RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 MYCNP04198 464 aaPredicted RBP20.22■□□□□ 0.83
SCAF1-204ENST00000601038 TSPY3P0CV98 308 aa20.22■□□□□ 0.83
SCAF1-204ENST00000601038 TSPY8P0CW00 308 aa20.22■□□□□ 0.83
SCAF1-204ENST00000601038 RARBP10826 455 aa20.22■□□□□ 0.83
SCAF1-204ENST00000601038 MSL3Q8N5Y2 521 aaKnown RBP20.22■□□□□ 0.83
SCAF1-204ENST00000601038 PRKAG2Q9UGJ0 569 aa20.22■□□□□ 0.83
SCAF1-204ENST00000601038 RIPK3Q9Y572 518 aa20.22■□□□□ 0.83
SCAF1-204ENST00000601038 CTDP1Q9Y5B0 961 aaPredicted RBP20.22■□□□□ 0.83
SCAF1-204ENST00000601038 MYH4Q9Y623 1939 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 ADCYAP1R1P41586 468 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 TFAP4Q01664 338 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 SNX17Q15036 470 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 ANKRD45Q5TZF3 282 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 CPXCR1Q8N123 301 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 KIFC2Q96AC6 838 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 DDX11Q96FC9 970 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 SLC38A10Q9HBR0 1119 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 XPNPEP3Q9NQH7 507 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 ATP11BQ9Y2G3 1177 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 PLXNA1Q9UIW2 1896 aa20.21■□□□□ 0.83
SCAF1-204ENST00000601038 DNAJC25-GNG10A0A024R161 153 aa20.2■□□□□ 0.82
SCAF1-204ENST00000601038 ZNF865P0CJ78 1059 aaPredicted RBP20.2■□□□□ 0.82
SCAF1-204ENST00000601038 TAL1P17542 331 aaPredicted RBP20.2■□□□□ 0.82
SCAF1-204ENST00000601038 C1orf53Q5VUE5 145 aa20.2■□□□□ 0.82
SCAF1-204ENST00000601038 SLFN13Q68D06 897 aa20.2■□□□□ 0.82
SCAF1-204ENST00000601038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCAF1-204ENST00000601038 LRRC47Q8N1G4 583 aaKnown RBP20.2■□□□□ 0.82
SCAF1-204ENST00000601038 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
SCAF1-204ENST00000601038 FDX1P10109 184 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 BMP3P12645 472 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 AKR1A1P14550 325 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 OAZ1P54368 228 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 PPP4R3BQ5MIZ7 849 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 MAMDC4Q6UXC1 1216 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 RNF180Q86T96 592 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 FERMT2Q96AC1 680 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 CRBNQ96SW2 442 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 RAVER2Q9HCJ3 691 aaKnown RBP20.19■□□□□ 0.82
SCAF1-204ENST00000601038 PHF24Q9UPV7 400 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 SYNGAP1Q96PV0 1343 aa20.19■□□□□ 0.82
SCAF1-204ENST00000601038 FOXP2O15409 715 aa20.18■□□□□ 0.82
SCAF1-204ENST00000601038 PGK1P00558 417 aa20.18■□□□□ 0.82
SCAF1-204ENST00000601038 SLC4A3P48751 1232 aa20.18■□□□□ 0.82
SCAF1-204ENST00000601038 HDAC1Q13547 482 aaPredicted RBP20.18■□□□□ 0.82
SCAF1-204ENST00000601038 TRIM60Q495X7 471 aa20.18■□□□□ 0.82
SCAF1-204ENST00000601038 CCDC129Q6ZRS4 1044 aa20.18■□□□□ 0.82
SCAF1-204ENST00000601038 ZNF467Q7Z7K2 595 aaPredicted RBP20.18■□□□□ 0.82
SCAF1-204ENST00000601038 DEFB123Q8N688 67 aa20.18■□□□□ 0.82
SCAF1-204ENST00000601038 CHST13Q8NET6 341 aa20.18■□□□□ 0.82
SCAF1-204ENST00000601038 FBXO40Q9UH90 709 aa20.18■□□□□ 0.82
SCAF1-204ENST00000601038 LAMA3Q16787 3333 aa20.18■□□□□ 0.82
SCAF1-204ENST00000601038 SNAI1O95863 264 aaPredicted RBP20.17■□□□□ 0.82
SCAF1-204ENST00000601038 GMCL1Q96IK5 515 aa20.17■□□□□ 0.82
SCAF1-204ENST00000601038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.17■□□□□ 0.82
SCAF1-204ENST00000601038 TMEM232C9JQI7 657 aa20.16■□□□□ 0.82
SCAF1-204ENST00000601038 STAT2P52630 851 aa20.16■□□□□ 0.82
SCAF1-204ENST00000601038 PDE1AP54750 535 aa20.16■□□□□ 0.82
SCAF1-204ENST00000601038 ANKRD35Q8N283 1001 aa20.16■□□□□ 0.82
SCAF1-204ENST00000601038 CHURC1Q8WUH1 139 aa20.16■□□□□ 0.82
SCAF1-204ENST00000601038 HELLSQ9NRZ9 838 aa20.16■□□□□ 0.82
SCAF1-204ENST00000601038 FAM184BQ9ULE4 1060 aa20.16■□□□□ 0.82
SCAF1-204ENST00000601038 TSPY2A6NKD2 308 aa20.15■□□□□ 0.82
SCAF1-204ENST00000601038 SLC1A4P43007 532 aa20.15■□□□□ 0.82
SCAF1-204ENST00000601038 CTDSPL2Q05D32 466 aa20.15■□□□□ 0.82
SCAF1-204ENST00000601038 FAM160B2Q86V87 743 aa20.15■□□□□ 0.82
SCAF1-204ENST00000601038 TICAM2Q86XR7 235 aa20.15■□□□□ 0.82
SCAF1-204ENST00000601038 STAG1Q8WVM7 1258 aa20.15■□□□□ 0.82
SCAF1-204ENST00000601038 TSEN34Q9BSV6 310 aaKnown RBP20.15■□□□□ 0.82
SCAF1-204ENST00000601038 INCENPQ9NQS7 918 aa20.15■□□□□ 0.82
SCAF1-204ENST00000601038 PRDM5Q9NQX1 630 aaPredicted RBP20.15■□□□□ 0.82
SCAF1-204ENST00000601038 IL17RBQ9NRM6 502 aa20.15■□□□□ 0.82
SCAF1-204ENST00000601038 ANAPC4Q9UJX5 808 aa20.15■□□□□ 0.82
SCAF1-204ENST00000601038 PLA2G6O60733 806 aa20.14■□□□□ 0.81
SCAF1-204ENST00000601038 ADAMTS4O75173 837 aa20.14■□□□□ 0.81
SCAF1-204ENST00000601038 MCCP23508 829 aa20.14■□□□□ 0.81
SCAF1-204ENST00000601038 TLE2Q04725 743 aa20.14■□□□□ 0.81
SCAF1-204ENST00000601038 ALX1Q15699 326 aa20.14■□□□□ 0.81
SCAF1-204ENST00000601038 VPS53Q5VIR6 699 aa20.14■□□□□ 0.81
SCAF1-204ENST00000601038 Q7L0L9 218 aa20.14■□□□□ 0.81
SCAF1-204ENST00000601038 LENG1Q96BZ8 264 aaPredicted RBP20.14■□□□□ 0.81
SCAF1-204ENST00000601038 PDLIM7Q9NR12 457 aa20.14■□□□□ 0.81
SCAF1-204ENST00000601038 ISY1Q9ULR0 285 aaKnown RBP20.14■□□□□ 0.81
SCAF1-204ENST00000601038 STX8Q9UNK0 236 aa20.14■□□□□ 0.81
SCAF1-204ENST00000601038 A0A1W2PQ45 241 aaPredicted RBP20.13■□□□□ 0.81
SCAF1-204ENST00000601038 A0A1W2PQY0 241 aa20.13■□□□□ 0.81
SCAF1-204ENST00000601038 DUSP11O75319 330 aaKnown RBP20.13■□□□□ 0.81
SCAF1-204ENST00000601038 AAMPQ13685 434 aa20.13■□□□□ 0.81
SCAF1-204ENST00000601038 ACVR2BQ13705 512 aa20.13■□□□□ 0.81
SCAF1-204ENST00000601038 RCSD1Q6JBY9 416 aa20.13■□□□□ 0.81
SCAF1-204ENST00000601038 SH3RF1Q7Z6J0 888 aa20.13■□□□□ 0.81
SCAF1-204ENST00000601038 FGD4Q96M96 766 aa20.13■□□□□ 0.81
SCAF1-204ENST00000601038 ABHD16BQ9H3Z7 469 aa20.13■□□□□ 0.81
SCAF1-204ENST00000601038 MTMR10Q9NXD2 777 aa20.13■□□□□ 0.81
SCAF1-204ENST00000601038 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.13■□□□□ 0.81
SCAF1-204ENST00000601038 ZHX1Q9UKY1 873 aaPredicted RBP20.13■□□□□ 0.81
SCAF1-204ENST00000601038 TACC3Q9Y6A5 838 aa20.13■□□□□ 0.81
SCAF1-204ENST00000601038 DNAH12Q6ZR08 3092 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 ZNF536O15090 1300 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 SYNRGQ9UMZ2 1314 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms