RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ABRAQ8N0Z2 381 aa16.79■□□□□ 0.28
SHKBP1-218ENST00000598907 ATG4CQ96DT6 458 aa16.79■□□□□ 0.28
SHKBP1-218ENST00000598907 MMP19Q99542 508 aa16.79■□□□□ 0.28
SHKBP1-218ENST00000598907 MTCH2Q9Y6C9 303 aa16.79■□□□□ 0.28
SHKBP1-218ENST00000598907 MOXD2PA6NHM9 499 aa16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 ZBBXA8MT70 800 aa16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 SURF6O75683 361 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 ZNF865P0CJ78 1059 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 ARID4AP29374 1257 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 CENPQQ7L2Z9 268 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 CABP5Q9NP86 173 aa16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 CD320Q9NPF0 282 aa16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 HOXC10Q9NYD6 342 aa16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 COG5Q9UP83 839 aa16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 CNPY2Q9Y2B0 182 aa16.78■□□□□ 0.28
SHKBP1-218ENST00000598907 UMODL1Q5DID0 1318 aa16.77■□□□□ 0.28
SHKBP1-218ENST00000598907 ZNFX1Q9P2E3 1918 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-218ENST00000598907 C6orf222P0C671 652 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-218ENST00000598907 PPP4CP60510 307 aa16.77■□□□□ 0.28
SHKBP1-218ENST00000598907 NHLH1Q02575 133 aa16.77■□□□□ 0.28
SHKBP1-218ENST00000598907 SEPT2Q15019 361 aa16.77■□□□□ 0.28
SHKBP1-218ENST00000598907 SERPINB13Q9UIV8 391 aa16.77■□□□□ 0.28
SHKBP1-218ENST00000598907 ZHX1Q9UKY1 873 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-218ENST00000598907 EXOC6BQ9Y2D4 811 aa16.77■□□□□ 0.28
SHKBP1-218ENST00000598907 PRR33A8MZF0 331 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 PI4K2BG5E9Z4 385 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 TLR3O15455 904 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 RAB11FIP3O75154 756 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 FLOT1O75955 427 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 USP5P45974 858 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 KCTD2Q14681 263 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 FAM126BQ8IXS8 530 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 MB21D1Q8N884 522 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 KLHDC9Q8NEP7 349 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 HLA-CQ95604 372 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 PCDHA11Q9Y5I1 949 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 SLC4A7Q9Y6M7 1214 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 TRANK1O15050 2925 aa16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 MYO5AQ9Y4I1 1855 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-218ENST00000598907 A0A0U1RQG5 324 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 EPOPA6NHQ4 379 aa16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 ASGR1P07306 291 aa16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 CA3P07451 260 aa16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 GUCY1A2P33402 732 aa16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 CDK7P50613 346 aa16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 CCL23P55773 120 aa16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 G3BP1Q13283 466 aaKnown RBP eCLIP16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 CCSAPQ6IQ19 270 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 SPICE1Q8N0Z3 855 aa16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 HIPK3Q9H422 1215 aa16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 COL11A1P12107 1806 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-218ENST00000598907 ELP1O95163 1332 aa16.74■□□□□ 0.27
SHKBP1-218ENST00000598907 ARVCFO00192 962 aa16.74■□□□□ 0.27
SHKBP1-218ENST00000598907 DSG3P32926 999 aa16.74■□□□□ 0.27
SHKBP1-218ENST00000598907 SHMT1P34896 483 aa16.74■□□□□ 0.27
SHKBP1-218ENST00000598907 KIAA1755Q5JYT7 1200 aa16.74■□□□□ 0.27
SHKBP1-218ENST00000598907 MIGA1Q8NAN2 632 aa16.74■□□□□ 0.27
SHKBP1-218ENST00000598907 ARNTL2Q8WYA1 636 aa16.74■□□□□ 0.27
SHKBP1-218ENST00000598907 FAM184BQ9ULE4 1060 aa16.74■□□□□ 0.27
SHKBP1-218ENST00000598907 COL4A4P53420 1690 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-218ENST00000598907 PARP14Q460N5 1801 aa16.73■□□□□ 0.27
SHKBP1-218ENST00000598907 ATP2A2P16615 1042 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-218ENST00000598907 TMEM132BQ14DG7 1078 aa16.73■□□□□ 0.27
SHKBP1-218ENST00000598907 CSPP1Q1MSJ5 1256 aa16.73■□□□□ 0.27
SHKBP1-218ENST00000598907 ZNF792Q3KQV3 632 aa16.73■□□□□ 0.27
SHKBP1-218ENST00000598907 ERC1Q8IUD2 1116 aa16.73■□□□□ 0.27
SHKBP1-218ENST00000598907 RHPN1Q8TCX5 695 aa16.73■□□□□ 0.27
SHKBP1-218ENST00000598907 EHD4Q9H223 541 aa16.73■□□□□ 0.27
SHKBP1-218ENST00000598907 UQCRFS1P1P0C7P4 283 aa16.72■□□□□ 0.27
SHKBP1-218ENST00000598907 NUCB1Q02818 461 aa16.72■□□□□ 0.27
SHKBP1-218ENST00000598907 CLEC10AQ8IUN9 316 aa16.72■□□□□ 0.27
SHKBP1-218ENST00000598907 PCSK9Q8NBP7 692 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-218ENST00000598907 KIF1BPQ96EK5 621 aa16.72■□□□□ 0.27
SHKBP1-218ENST00000598907 ADCY6O43306 1168 aa16.71■□□□□ 0.27
SHKBP1-218ENST00000598907 SLC25A27O95847 323 aa16.71■□□□□ 0.27
SHKBP1-218ENST00000598907 CYP7A1P22680 504 aa16.71■□□□□ 0.27
SHKBP1-218ENST00000598907 SSTR3P32745 418 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-218ENST00000598907 TMEM67Q5HYA8 995 aa16.71■□□□□ 0.27
SHKBP1-218ENST00000598907 TTC39AQ5SRH9 613 aa16.71■□□□□ 0.27
SHKBP1-218ENST00000598907 FBXL18Q96ME1 805 aa16.71■□□□□ 0.27
SHKBP1-218ENST00000598907 LRRCC1Q9C099 1032 aa16.71■□□□□ 0.27
SHKBP1-218ENST00000598907 NAV1Q8NEY1 1877 aa16.71■□□□□ 0.27
SHKBP1-218ENST00000598907 DUSP11O75319 330 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 CD4P01730 458 aa16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 POU3F3P20264 500 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 CST5P28325 142 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 GNASQ5JWF2 1037 aa16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 TTC6Q86TZ1 520 aa16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 SCLYQ96I15 445 aa16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 SPC25Q9HBM1 224 aa16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 GPR108Q9NPR9 543 aa16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 PIH1D3Q9NQM4 214 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-218ENST00000598907 ARHGEF15O94989 841 aa16.69■□□□□ 0.26
SHKBP1-218ENST00000598907 SNAI1O95863 264 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms