RNA–Protein interactions for RNA: ENST00000603546.1

GNAS-256, Transcript of GNAS complex locus, human

TSL 5

Gene GNAS, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-256	ENST00000603546	LRRC47	Q8N1G4	583 aa	Known RBP	32.35	■■■□□ 2.77
GNAS-256	ENST00000603546	KIFC2	Q96AC6	838 aa		32.35	■■■□□ 2.77
GNAS-256	ENST00000603546	RIPK3	Q9Y572	518 aa		32.35	■■■□□ 2.77
GNAS-256	ENST00000603546	CTDP1	Q9Y5B0	961 aa	Predicted RBP	32.35	■■■□□ 2.77
GNAS-256	ENST00000603546	SMCHD1	A6NHR9	2005 aa		32.34	■■■□□ 2.77
GNAS-256	ENST00000603546	FOXP2	O15409	715 aa		32.34	■■■□□ 2.77
GNAS-256	ENST00000603546	SLFN13	Q68D06	897 aa		32.34	■■■□□ 2.77
GNAS-256	ENST00000603546	CPXCR1	Q8N123	301 aa		32.34	■■■□□ 2.77
GNAS-256	ENST00000603546	UBE2O	Q9C0C9	1292 aa	Known RBP	32.34	■■■□□ 2.77
GNAS-256	ENST00000603546	SLC38A10	Q9HBR0	1119 aa		32.34	■■■□□ 2.77
GNAS-256	ENST00000603546	PPP4R3B	Q5MIZ7	849 aa		32.33	■■■□□ 2.77
GNAS-256	ENST00000603546	TICAM2	Q86XR7	235 aa		32.33	■■■□□ 2.77
GNAS-256	ENST00000603546	DDX11	Q96FC9	970 aa		32.33	■■■□□ 2.77
GNAS-256	ENST00000603546	HELLS	Q9NRZ9	838 aa		32.33	■■■□□ 2.77
GNAS-256	ENST00000603546	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	32.33	■■■□□ 2.77
GNAS-256	ENST00000603546	PLXNA1	Q9UIW2	1896 aa		32.33	■■■□□ 2.77
GNAS-256	ENST00000603546	BMP3	P12645	472 aa		32.32	■■■□□ 2.76
GNAS-256	ENST00000603546	LRRC41	Q15345	812 aa		32.32	■■■□□ 2.76
GNAS-256	ENST00000603546	SLC39A5	Q6ZMH5	540 aa		32.32	■■■□□ 2.76
GNAS-256	ENST00000603546	TDH	Q8IZJ6	230 aa		32.32	■■■□□ 2.76
GNAS-256	ENST00000603546	MSL3	Q8N5Y2	521 aa	Known RBP	32.32	■■■□□ 2.76
GNAS-256	ENST00000603546	LRCH3	Q96II8	777 aa		32.32	■■■□□ 2.76
GNAS-256	ENST00000603546	MYCN	P04198	464 aa	Predicted RBP	32.31	■■■□□ 2.76
GNAS-256	ENST00000603546	FDX1	P10109	184 aa		32.31	■■■□□ 2.76
GNAS-256	ENST00000603546	OAZ1	P54368	228 aa		32.31	■■■□□ 2.76
GNAS-256	ENST00000603546	RAVER2	Q9HCJ3	691 aa	Known RBP	32.31	■■■□□ 2.76
GNAS-256	ENST00000603546	ANAPC4	Q9UJX5	808 aa		32.31	■■■□□ 2.76
GNAS-256	ENST00000603546	DNAJC25-GNG10	A0A024R161	153 aa		32.3	■■■□□ 2.76
GNAS-256	ENST00000603546	RARB	P10826	455 aa		32.3	■■■□□ 2.76
GNAS-256	ENST00000603546	SLC4A3	P48751	1232 aa		32.3	■■■□□ 2.76
GNAS-256	ENST00000603546	RTP1	P59025	263 aa		32.3	■■■□□ 2.76
GNAS-256	ENST00000603546	CTDSPL2	Q05D32	466 aa		32.3	■■■□□ 2.76
GNAS-256	ENST00000603546	ALX1	Q15699	326 aa		32.3	■■■□□ 2.76
GNAS-256	ENST00000603546	LRIT3	Q3SXY7	679 aa		32.3	■■■□□ 2.76
GNAS-256	ENST00000603546	DNAH12	Q6ZR08	3092 aa		32.3	■■■□□ 2.76
GNAS-256	ENST00000603546	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	32.3	■■■□□ 2.76	1e-13	■□□□□ 9.5
GNAS-256	ENST00000603546	ZNF865	P0CJ78	1059 aa	Predicted RBP	32.29	■■■□□ 2.76
GNAS-256	ENST00000603546	TAL1	P17542	331 aa	Predicted RBP	32.29	■■■□□ 2.76
GNAS-256	ENST00000603546	MDM2	Q00987	491 aa	Predicted RBP	32.29	■■■□□ 2.76
GNAS-256	ENST00000603546	VPS53	Q5VIR6	699 aa		32.29	■■■□□ 2.76
GNAS-256	ENST00000603546	GMCL1	Q96IK5	515 aa		32.29	■■■□□ 2.76
GNAS-256	ENST00000603546	XPNPEP3	Q9NQH7	507 aa		32.29	■■■□□ 2.76
GNAS-256	ENST00000603546	FBXO40	Q9UH90	709 aa		32.29	■■■□□ 2.76
GNAS-256	ENST00000603546	CNPY2	Q9Y2B0	182 aa		32.29	■■■□□ 2.76
GNAS-256	ENST00000603546	LAMA3	Q16787	3333 aa		32.29	■■■□□ 2.76
GNAS-256	ENST00000603546	TSPY2	A6NKD2	308 aa		32.28	■■■□□ 2.76
GNAS-256	ENST00000603546	ADCYAP1R1	P41586	468 aa		32.28	■■■□□ 2.76
GNAS-256	ENST00000603546	MAMDC4	Q6UXC1	1216 aa		32.28	■■■□□ 2.76
GNAS-256	ENST00000603546	CHST13	Q8NET6	341 aa		32.28	■■■□□ 2.76
GNAS-256	ENST00000603546	CHURC1	Q8WUH1	139 aa		32.28	■■■□□ 2.76
GNAS-256	ENST00000603546	INCENP	Q9NQS7	918 aa		32.28	■■■□□ 2.76
GNAS-256	ENST00000603546	TMEM232	C9JQI7	657 aa		32.27	■■■□□ 2.76
GNAS-256	ENST00000603546	AKR1A1	P14550	325 aa		32.27	■■■□□ 2.76
GNAS-256	ENST00000603546	MCMDC2	Q4G0Z9	681 aa		32.27	■■■□□ 2.76
GNAS-256	ENST00000603546	GPR153	Q6NV75	609 aa		32.27	■■■□□ 2.76
GNAS-256	ENST00000603546	ZNF467	Q7Z7K2	595 aa	Predicted RBP	32.27	■■■□□ 2.76
GNAS-256	ENST00000603546	LBHD1	Q9BQE6	289 aa	Predicted RBP	32.27	■■■□□ 2.76
GNAS-256	ENST00000603546	IL17RB	Q9NRM6	502 aa		32.27	■■■□□ 2.76
GNAS-256	ENST00000603546	PRKAG2	Q9UGJ0	569 aa		32.27	■■■□□ 2.76
GNAS-256	ENST00000603546	ATP11B	Q9Y2G3	1177 aa		32.27	■■■□□ 2.76
GNAS-256	ENST00000603546	SYNGAP1	Q96PV0	1343 aa		32.26	■■■□□ 2.76
GNAS-256	ENST00000603546	SLC1A4	P43007	532 aa		32.26	■■■□□ 2.75
GNAS-256	ENST00000603546	STAT2	P52630	851 aa		32.26	■■■□□ 2.75
GNAS-256	ENST00000603546	SNX17	Q15036	470 aa		32.26	■■■□□ 2.75
GNAS-256	ENST00000603546	RNF180	Q86T96	592 aa		32.26	■■■□□ 2.75
GNAS-256	ENST00000603546	FAM160B2	Q86V87	743 aa		32.26	■■■□□ 2.75
GNAS-256	ENST00000603546	STAG1	Q8WVM7	1258 aa		32.26	■■■□□ 2.75
GNAS-256	ENST00000603546	YTHDC1	Q96MU7	727 aa	Known RBP	32.26	■■■□□ 2.75
GNAS-256	ENST00000603546	RWDD1	Q9H446	243 aa	Predicted RBP	32.26	■■■□□ 2.75
GNAS-256	ENST00000603546	STX8	Q9UNK0	236 aa		32.26	■■■□□ 2.75
GNAS-256	ENST00000603546	PLA2G6	O60733	806 aa		32.25	■■■□□ 2.75
GNAS-256	ENST00000603546	SNAI1	O95863	264 aa	Predicted RBP	32.25	■■■□□ 2.75
GNAS-256	ENST00000603546	FGR	P09769	529 aa		32.25	■■■□□ 2.75
GNAS-256	ENST00000603546	MCC	P23508	829 aa		32.25	■■■□□ 2.75
GNAS-256	ENST00000603546	C1orf53	Q5VUE5	145 aa		32.25	■■■□□ 2.75
GNAS-256	ENST00000603546	ANKRD35	Q8N283	1001 aa		32.25	■■■□□ 2.75
GNAS-256	ENST00000603546	LNPK	Q9C0E8	428 aa		32.25	■■■□□ 2.75
GNAS-256	ENST00000603546	PHF24	Q9UPV7	400 aa		32.25	■■■□□ 2.75
GNAS-256	ENST00000603546	TACC3	Q9Y6A5	838 aa		32.25	■■■□□ 2.75
GNAS-256	ENST00000603546	ORC4	O43929	436 aa		32.24	■■■□□ 2.75
GNAS-256	ENST00000603546	RANBP6	O60518	1105 aa	Known RBP	32.24	■■■□□ 2.75
GNAS-256	ENST00000603546	SMC5	Q8IY18	1101 aa		32.24	■■■□□ 2.75
GNAS-256	ENST00000603546	FERMT2	Q96AC1	680 aa		32.24	■■■□□ 2.75
GNAS-256	ENST00000603546	FAM227B	Q96M60	508 aa		32.24	■■■□□ 2.75
GNAS-256	ENST00000603546	ISY1	Q9ULR0	285 aa	Known RBP	32.24	■■■□□ 2.75
GNAS-256	ENST00000603546	PGK1	P00558	417 aa		32.23	■■■□□ 2.75
GNAS-256	ENST00000603546	FGA	P02671	866 aa		32.23	■■■□□ 2.75
GNAS-256	ENST00000603546	NOV	P48745	357 aa		32.23	■■■□□ 2.75
GNAS-256	ENST00000603546	RCSD1	Q6JBY9	416 aa		32.23	■■■□□ 2.75
GNAS-256	ENST00000603546	FAM184B	Q9ULE4	1060 aa		32.23	■■■□□ 2.75
GNAS-256	ENST00000603546		A0A0D9SFI3	127 aa		32.22	■■■□□ 2.75
GNAS-256	ENST00000603546	NMT2	O60551	498 aa		32.22	■■■□□ 2.75
GNAS-256	ENST00000603546	IK	Q13123	557 aa	Predicted RBP	32.21	■■■□□ 2.75
GNAS-256	ENST00000603546	TRIM60	Q495X7	471 aa		32.21	■■■□□ 2.75
GNAS-256	ENST00000603546	TRIM6-TRIM34	B2RNG4	842 aa		32.2	■■■□□ 2.75
GNAS-256	ENST00000603546	HSPD1	P10809	573 aa	Known RBP	32.2	■■■□□ 2.75
GNAS-256	ENST00000603546	ADAMTS4	O75173	837 aa		32.19	■■■□□ 2.74
GNAS-256	ENST00000603546	NMI	Q13287	307 aa	Predicted RBP	32.19	■■■□□ 2.74
GNAS-256	ENST00000603546	TKFC	Q3LXA3	575 aa		32.19	■■■□□ 2.74
GNAS-256	ENST00000603546	B4GALNT3	Q6L9W6	998 aa		32.19	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms