RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 A0A0D9SFI3 127 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 ATP2A1O14983 1001 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 BMP8BP34820 402 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 MAGEA10P43363 369 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 SLFN13Q68D06 897 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 SMC5Q8IY18 1101 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 CPXCR1Q8N123 301 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 FAM227BQ96M60 508 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 TINF2Q9BSI4 451 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 SLC38A10Q9HBR0 1119 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 INCENPQ9NQS7 918 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 HELLSQ9NRZ9 838 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 FEM1BQ9UK73 627 aa17.85■□□□□ 0.45
SHKBP1-226ENST00000600791 ZBED4O75132 1171 aa17.84■□□□□ 0.45
SHKBP1-226ENST00000600791 BMP3P12645 472 aa17.84■□□□□ 0.45
SHKBP1-226ENST00000600791 ATN1P54259 1190 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-226ENST00000600791 ARRDC4Q8NCT1 418 aa17.84■□□□□ 0.45
SHKBP1-226ENST00000600791 RAVER2Q9HCJ3 691 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-226ENST00000600791 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
SHKBP1-226ENST00000600791 ANAPC4Q9UJX5 808 aa17.84■□□□□ 0.45
SHKBP1-226ENST00000600791 TACC3Q9Y6A5 838 aa17.84■□□□□ 0.45
SHKBP1-226ENST00000600791 SMCHD1A6NHR9 2005 aa17.83■□□□□ 0.45
SHKBP1-226ENST00000600791 TSPY2A6NKD2 308 aa17.83■□□□□ 0.44
SHKBP1-226ENST00000600791 KBTBD13C9JR72 458 aa17.83■□□□□ 0.44
SHKBP1-226ENST00000600791 SOX1O00570 391 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-226ENST00000600791 SLC4A3P48751 1232 aa17.83■□□□□ 0.44
SHKBP1-226ENST00000600791 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.44
SHKBP1-226ENST00000600791 GMCL1Q96IK5 515 aa17.83■□□□□ 0.44
SHKBP1-226ENST00000600791 STX8Q9UNK0 236 aa17.83■□□□□ 0.44
SHKBP1-226ENST00000600791 CTDP1Q9Y5B0 961 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-226ENST00000600791 DNAJC25-GNG10A0A024R161 153 aa17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 NMT2O60551 498 aa17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 TAL1P17542 331 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 STAT2P52630 851 aa17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 LRRC41Q15345 812 aa17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 ALX1Q15699 326 aa17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 MCMDC2Q4G0Z9 681 aa17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 ZNF589Q86UQ0 364 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 TICAM2Q86XR7 235 aa17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 RWDD1Q9H446 243 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 IL17RBQ9NRM6 502 aa17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 ISY1Q9ULR0 285 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-226ENST00000600791 TRIM6-TRIM34B2RNG4 842 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 TMEM232C9JQI7 657 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 ORC4O43929 436 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 RANBP6O60518 1105 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 ZNF865P0CJ78 1059 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 SLC1A4P43007 532 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 OAZ1P54368 228 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 NMIQ13287 307 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 PPP4R3BQ5MIZ7 849 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 RASGRP2Q7LDG7 609 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 CHD1LQ86WJ1 897 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 EXOC6Q8TAG9 804 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 CHMP4CQ96CF2 233 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 DDX11Q96FC9 970 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 XPNPEP3Q9NQH7 507 aa17.81■□□□□ 0.44
SHKBP1-226ENST00000600791 ZMYM6O95789 1325 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 IGHDP01880 384 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 FGAP02671 866 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 FGRP09769 529 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 RARBP10826 455 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 MCCP23508 829 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 RTP1P59025 263 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 FAM160B2Q86V87 743 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 MSL3Q8N5Y2 521 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 RILPL2Q969X0 211 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 LRCH3Q96II8 777 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 UBE2OQ9C0C9 1292 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 CNPY2Q9Y2B0 182 aa17.8■□□□□ 0.44
SHKBP1-226ENST00000600791 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 CCDC171Q6TFL3 1326 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 FDX1P10109 184 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 HSPD1P10809 573 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 AKR1A1P14550 325 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 ADCYAP1R1P41586 468 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 NOVP48745 357 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 MDM2Q00987 491 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 NUCB1Q02818 461 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 IKQ13123 557 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 MAMDC4Q6UXC1 1216 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 SLC39A5Q6ZMH5 540 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 TDHQ8IZJ6 230 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 ANKRD35Q8N283 1001 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 CHST13Q8NET6 341 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 CHURC1Q8WUH1 139 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 STAG1Q8WVM7 1258 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 LENG1Q96BZ8 264 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 FGD4Q96M96 766 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 HOMER2Q9NSB8 354 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 FBXO40Q9UH90 709 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 ATP11BQ9Y2G3 1177 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 MCM3APO60318 1980 aa17.79■□□□□ 0.44
SHKBP1-226ENST00000600791 ZNF536O15090 1300 aa17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 LAMA2P24043 3122 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 SNAI1O95863 264 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms