RNA–Protein interactions for RNA: ENST00000602479.5

UBE2E3-206, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-206ENST00000602479 COL6A3P12111 3177 aa25.84■■□□□ 1.73
UBE2E3-206ENST00000602479 SOX1O00570 391 aaPredicted RBP25.83■■□□□ 1.73
UBE2E3-206ENST00000602479 ATP2A1O14983 1001 aa25.83■■□□□ 1.73
UBE2E3-206ENST00000602479 TFAP4Q01664 338 aa25.83■■□□□ 1.73
UBE2E3-206ENST00000602479 GJC2Q5T442 439 aaPredicted RBP25.83■■□□□ 1.73
UBE2E3-206ENST00000602479 TINF2Q9BSI4 451 aa25.83■■□□□ 1.73
UBE2E3-206ENST00000602479 VPS53Q5VIR6 699 aa25.82■■□□□ 1.72
UBE2E3-206ENST00000602479 ARRDC4Q8NCT1 418 aa25.82■■□□□ 1.72
UBE2E3-206ENST00000602479 NRBP1Q9UHY1 535 aa25.82■■□□□ 1.72
UBE2E3-206ENST00000602479 FEM1BQ9UK73 627 aa25.82■■□□□ 1.72
UBE2E3-206ENST00000602479 RIPK3Q9Y572 518 aa25.82■■□□□ 1.72
UBE2E3-206ENST00000602479 LCTP09848 1927 aa25.82■■□□□ 1.72
UBE2E3-206ENST00000602479 LRRC37A2A6NM11 1700 aa25.82■■□□□ 1.72
UBE2E3-206ENST00000602479 KIFC2Q96AC6 838 aa25.81■■□□□ 1.72
UBE2E3-206ENST00000602479 SLC38A10Q9HBR0 1119 aa25.81■■□□□ 1.72
UBE2E3-206ENST00000602479 KBTBD13C9JR72 458 aa25.8■■□□□ 1.72
UBE2E3-206ENST00000602479 ATN1P54259 1190 aaPredicted RBP25.8■■□□□ 1.72
UBE2E3-206ENST00000602479 CTDSPL2Q05D32 466 aa25.8■■□□□ 1.72
UBE2E3-206ENST00000602479 AAMPQ13685 434 aa25.8■■□□□ 1.72
UBE2E3-206ENST00000602479 HELLSQ9NRZ9 838 aa25.8■■□□□ 1.72
UBE2E3-206ENST00000602479 TACC3Q9Y6A5 838 aa25.8■■□□□ 1.72
UBE2E3-206ENST00000602479 DNAJC25-GNG10A0A024R161 153 aa25.79■■□□□ 1.72
UBE2E3-206ENST00000602479 ZBED4O75132 1171 aa25.79■■□□□ 1.72
UBE2E3-206ENST00000602479 BMP3P12645 472 aa25.79■■□□□ 1.72
UBE2E3-206ENST00000602479 SLFN13Q68D06 897 aa25.79■■□□□ 1.72
UBE2E3-206ENST00000602479 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.79■■□□□ 1.72
UBE2E3-206ENST00000602479 CPXCR1Q8N123 301 aa25.79■■□□□ 1.72
UBE2E3-206ENST00000602479 LRCH3Q96II8 777 aa25.79■■□□□ 1.72
UBE2E3-206ENST00000602479 ANAPC4Q9UJX5 808 aa25.79■■□□□ 1.72
UBE2E3-206ENST00000602479 A0A0D9SFI3 127 aa25.78■■□□□ 1.72
UBE2E3-206ENST00000602479 TAL1P17542 331 aaPredicted RBP25.78■■□□□ 1.72
UBE2E3-206ENST00000602479 LRRC41Q15345 812 aa25.78■■□□□ 1.72
UBE2E3-206ENST00000602479 GMCL1Q96IK5 515 aa25.78■■□□□ 1.72
UBE2E3-206ENST00000602479 FAM227BQ96M60 508 aa25.78■■□□□ 1.72
UBE2E3-206ENST00000602479 LNPKQ9C0E8 428 aa25.78■■□□□ 1.72
UBE2E3-206ENST00000602479 RAVER2Q9HCJ3 691 aaKnown RBP25.78■■□□□ 1.72
UBE2E3-206ENST00000602479 INCENPQ9NQS7 918 aa25.78■■□□□ 1.72
UBE2E3-206ENST00000602479 OAZ1P54368 228 aa25.77■■□□□ 1.72
UBE2E3-206ENST00000602479 RTP1P59025 263 aa25.77■■□□□ 1.72
UBE2E3-206ENST00000602479 TICAM2Q86XR7 235 aa25.77■■□□□ 1.72
UBE2E3-206ENST00000602479 SMC5Q8IY18 1101 aa25.77■■□□□ 1.72
UBE2E3-206ENST00000602479 TDHQ8IZJ6 230 aa25.77■■□□□ 1.72
UBE2E3-206ENST00000602479 IL17RBQ9NRM6 502 aa25.77■■□□□ 1.72
UBE2E3-206ENST00000602479 CTDP1Q9Y5B0 961 aaPredicted RBP25.77■■□□□ 1.72
UBE2E3-206ENST00000602479 TSPY2A6NKD2 308 aa25.76■■□□□ 1.71
UBE2E3-206ENST00000602479 NMT2O60551 498 aa25.76■■□□□ 1.71
UBE2E3-206ENST00000602479 ZNF865P0CJ78 1059 aaPredicted RBP25.76■■□□□ 1.71
UBE2E3-206ENST00000602479 ALX1Q15699 326 aa25.76■■□□□ 1.71
UBE2E3-206ENST00000602479 MSL3Q8N5Y2 521 aaKnown RBP25.76■■□□□ 1.71
UBE2E3-206ENST00000602479 DDX11Q96FC9 970 aa25.76■■□□□ 1.71
UBE2E3-206ENST00000602479 UBE2OQ9C0C9 1292 aaKnown RBP25.76■■□□□ 1.71
UBE2E3-206ENST00000602479 XPNPEP3Q9NQH7 507 aa25.76■■□□□ 1.71
UBE2E3-206ENST00000602479 SYNGAP1Q96PV0 1343 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 TMEM232C9JQI7 657 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 ORC4O43929 436 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 MYCNP04198 464 aaPredicted RBP25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 RARBP10826 455 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 SLC4A3P48751 1232 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 STAT2P52630 851 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 MDM2Q00987 491 aaPredicted RBP25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 SNX17Q15036 470 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 PPP4R3BQ5MIZ7 849 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 SLC39A5Q6ZMH5 540 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 STX8Q9UNK0 236 aa25.75■■□□□ 1.71
UBE2E3-206ENST00000602479 ZMYM6O95789 1325 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 FGRP09769 529 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 AKR1A1P14550 325 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 ADCYAP1R1P41586 468 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 MCMDC2Q4G0Z9 681 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 MAMDC4Q6UXC1 1216 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 RASGRP2Q7LDG7 609 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 FBXO40Q9UH90 709 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 CNPY2Q9Y2B0 182 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 ATP11BQ9Y2G3 1177 aa25.74■■□□□ 1.71
UBE2E3-206ENST00000602479 RANBP6O60518 1105 aaKnown RBP25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 FDX1P10109 184 aa25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 MCCP23508 829 aa25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 SLC1A4P43007 532 aa25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 NOVP48745 357 aa25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 NMIQ13287 307 aaPredicted RBP25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 LRIT3Q3SXY7 679 aa25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 ZNF467Q7Z7K2 595 aaPredicted RBP25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 ZNF589Q86UQ0 364 aaPredicted RBP25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 FAM160B2Q86V87 743 aa25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 CHST13Q8NET6 341 aa25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 LENG1Q96BZ8 264 aaPredicted RBP25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 FGD4Q96M96 766 aa25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 RWDD1Q9H446 243 aaPredicted RBP25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 ISY1Q9ULR0 285 aaKnown RBP25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 PHF24Q9UPV7 400 aa25.73■■□□□ 1.71
UBE2E3-206ENST00000602479 ZNF536O15090 1300 aa25.72■■□□□ 1.71
UBE2E3-206ENST00000602479 SNAI1O95863 264 aaPredicted RBP25.72■■□□□ 1.71
UBE2E3-206ENST00000602479 PGK1P00558 417 aa25.72■■□□□ 1.71
UBE2E3-206ENST00000602479 FGAP02671 866 aa25.72■■□□□ 1.71
UBE2E3-206ENST00000602479 ANKRD35Q8N283 1001 aa25.72■■□□□ 1.71
UBE2E3-206ENST00000602479 CHURC1Q8WUH1 139 aa25.72■■□□□ 1.71
UBE2E3-206ENST00000602479 STAG1Q8WVM7 1258 aa25.72■■□□□ 1.71
UBE2E3-206ENST00000602479 FERMT2Q96AC1 680 aa25.72■■□□□ 1.71
UBE2E3-206ENST00000602479 CHMP4CQ96CF2 233 aa25.72■■□□□ 1.71
UBE2E3-206ENST00000602479 CCDC171Q6TFL3 1326 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms