RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 BECN1Q14457 450 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 ME3Q16798 604 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 CCDC96Q2M329 555 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.13
TGFB1-204ENST00000600196 MICU3Q86XE3 530 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 SPICE1Q8N0Z3 855 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 GTF3C6Q969F1 213 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 PTPN18Q99952 460 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.13
TGFB1-204ENST00000600196 TANGO6Q9C0B7 1094 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 ASCC2Q9H1I8 757 aaPredicted RBP14.27□□□□□ -0.13
TGFB1-204ENST00000600196 FAM217BQ9NTX9 383 aaPredicted RBP14.27□□□□□ -0.13
TGFB1-204ENST00000600196 RABGAP1Q9Y3P9 1069 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 PTPRFP10586 1907 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 K7ELQ4 463 aaPredicted RBP14.26□□□□□ -0.13
TGFB1-204ENST00000600196 PRPF3O43395 683 aaKnown RBP14.26□□□□□ -0.13
TGFB1-204ENST00000600196 FLOT1O75955 427 aa14.26□□□□□ -0.13
TGFB1-204ENST00000600196 HMGN5P82970 282 aaKnown RBP14.26□□□□□ -0.13
TGFB1-204ENST00000600196 CUL4AQ13619 759 aa14.26□□□□□ -0.13
TGFB1-204ENST00000600196 ZYXQ15942 572 aaKnown RBP14.26□□□□□ -0.13
TGFB1-204ENST00000600196 NTRK3Q16288 839 aa14.26□□□□□ -0.13
TGFB1-204ENST00000600196 TRIM22Q8IYM9 498 aa14.26□□□□□ -0.13
TGFB1-204ENST00000600196 WASF1Q92558 559 aa14.26□□□□□ -0.13
TGFB1-204ENST00000600196 TMX3Q96JJ7 454 aa14.26□□□□□ -0.13
TGFB1-204ENST00000600196 SLC38A10Q9HBR0 1119 aa14.26□□□□□ -0.13
TGFB1-204ENST00000600196 ZFYVE28Q9HCC9 887 aa14.26□□□□□ -0.13
TGFB1-204ENST00000600196 KIF3AQ9Y496 699 aa14.26□□□□□ -0.13
TGFB1-204ENST00000600196 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.26□□□□□ -0.13
TGFB1-204ENST00000600196 STK36Q9NRP7 1315 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 PNMA6FA0A0J9YX94 578 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 VWA5AO00534 786 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 ZBTB5O15062 677 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 RAD21O60216 631 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 HERVK_113P62684 666 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 FUT2Q10981 343 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 SCRN1Q12765 414 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 TREML2Q5T2D2 321 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.25□□□□□ -0.13
TGFB1-204ENST00000600196 HSCBQ8IWL3 235 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 FAM43AQ8N2R8 423 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 DNAJC5GQ8N7S2 189 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 RRP36Q96EU6 259 aaKnown RBP14.25□□□□□ -0.13
TGFB1-204ENST00000600196 RANBP17Q9H2T7 1088 aaKnown RBP14.25□□□□□ -0.13
TGFB1-204ENST00000600196 MAP3K20Q9NYL2 800 aaKnown RBP14.25□□□□□ -0.13
TGFB1-204ENST00000600196 MORF4L1Q9UBU8 362 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 PRR12Q9ULL5 1215 aa14.25□□□□□ -0.13
TGFB1-204ENST00000600196 SPDYE16A6NNV3 312 aaPredicted RBP14.24□□□□□ -0.13
TGFB1-204ENST00000600196 IGF2BP3O00425 579 aaKnown RBP eCLIP14.24□□□□□ -0.13
TGFB1-204ENST00000600196 TLR2O60603 784 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 SLC25A27O95847 323 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 CDC27P30260 824 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 ADD1P35611 737 aaKnown RBP14.24□□□□□ -0.13
TGFB1-204ENST00000600196 CCNA1P78396 465 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
TGFB1-204ENST00000600196 KCTD1Q719H9 257 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 ADGRF4Q8IZF3 695 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 STAG2Q8N3U4 1231 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 SRBD1Q8N5C6 995 aaKnown RBP14.24□□□□□ -0.13
TGFB1-204ENST00000600196 SHCBP1Q8NEM2 672 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 P2RX7Q99572 595 aaKnown RBP14.24□□□□□ -0.13
TGFB1-204ENST00000600196 GLT8D2Q9H1C3 349 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 SH3GLB2Q9NR46 395 aa14.24□□□□□ -0.13
TGFB1-204ENST00000600196 CTDP1Q9Y5B0 961 aaPredicted RBP14.24□□□□□ -0.13
TGFB1-204ENST00000600196 THSD7BQ9C0I4 1608 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 DEXIO95424 95 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 FMNL1O95466 1100 aaPredicted RBP14.23□□□□□ -0.13
TGFB1-204ENST00000600196 ICAM1P05362 532 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 SSRP1Q08945 709 aaKnown RBP14.23□□□□□ -0.13
TGFB1-204ENST00000600196 IKQ13123 557 aaPredicted RBP14.23□□□□□ -0.13
TGFB1-204ENST00000600196 TAF1CQ15572 869 aaPredicted RBP14.23□□□□□ -0.13
TGFB1-204ENST00000600196 FAM110CQ1W6H9 321 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 NBPF11Q86T75 865 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
TGFB1-204ENST00000600196 CCDC12Q8WUD4 166 aaPredicted RBP14.23□□□□□ -0.13
TGFB1-204ENST00000600196 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
TGFB1-204ENST00000600196 MYL10Q9BUA6 226 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 AMNQ9BXJ7 453 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 JMJD4Q9H9V9 463 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 GPCPD1Q9NPB8 672 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 SEC63Q9UGP8 760 aaKnown RBP14.23□□□□□ -0.13
TGFB1-204ENST00000600196 FBXO40Q9UH90 709 aa14.23□□□□□ -0.13
TGFB1-204ENST00000600196 NAP1L2Q9ULW6 460 aaPredicted RBP14.23□□□□□ -0.13
TGFB1-204ENST00000600196 CYTH3O43739 400 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 GOLGA8HP0CJ92 632 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 XBP1P17861 261 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 CCT2P78371 535 aaKnown RBP14.22□□□□□ -0.13
TGFB1-204ENST00000600196 MKRN3Q13064 507 aaKnown RBP14.22□□□□□ -0.13
TGFB1-204ENST00000600196 MCTP2Q6DN12 878 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 TTBK2Q6IQ55 1244 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 GALNT17Q6IS24 598 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 PPP1R18Q6NYC8 613 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 C17orf99Q6UX52 265 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 JMYQ8N9B5 988 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 CHST13Q8NET6 341 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 REPS2Q8NFH8 660 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 GPRC5AQ8NFJ5 357 aa14.22□□□□□ -0.13
TGFB1-204ENST00000600196 KIFC2Q96AC6 838 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms