.2
MMP28-201ENST00000605424 TMC6Q7Z403 805 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 GRAMD1CQ8IYS0 662 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 ZDHHC15Q96MV8 337 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 MTMR7Q9Y216 660 aa22.54■■□□□ 1.2
MMP28-201ENST00000605424 SNHG28P0DPA3 235 aa22.53■■□□□ 1.2
MMP28-201ENST00000605424 IL17AQ16552 155 aa22.53■■□□□ 1.2
MMP28-201ENST00000605424 SOGA3Q5TF21 947 aa22.53■■□□□ 1.2
MMP28-201ENST00000605424 DTHD1Q6ZMT9 781 aa22.53■■□□□ 1.2
MMP28-201ENST00000605424 UQCRHLA0A096LP55 91 aa22.53■■□□□ 1.2
MMP28-201ENST00000605424 TTLL1O95922 423 aa22.53■■□□□ 1.2
MMP28-201ENST00000605424 UQCRHP07919 91 aa22.53■■□□□ 1.2
MMP28-201ENST00000605424 KCNJ6P48051 423 aa22.53■■□□□ 1.2
MMP28-201ENST00000605424 MYRIPQ8NFW9 859 aa22.53■■□□□ 1.2
MMP28-201ENST00000605424 MYH8P13535 1937 aa22.52■■□□□ 1.2
MMP28-201ENST00000605424 ZNF18P17022 549 aa22.52■■□□□ 1.2
MMP28-201ENST00000605424 AFMP43652 599 aa22.52■■□□□ 1.2
MMP28-201ENST00000605424 CRKP46108 304 aa22.52■■□□□ 1.2
MMP28-201ENST00000605424 ARID5BQ14865 1188 aa22.52■■□□□ 1.2
MMP28-201ENST00000605424 CNKSR1Q969H4 720 aa22.52■■□□□ 1.2
MMP28-201ENST00000605424 CCDC17Q96LX7 622 aa22.52■■□□□ 1.2
MMP28-201ENST00000605424 NFE2L3Q9Y4A8 694 aa22.52■■□□□ 1.2
MMP28-201ENST00000605424 SMCO2A6NFE2 343 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 USP17L5A8MUK1 530 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 DYNC1I1O14576 645 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 AKR1B1P15121 316 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 SFPQP23246 707 aaKnown RBP eCLIP22.51■■□□□ 1.19
MMP28-201ENST00000605424 SCNN1DP51172 638 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 SEMA3FQ13275 785 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 CFAP100Q494V2 611 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 PDXDC2PQ6P474 469 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 RASGRP4Q8TDF6 673 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 DHX36Q9H2U1 1008 aaKnown RBP22.51■■□□□ 1.19
MMP28-201ENST00000605424 GTPBP6O43824 516 aaPredicted RBP22.51■■□□□ 1.19
MMP28-201ENST00000605424 NPM3O75607 178 aaKnown RBP22.51■■□□□ 1.19
MMP28-201ENST00000605424 NONOQ15233 471 aaKnown RBP eCLIP22.51■■□□□ 1.19
MMP28-201ENST00000605424 INF2Q27J81 1249 aa22.51■■□□□ 1.19
MMP28-201ENST00000605424 SHMT1P34896 483 aa22.5■■□□□ 1.19
MMP28-201ENST00000605424 FMR1Q06787 632 aaKnown RBP eCLIP22.5■■□□□ 1.19
MMP28-201ENST00000605424 CC2D2BQ6DHV5 1058 aa22.5■■□□□ 1.19
MMP28-201ENST00000605424 VSTM4Q8IW00 320 aa22.5■■□□□ 1.19
MMP28-201ENST00000605424 AK8Q96MA6 479 aa22.5■■□□□ 1.19
MMP28-201ENST00000605424 MXD3Q9BW11 206 aa22.5■■□□□ 1.19
MMP28-201ENST00000605424 MYL1P05976 194 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 PIGSQ96S52 555 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 CCSER1Q9C0I3 900 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 RMND1Q9NWS8 449 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 ZBTB7AO95365 584 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 CDK11BP21127 795 aaKnown RBP22.49■■□□□ 1.19
MMP28-201ENST00000605424 GTF2F1P35269 517 aaKnown RBP eCLIP22.49■■□□□ 1.19
MMP28-201ENST00000605424 TPD52L1Q16890 204 aaPredicted RBP22.49■■□□□ 1.19
MMP28-201ENST00000605424 SPATA1Q5VX52 437 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 HOMER1Q86YM7 354 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 CCDC112Q8NEF3 446 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 IDI2Q9BXS1 227 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 DBNDD1Q9H9R9 158 aa22.49■■□□□ 1.19
MMP28-201ENST00000605424 CUL4BQ13620 913 aa22.48■■□□□ 1.19
MMP28-201ENST00000605424 DACT2Q5SW24 774 aa22.48■■□□□ 1.19
MMP28-201ENST00000605424 GPATCH4Q5T3I0 446 aaKnown RBP22.48■■□□□ 1.19
MMP28-201ENST00000605424 PPP1R18Q6NYC8 613 aa22.48■■□□□ 1.19
MMP28-201ENST00000605424 ARMCX5Q6P1M9 558 aa22.48■■□□□ 1.19
MMP28-201ENST00000605424 GREB1LQ9C091 1923 aaPredicted RBP22.47■■□□□ 1.19
MMP28-201ENST00000605424 NEK8Q86SG6 692 aa22.47■■□□□ 1.19
MMP28-201ENST00000605424 DPF2Q92785 391 aa22.47■■□□□ 1.19
MMP28-201ENST00000605424 CPVLQ9H3G5 476 aa22.47■■□□□ 1.19
MMP28-201ENST00000605424 DISC1Q9NRI5 854 aa22.47■■□□□ 1.19
MMP28-201ENST00000605424 ECE2O60344 883 aa22.47■■□□□ 1.19
MMP28-201ENST00000605424 ZNF543Q08ER8 600 aa22.47■■□□□ 1.19
MMP28-201ENST00000605424 RASGRP2Q7LDG7 609 aa22.47■■□□□ 1.19
MMP28-201ENST00000605424 CUEDC2Q9H467 287 aa22.47■■□□□ 1.19
MMP28-201ENST00000605424 VAT1LQ9HCJ6 419 aa22.47■■□□□ 1.19
MMP28-201ENST00000605424 SERPINA10Q9UK55 444 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms