RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 USP17L21D6R901 530 aa22.05■■□□□ 1.12
IRF3-231ENST00000602190 MBD4O95243 580 aa22.05■■□□□ 1.12
IRF3-231ENST00000602190 SLFNL1Q499Z3 407 aa22.05■■□□□ 1.12
IRF3-231ENST00000602190 TJAP1Q5JTD0 557 aa22.05■■□□□ 1.12
IRF3-231ENST00000602190 MFSD5Q6N075 450 aa22.05■■□□□ 1.12
IRF3-231ENST00000602190 CLASRPQ8N2M8 674 aaKnown RBP22.05■■□□□ 1.12
IRF3-231ENST00000602190 NUP133Q8WUM0 1156 aa22.05■■□□□ 1.12
IRF3-231ENST00000602190 FGD4Q96M96 766 aa22.05■■□□□ 1.12
IRF3-231ENST00000602190 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.05■■□□□ 1.121e-10■□□□□ 10.2
IRF3-231ENST00000602190 UPF3AQ9H1J1 476 aaKnown RBP22.05■■□□□ 1.12
IRF3-231ENST00000602190 CHD7Q9P2D1 2997 aa22.05■■□□□ 1.12
IRF3-231ENST00000602190 MYO9BQ13459 2157 aa22.04■■□□□ 1.12
IRF3-231ENST00000602190 DUSP11O75319 330 aaKnown RBP22.04■■□□□ 1.12
IRF3-231ENST00000602190 UBE3CQ15386 1083 aa22.04■■□□□ 1.12
IRF3-231ENST00000602190 TEX13BQ9BXU2 312 aa22.04■■□□□ 1.12
IRF3-231ENST00000602190 ZNF576Q9H609 170 aa22.04■■□□□ 1.12
IRF3-231ENST00000602190 STARD7Q9NQZ5 370 aa22.04■■□□□ 1.12
IRF3-231ENST00000602190 PAG1Q9NWQ8 432 aa22.04■■□□□ 1.12
IRF3-231ENST00000602190 CNPY2Q9Y2B0 182 aa22.04■■□□□ 1.12
IRF3-231ENST00000602190 MYH4Q9Y623 1939 aa22.04■■□□□ 1.12
IRF3-231ENST00000602190 GBF1Q92538 1859 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 DCDC2CA8MYV0 355 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 ADCY6O43306 1168 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 ATP5JP18859 108 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 TMEM240Q5SV17 173 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 FAM83BQ5T0W9 1011 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 SIRT2Q8IXJ6 389 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 DNAJC2Q99543 621 aaKnown RBP22.03■■□□□ 1.12
IRF3-231ENST00000602190 GOPCQ9HD26 462 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 FAM184BQ9ULE4 1060 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 RIPK3Q9Y572 518 aa22.03■■□□□ 1.12
IRF3-231ENST00000602190 MYADML2A6NDP7 307 aa22.02■■□□□ 1.12
IRF3-231ENST00000602190 CTAGE5O15320 804 aa22.02■■□□□ 1.12
IRF3-231ENST00000602190 CHGBP05060 677 aa22.02■■□□□ 1.12
IRF3-231ENST00000602190 KCNA10Q16322 511 aa22.02■■□□□ 1.12
IRF3-231ENST00000602190 CTR9Q6PD62 1173 aa22.02■■□□□ 1.12
IRF3-231ENST00000602190 HAUS7Q99871 368 aa22.02■■□□□ 1.12
IRF3-231ENST00000602190 LRRC37A2A6NM11 1700 aa22.02■■□□□ 1.12
IRF3-231ENST00000602190 MROH7Q68CQ1 1323 aa22.02■■□□□ 1.12
IRF3-231ENST00000602190 AKNAD1Q5T1N1 836 aa22.01■■□□□ 1.11
IRF3-231ENST00000602190 TIFAQ96CG3 184 aa22.01■■□□□ 1.11
IRF3-231ENST00000602190 SLF1Q9BQI6 1058 aa22.01■■□□□ 1.11
IRF3-231ENST00000602190 KATNBL1Q9H079 304 aa22.01■■□□□ 1.11
IRF3-231ENST00000602190 NYAP2Q9P242 653 aa22.01■■□□□ 1.11
IRF3-231ENST00000602190 GJA9P57773 515 aa22■■□□□ 1.11
IRF3-231ENST00000602190 PPIGQ13427 754 aaKnown RBP eCLIP22■■□□□ 1.113e-13■□□□□ 9
IRF3-231ENST00000602190 SBK1Q52WX2 424 aa22■■□□□ 1.11
IRF3-231ENST00000602190 FAM126BQ8IXS8 530 aa22■■□□□ 1.11
IRF3-231ENST00000602190 RPAP2Q8IXW5 612 aaPredicted RBP22■■□□□ 1.11
IRF3-231ENST00000602190 PBX4Q9BYU1 374 aa22■■□□□ 1.11
IRF3-231ENST00000602190 IGKV6D-41A0A0C4DH26 115 aa21.99■■□□□ 1.11
IRF3-231ENST00000602190 TNFRSF10AO00220 468 aa21.99■■□□□ 1.11
IRF3-231ENST00000602190 RASA1P20936 1047 aa21.99■■□□□ 1.11
IRF3-231ENST00000602190 IRX5P78411 483 aaPredicted RBP21.99■■□□□ 1.11
IRF3-231ENST00000602190 SNRNP48Q6IEG0 339 aaKnown RBP21.99■■□□□ 1.11
IRF3-231ENST00000602190 BDP1A6H8Y1 2624 aa21.99■■□□□ 1.11
IRF3-231ENST00000602190 RAB11FIP3O75154 756 aa21.98■■□□□ 1.11
IRF3-231ENST00000602190 CD4P01730 458 aa21.98■■□□□ 1.11
IRF3-231ENST00000602190 IFIT2P09913 472 aaKnown RBP21.98■■□□□ 1.11
IRF3-231ENST00000602190 ACVR2BQ13705 512 aa21.98■■□□□ 1.11
IRF3-231ENST00000602190 PRPF38AQ8NAV1 312 aaKnown RBP21.98■■□□□ 1.11
IRF3-231ENST00000602190 SLC43A3Q8NBI5 491 aa21.98■■□□□ 1.11
IRF3-231ENST00000602190 PCSK9Q8NBP7 692 aaKnown RBP21.98■■□□□ 1.11
IRF3-231ENST00000602190 PANK1Q8TE04 598 aa21.98■■□□□ 1.11
IRF3-231ENST00000602190 ATXN2LQ8WWM7 1075 aaKnown RBP21.98■■□□□ 1.11
IRF3-231ENST00000602190 GLT1D1Q96MS3 346 aa21.98■■□□□ 1.11
IRF3-231ENST00000602190 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.98■■□□□ 1.113e-6■■■■□ 25.3
IRF3-231ENST00000602190 PUS7LQ9H0K6 701 aaKnown RBP21.98■■□□□ 1.11
IRF3-231ENST00000602190 ABHD16BQ9H3Z7 469 aa21.98■■□□□ 1.11
IRF3-231ENST00000602190 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.98■■□□□ 1.11
IRF3-231ENST00000602190 ARPP21Q9UBL0 812 aaPredicted RBP21.98■■□□□ 1.11
IRF3-231ENST00000602190 SYNPO2Q9UMS6 1093 aa21.98■■□□□ 1.11
IRF3-231ENST00000602190 ARVCFO00192 962 aa21.97■■□□□ 1.11
IRF3-231ENST00000602190 NDUFB10O96000 172 aa21.97■■□□□ 1.11
IRF3-231ENST00000602190 ASGR1P07306 291 aa21.97■■□□□ 1.11
IRF3-231ENST00000602190 PBX2P40425 430 aa21.97■■□□□ 1.11
IRF3-231ENST00000602190 SAMD1Q6SPF0 538 aaPredicted RBP21.97■■□□□ 1.11
IRF3-231ENST00000602190 AMOTL1Q8IY63 956 aa21.97■■□□□ 1.11
IRF3-231ENST00000602190 NUP88Q99567 741 aaPredicted RBP21.97■■□□□ 1.11
IRF3-231ENST00000602190 BOLA2Q9H3K6 86 aa21.97■■□□□ 1.11
IRF3-231ENST00000602190 SLC38A10Q9HBR0 1119 aa21.97■■□□□ 1.11
IRF3-231ENST00000602190 REV3LO60673 3130 aa21.97■■□□□ 1.11
IRF3-231ENST00000602190 A0A0U1RQG5 324 aaPredicted RBP21.96■■□□□ 1.11
IRF3-231ENST00000602190 F5H6K3 240 aa21.96■■□□□ 1.11
IRF3-231ENST00000602190 CSF2RAP15509 400 aa21.96■■□□□ 1.11
IRF3-231ENST00000602190 KLRC3Q07444 240 aa21.96■■□□□ 1.11
IRF3-231ENST00000602190 GIMAP6Q6P9H5 292 aa21.96■■□□□ 1.11
IRF3-231ENST00000602190 MKL1Q969V6 931 aa21.96■■□□□ 1.11
IRF3-231ENST00000602190 ZBTB40Q9NUA8 1239 aa21.96■■□□□ 1.11
IRF3-231ENST00000602190 SLC4A4Q9Y6R1 1079 aa21.96■■□□□ 1.11
IRF3-231ENST00000602190 TRANK1O15050 2925 aa21.95■■□□□ 1.1
IRF3-231ENST00000602190 GRXCR1A8MXD5 290 aa21.95■■□□□ 1.1
IRF3-231ENST00000602190 OAZ1P54368 228 aa21.95■■□□□ 1.1
IRF3-231ENST00000602190 ADGRE1Q14246 886 aa21.95■■□□□ 1.1
IRF3-231ENST00000602190 CCDC144BQ3MJ40 725 aa21.95■■□□□ 1.1
IRF3-231ENST00000602190 PSRC1Q6PGN9 363 aaPredicted RBP21.95■■□□□ 1.1
IRF3-231ENST00000602190 CCDC174Q6PII3 467 aa21.95■■□□□ 1.1
IRF3-231ENST00000602190 HERVK_113Q902F9 699 aa21.95■■□□□ 1.1
IRF3-231ENST00000602190 DDX11Q96FC9 970 aa21.95■■□□□ 1.1
IRF3-231ENST00000602190 STRBPQ96SI9 672 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms