RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 SLC26A8Q96RN1 970 aa9.74□□□□□ -0.85
LINC00343-208ENST00000599264 ANTXR1Q9H6X2 564 aa9.74□□□□□ -0.85
LINC00343-208ENST00000599264 GPR160Q9UJ42 338 aa9.74□□□□□ -0.85
LINC00343-208ENST00000599264 TCFL5Q9UL49 500 aa9.74□□□□□ -0.85
LINC00343-208ENST00000599264 SIGLEC6O43699 453 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 ENDOUP21128 410 aaKnown RBP9.73□□□□□ -0.85
LINC00343-208ENST00000599264 IRF2BP1Q8IU81 584 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 LINC01599Q8WXQ3 324 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 ZNF512BQ96KM6 892 aaPredicted RBP9.73□□□□□ -0.85
LINC00343-208ENST00000599264 FOXP3Q9BZS1 431 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 PRDM14Q9GZV8 571 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 SP110Q9HB58 689 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 FBXL21Q9UKT6 434 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 ZNRF3Q9ULT6 936 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 PCDHB12Q9Y5F1 795 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 PBRM1Q86U86 1689 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 SOGA1O94964 1423 aa9.73□□□□□ -0.85
LINC00343-208ENST00000599264 GRIN2BQ13224 1484 aa9.72□□□□□ -0.85
LINC00343-208ENST00000599264 PRAMEF1O95521 474 aa9.72□□□□□ -0.85
LINC00343-208ENST00000599264 SLC14A2Q15849 920 aa9.72□□□□□ -0.85
LINC00343-208ENST00000599264 ZSCAN18Q8TBC5 510 aaPredicted RBP9.72□□□□□ -0.85
LINC00343-208ENST00000599264 CHST7Q9NS84 486 aa9.72□□□□□ -0.85
LINC00343-208ENST00000599264 ZNF281Q9Y2X9 895 aa9.72□□□□□ -0.85
LINC00343-208ENST00000599264 SCAMP3O14828 347 aaKnown RBP9.71□□□□□ -0.86
LINC00343-208ENST00000599264 SYPP08247 313 aa9.71□□□□□ -0.86
LINC00343-208ENST00000599264 VAMP1P23763 118 aa9.71□□□□□ -0.86
LINC00343-208ENST00000599264 SNW1Q13573 536 aaKnown RBP9.71□□□□□ -0.86
LINC00343-208ENST00000599264 KRTAP19-4Q3LI73 84 aa9.71□□□□□ -0.86
LINC00343-208ENST00000599264 ZNF394Q53GI3 561 aa9.71□□□□□ -0.86
LINC00343-208ENST00000599264 TMEM192Q8IY95 271 aa9.71□□□□□ -0.86
LINC00343-208ENST00000599264 SLC9A7Q96T83 725 aa9.71□□□□□ -0.86
LINC00343-208ENST00000599264 YBX2Q9Y2T7 364 aaKnown RBP9.71□□□□□ -0.86
LINC00343-208ENST00000599264 PCDHGB7Q9Y5F8 929 aa9.71□□□□□ -0.86
LINC00343-208ENST00000599264 KIR2DL1P43626 348 aaPredicted RBP9.7□□□□□ -0.86
LINC00343-208ENST00000599264 KIR2DL2P43627 348 aaPredicted RBP9.7□□□□□ -0.86
LINC00343-208ENST00000599264 FBXW10Q5XX13 1052 aa9.7□□□□□ -0.86
LINC00343-208ENST00000599264 KCNN1Q92952 543 aa9.7□□□□□ -0.86
LINC00343-208ENST00000599264 INTS4Q96HW7 963 aaKnown RBP9.7□□□□□ -0.86
LINC00343-208ENST00000599264 MAP6Q96JE9 813 aa9.7□□□□□ -0.86
LINC00343-208ENST00000599264 TM9SF2Q99805 663 aa9.7□□□□□ -0.86
LINC00343-208ENST00000599264 PRR13Q9NZ81 148 aa9.7□□□□□ -0.86
LINC00343-208ENST00000599264 KDM6BO15054 1643 aa9.7□□□□□ -0.86
LINC00343-208ENST00000599264 TSPOAP1O95153 1857 aa9.69□□□□□ -0.86
LINC00343-208ENST00000599264 PDE6BP35913 854 aa9.69□□□□□ -0.86
LINC00343-208ENST00000599264 AUHQ13825 339 aaKnown RBP9.69□□□□□ -0.86
LINC00343-208ENST00000599264 TIGD5Q53EQ6 642 aa9.69□□□□□ -0.86
LINC00343-208ENST00000599264 ZNF654Q8IZM8 581 aa9.69□□□□□ -0.86
LINC00343-208ENST00000599264 TAB3Q8N5C8 712 aaPredicted RBP9.69□□□□□ -0.86
LINC00343-208ENST00000599264 SPATA32Q96LK8 384 aa9.69□□□□□ -0.86
LINC00343-208ENST00000599264 G6PC3Q9BUM1 346 aa9.69□□□□□ -0.86
LINC00343-208ENST00000599264 SUCOQ9UBS9 1254 aaKnown RBP9.69□□□□□ -0.86
LINC00343-208ENST00000599264 DDX41Q9UJV9 622 aaKnown RBP9.69□□□□□ -0.86
LINC00343-208ENST00000599264 CEP170Q5SW79 1584 aa9.68□□□□□ -0.86
LINC00343-208ENST00000599264 HECW2Q9P2P5 1572 aa9.68□□□□□ -0.86
LINC00343-208ENST00000599264 TCAF2A6NFQ2 919 aa9.68□□□□□ -0.86
LINC00343-208ENST00000599264 C1QTNF9P0C862 333 aa9.68□□□□□ -0.86
LINC00343-208ENST00000599264 COL9A2Q14055 689 aaPredicted RBP9.68□□□□□ -0.86
LINC00343-208ENST00000599264 CCDC144CPQ8IYA2 1237 aa9.68□□□□□ -0.86
LINC00343-208ENST00000599264 SMARCC1Q92922 1105 aaPredicted RBP9.68□□□□□ -0.86
LINC00343-208ENST00000599264 FGD5Q6ZNL6 1462 aa9.67□□□□□ -0.86
LINC00343-208ENST00000599264 FKTNO75072 461 aa9.67□□□□□ -0.86
LINC00343-208ENST00000599264 GLDCP23378 1020 aa9.67□□□□□ -0.86
LINC00343-208ENST00000599264 CEP128Q6ZU80 1094 aa9.67□□□□□ -0.86
LINC00343-208ENST00000599264 GFOD1Q9NXC2 390 aa9.67□□□□□ -0.86
LINC00343-208ENST00000599264 EBF1Q9UH73 591 aa9.67□□□□□ -0.86
LINC00343-208ENST00000599264 ABCC10Q5T3U5 1492 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 PSPNO60542 156 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 PEX10O60683 326 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 USP2O75604 605 aaPredicted RBP9.66□□□□□ -0.86
LINC00343-208ENST00000599264 BMP8BP34820 402 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 BBS9Q3SYG4 887 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 FCRL2Q96LA5 508 aaPredicted RBP9.66□□□□□ -0.86
LINC00343-208ENST00000599264 CRBNQ96SW2 442 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 DSCC1Q9BVC3 393 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 TNFRSF10DQ9UBN6 386 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 SHROOM2Q13796 1616 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 DIP2BQ9P265 1576 aa9.66□□□□□ -0.86
LINC00343-208ENST00000599264 FAM86C2PA6NEL3 165 aa9.65□□□□□ -0.86
LINC00343-208ENST00000599264 NRDCO43847 1150 aa9.65□□□□□ -0.86
LINC00343-208ENST00000599264 RECKO95980 971 aa9.65□□□□□ -0.86
LINC00343-208ENST00000599264 MED14OSP0DP75 135 aa9.65□□□□□ -0.86
LINC00343-208ENST00000599264 PMS1P54277 932 aaKnown RBP9.65□□□□□ -0.86
LINC00343-208ENST00000599264 TMEM132EQ6IEE7 984 aa9.65□□□□□ -0.86
LINC00343-208ENST00000599264 ATG14Q6ZNE5 492 aa9.65□□□□□ -0.86
LINC00343-208ENST00000599264 ZNF605Q86T29 641 aa9.65□□□□□ -0.86
LINC00343-208ENST00000599264 C7orf61Q8IZ16 206 aa9.65□□□□□ -0.86
LINC00343-208ENST00000599264 RBBP8NLQ8NC74 664 aaPredicted RBP9.65□□□□□ -0.86
LINC00343-208ENST00000599264 CRTAC1Q9NQ79 661 aa9.65□□□□□ -0.86
LINC00343-208ENST00000599264 TMEM82A0PJX8 343 aa9.64□□□□□ -0.87
LINC00343-208ENST00000599264 OR14I1A6ND48 311 aa9.64□□□□□ -0.87
LINC00343-208ENST00000599264 ETV2O00321 342 aaPredicted RBP9.64□□□□□ -0.87
LINC00343-208ENST00000599264 MEIS1O00470 390 aa9.64□□□□□ -0.87
LINC00343-208ENST00000599264 ACRP10323 421 aa9.64□□□□□ -0.87
LINC00343-208ENST00000599264 RACK1P63244 317 aaKnown RBP9.64□□□□□ -0.87
LINC00343-208ENST00000599264 CWF19L1Q69YN2 538 aaKnown RBP9.64□□□□□ -0.87
LINC00343-208ENST00000599264 NLRX1Q86UT6 975 aa9.64□□□□□ -0.87
LINC00343-208ENST00000599264 LRRC56Q8IYG6 542 aaPredicted RBP9.64□□□□□ -0.87
LINC00343-208ENST00000599264 KCNK12Q9HB15 430 aa9.64□□□□□ -0.87
LINC00343-208ENST00000599264 SEMA7AO75326 666 aa9.63□□□□□ -0.87
LINC00343-208ENST00000599264 KRT1P04264 644 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms