RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 LHX8Q68G74 356 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 CCDC129Q6ZRS4 1044 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 PROCA1Q8NCQ7 364 aaPredicted RBP10.12□□□□□ -0.79
DDX49-211ENST00000601772 DYNLL2Q96FJ2 89 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 STRBPQ96SI9 672 aaKnown RBP10.12□□□□□ -0.79
DDX49-211ENST00000601772 AGTPBP1Q9UPW5 1226 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 SLC45A1Q9Y2W3 748 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 REV3LO60673 3130 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 MYO9BQ13459 2157 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 PLXNB2O15031 1838 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 COL11A1P12107 1806 aaPredicted RBP10.12□□□□□ -0.79
DDX49-211ENST00000601772 LAMA4Q16363 1823 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 FRMPD3Q5JV73 1810 aa10.12□□□□□ -0.79
DDX49-211ENST00000601772 RLFQ13129 1914 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 GSG1L2A8MUP6 293 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 USP17L10C9JJH3 530 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 USP17L12C9JPN9 530 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 USP17L21D6R901 530 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 SDSP20132 328 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 BACE1P56817 501 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 MTMR2Q13614 643 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 ZMYM1Q5SVZ6 1142 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 C12orf60Q5U649 245 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 CTR9Q6PD62 1173 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 SH3RF1Q7Z6J0 888 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 MTERF4Q7Z6M4 381 aaKnown RBP10.11□□□□□ -0.79
DDX49-211ENST00000601772 AMOTL1Q8IY63 956 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 SLC44A5Q8NCS7 719 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 EVI5LQ96CN4 794 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
DDX49-211ENST00000601772 CABP5Q9NP86 173 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 PDLIM7Q9NR12 457 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 LMBRD1Q9NUN5 540 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 SWAP70Q9UH65 585 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 GJD2Q9UKL4 321 aa10.11□□□□□ -0.79
DDX49-211ENST00000601772 C19orf81C9J6K1 198 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 MPHOSPH10O00566 681 aaKnown RBP10.1□□□□□ -0.79
DDX49-211ENST00000601772 OFD1O75665 1012 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 GUCY1A2P33402 732 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 EPHB4P54760 987 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 CUL4AQ13619 759 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 TRIM60Q495X7 471 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 GAS2L3Q86XJ1 694 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 PDLIM2Q96JY6 352 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 EPB41L4AQ9HCS5 686 aaPredicted RBP10.1□□□□□ -0.79
DDX49-211ENST00000601772 TMOD4Q9NZQ9 345 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
DDX49-211ENST00000601772 PNMA3Q9UL41 463 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 WDFY4Q6ZS81 3184 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 A0A0G2JMZ2 1700 aa10.1□□□□□ -0.79
DDX49-211ENST00000601772 TRIM43BA6NCK2 446 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 ZNF500O60304 480 aaPredicted RBP10.09□□□□□ -0.79
DDX49-211ENST00000601772 LETM1O95202 739 aaPredicted RBP10.09□□□□□ -0.79
DDX49-211ENST00000601772 MYCNP04198 464 aaPredicted RBP10.09□□□□□ -0.79
DDX49-211ENST00000601772 GNAT2P19087 354 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 PBX2P40425 430 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 CDK8P49336 464 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 PABPC4Q13310 644 aaKnown RBP eCLIP10.09□□□□□ -0.79
DDX49-211ENST00000601772 HSP90AA2PQ14568 343 aaPredicted RBP10.09□□□□□ -0.79
DDX49-211ENST00000601772 SEPT2Q15019 361 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 ZYXQ15942 572 aaKnown RBP10.09□□□□□ -0.79
DDX49-211ENST00000601772 SBK1Q52WX2 424 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 GIMAP6Q6P9H5 292 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 C16orf86Q6ZW13 317 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 FAM184AQ8NB25 1140 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 TRIM43Q96BQ3 446 aaPredicted RBP10.09□□□□□ -0.79
DDX49-211ENST00000601772 FBXL18Q96ME1 805 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 EMILIN3Q9NT22 766 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 NOL7Q9UMY1 257 aaKnown RBP10.09□□□□□ -0.79
DDX49-211ENST00000601772 ROBO3Q96MS0 1386 aa10.09□□□□□ -0.79
DDX49-211ENST00000601772 LRRC37A2A6NM11 1700 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 MINDY4BA8MYZ0 360 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 PRR33A8MZF0 331 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 CD2BP2O95400 341 aaKnown RBP10.08□□□□□ -0.8
DDX49-211ENST00000601772 APPP05067 770 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 AKR1B1P15121 316 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 NCLP19338 710 aaKnown RBP10.08□□□□□ -0.8
DDX49-211ENST00000601772 CNGA1P29973 690 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 TDO2P48775 406 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 FOXK2Q01167 660 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 CCL14Q16627 93 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 UVSSAQ2YD98 709 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 ZSCAN23Q3MJ62 389 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 MCTP1Q6DN14 999 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 USP17L2Q6R6M4 530 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 LRSAM1Q6UWE0 723 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 IFNL3Q8IZI9 196 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 STK11IPQ8N1F8 1099 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 ACER1Q8TDN7 264 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 FEZ1Q99689 392 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 PBX4Q9BYU1 374 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 ASCC2Q9H1I8 757 aaPredicted RBP10.08□□□□□ -0.8
DDX49-211ENST00000601772 PLXNA1Q9UIW2 1896 aa10.08□□□□□ -0.8
DDX49-211ENST00000601772 GRXCR1A8MXD5 290 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 PATL2C9JE40 543 aaKnown RBP10.07□□□□□ -0.8
DDX49-211ENST00000601772 DNM1LO00429 736 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 HOXA7P31268 230 aaPredicted RBP10.07□□□□□ -0.8
DDX49-211ENST00000601772 USP14P54578 494 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms