RNA–Protein interactions for RNA: ENST00000602970.1

UBE2E3-214, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-214ENST00000602970 DCAF4Q8WV16 495 aa13.94□□□□□ -0.18
UBE2E3-214ENST00000602970 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
UBE2E3-214ENST00000602970 ATP6V1DQ9Y5K8 247 aa13.94□□□□□ -0.18
UBE2E3-214ENST00000602970 FRMPD2Q68DX3 1309 aaPredicted RBP13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 CTNND1O60716 968 aaKnown RBP13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 ZNF543Q08ER8 600 aa13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 RESTQ13127 1097 aa13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 EAPPQ56P03 285 aaPredicted RBP13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 GPATCH4Q5T3I0 446 aaKnown RBP13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 SLFN13Q68D06 897 aa13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 KRT26Q7Z3Y9 468 aa13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 USP48Q86UV5 1035 aa13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 FBXO18Q8NFZ0 1043 aa13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 SH2D4AQ9H788 454 aa13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
UBE2E3-214ENST00000602970 hCG_1642624A0A1W2PR95 340 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 A0A1W2PRG0 241 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 POTECB2RU33 542 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 RAD21O60216 631 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 SMARCA1P28370 1054 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 INPP5BP32019 993 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 PKN1Q16512 942 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 SLC35G1Q2M3R5 365 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 KRT40Q6A162 431 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 MCTP1Q6DN14 999 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 OTUD7BQ6GQQ9 843 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 PNMA8AQ86V59 439 aaPredicted RBP13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 KHSRPQ92945 711 aaKnown RBP eCLIP13.92□□□□□ -0.183e-9■■□□□ 14.2
UBE2E3-214ENST00000602970 WRNIP1Q96S55 665 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 GJB4Q9NTQ9 266 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 ZNF112Q9UJU3 913 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 TMX2Q9Y320 296 aa13.92□□□□□ -0.18
UBE2E3-214ENST00000602970 DDX11L8A8MPP1 907 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 F5H6K3 240 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 CYTH3O43739 400 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 NDUFB10O96000 172 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 SCG2P13521 617 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 XBP1P17861 261 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 MCM4P33991 863 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 ECE1P42892 770 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 SLC1A4P43007 532 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 KLRC3Q07444 240 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 FOXD4L6Q3SYB3 417 aaPredicted RBP13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 FOXD4L3Q6VB84 417 aaPredicted RBP13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 SCYL3Q8IZE3 742 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 ACER1Q8TDN7 264 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 PIBF1Q8WXW3 757 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 GMCL1Q96IK5 515 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 CPVLQ9H3G5 476 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 ZSCAN16Q9H4T2 348 aaPredicted RBP13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 GOPCQ9HD26 462 aa13.91□□□□□ -0.18
UBE2E3-214ENST00000602970 GOLGA6L22H0YM25 854 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 PPP1R37O75864 691 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 KCTD1Q719H9 257 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 CCDC84Q86UT8 332 aaPredicted RBP13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 KLRG1Q96E93 195 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 RRP36Q96EU6 259 aaKnown RBP13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 CHAMP1Q96JM3 812 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 FEZ1Q99689 392 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 UBA5Q9GZZ9 404 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 VPS54Q9P1Q0 977 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 PTPRFP10586 1907 aa13.9□□□□□ -0.18
UBE2E3-214ENST00000602970 SRCAPQ6ZRS2 3230 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 MMP1P03956 469 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 BMP3P12645 472 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 NF2P35240 595 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 KIF23Q02241 960 aaPredicted RBP13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 SAFBQ15424 915 aaKnown RBP eCLIP13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 NOL9Q5SY16 702 aaKnown RBP13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 GLIS2Q9BZE0 524 aaPredicted RBP13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 RIOX1Q9H6W3 641 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 VCPKMTQ9H867 229 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 PICK1Q9NRD5 415 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 SEC63Q9UGP8 760 aaKnown RBP13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 KCNJ14Q9UNX9 436 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 FZD1Q9UP38 647 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
UBE2E3-214ENST00000602970 GNL2Q13823 731 aaKnown RBP13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 PRKG1Q13976 671 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 ZYXQ15942 572 aaKnown RBP13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 TTBK2Q6IQ55 1244 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 DLK2Q6UY11 383 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 BRAPQ7Z569 592 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 ZNF687Q8N1G0 1237 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 TMC2Q8TDI7 906 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 GPKOWQ92917 476 aaPredicted RBP eCLIP13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 ZKSCAN4Q969J2 545 aaPredicted RBP13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 SHISA4Q96DD7 197 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 PIGSQ96S52 555 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 NUP88Q99567 741 aaPredicted RBP13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 SH3GLB2Q9NR46 395 aa13.88□□□□□ -0.19
UBE2E3-214ENST00000602970 KIF28PB7ZC32 967 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms