RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 MAP3K21Q5TCX8 1036 aa20.75■□□□□ 0.91
USHBP1-209ENST00000598570 TRMT44Q8IYL2 757 aaKnown RBP20.75■□□□□ 0.91
USHBP1-209ENST00000598570 TMEM232C9JQI7 657 aa20.74■□□□□ 0.91
USHBP1-209ENST00000598570 EPB41L2O43491 1005 aaKnown RBP20.74■□□□□ 0.91
USHBP1-209ENST00000598570 STAT2P52630 851 aa20.74■□□□□ 0.91
USHBP1-209ENST00000598570 MAP2K5Q13163 448 aa20.74■□□□□ 0.91
USHBP1-209ENST00000598570 MB21D2Q8IYB1 491 aaPredicted RBP20.74■□□□□ 0.91
USHBP1-209ENST00000598570 SH3TC2Q8TF17 1288 aa20.74■□□□□ 0.91
USHBP1-209ENST00000598570 TEX13BQ9BXU2 312 aa20.74■□□□□ 0.91
USHBP1-209ENST00000598570 ZNF536O15090 1300 aa20.74■□□□□ 0.91
USHBP1-209ENST00000598570 SLC27A2O14975 620 aa20.73■□□□□ 0.91
USHBP1-209ENST00000598570 CAPN2P17655 700 aa20.73■□□□□ 0.91
USHBP1-209ENST00000598570 ZNF543Q08ER8 600 aa20.73■□□□□ 0.91
USHBP1-209ENST00000598570 NCOA7Q8NI08 942 aa20.73■□□□□ 0.91
USHBP1-209ENST00000598570 IGDCC4Q8TDY8 1250 aa20.73■□□□□ 0.91
USHBP1-209ENST00000598570 ZBED4O75132 1171 aa20.72■□□□□ 0.91
USHBP1-209ENST00000598570 RGS2P41220 211 aa20.72■□□□□ 0.91
USHBP1-209ENST00000598570 CREB3L3Q68CJ9 461 aa20.72■□□□□ 0.91
USHBP1-209ENST00000598570 CASC1Q6TDU7 716 aa20.72■□□□□ 0.91
USHBP1-209ENST00000598570 ZKSCAN3Q9BRR0 538 aa20.72■□□□□ 0.91
USHBP1-209ENST00000598570 PRR12Q9ULL5 1215 aa20.72■□□□□ 0.91
USHBP1-209ENST00000598570 TNKSO95271 1327 aa20.72■□□□□ 0.91
USHBP1-209ENST00000598570 ECM2O94769 699 aaPredicted RBP20.71■□□□□ 0.91
USHBP1-209ENST00000598570 ELNP15502 786 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 ANTXR2P58335 489 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 TRDNQ13061 729 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 KCTD1Q719H9 257 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 RASGRP2Q7LDG7 609 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 PNMA1Q8ND90 353 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 TRIB2Q92519 343 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 APBA2Q99767 749 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 DIS3Q9Y2L1 958 aaKnown RBP20.71■□□□□ 0.91
USHBP1-209ENST00000598570 RIPK3Q9Y572 518 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 BRCA2P51587 3418 aa20.71■□□□□ 0.91
USHBP1-209ENST00000598570 DNAJC25-GNG10A0A024R161 153 aa20.7■□□□□ 0.9
USHBP1-209ENST00000598570 RAD21O60216 631 aa20.7■□□□□ 0.9
USHBP1-209ENST00000598570 HMGCRP04035 888 aa20.7■□□□□ 0.9
USHBP1-209ENST00000598570 GPATCH4Q5T3I0 446 aaKnown RBP20.7■□□□□ 0.9
USHBP1-209ENST00000598570 CCAR1Q8IX12 1150 aaKnown RBP20.7■□□□□ 0.9
USHBP1-209ENST00000598570 KIFC2Q96AC6 838 aa20.7■□□□□ 0.9
USHBP1-209ENST00000598570 RANBP17Q9H2T7 1088 aaKnown RBP20.7■□□□□ 0.9
USHBP1-209ENST00000598570 ANO2Q9NQ90 1003 aa20.7■□□□□ 0.9
USHBP1-209ENST00000598570 PAK6Q9NQU5 681 aaPredicted RBP20.7■□□□□ 0.9
USHBP1-209ENST00000598570 COBLO75128 1261 aa20.69■□□□□ 0.9
USHBP1-209ENST00000598570 GJB1P08034 283 aa20.69■□□□□ 0.9
USHBP1-209ENST00000598570 MTFR1Q15390 333 aa20.69■□□□□ 0.9
USHBP1-209ENST00000598570 OLFML2BQ68BL8 750 aa20.69■□□□□ 0.9
USHBP1-209ENST00000598570 TTBK2Q6IQ55 1244 aa20.69■□□□□ 0.9
USHBP1-209ENST00000598570 UBAC1Q9BSL1 405 aa20.69■□□□□ 0.9
USHBP1-209ENST00000598570 TNRC18O15417 2968 aaPredicted RBP20.69■□□□□ 0.9
USHBP1-209ENST00000598570 SMCHD1A6NHR9 2005 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 POTEFA5A3E0 1075 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 INHAP05111 366 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 FCER1AP12319 257 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 CYP2B6P20813 491 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 ADORA2AP29274 412 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 UBXN2AP68543 259 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 COL9A3Q14050 684 aaPredicted RBP20.68■□□□□ 0.9
USHBP1-209ENST00000598570 TKFCQ3LXA3 575 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 CHST13Q8NET6 341 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 NPLOC4Q8TAT6 608 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 KAT14Q9H8E8 782 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 IVNS1ABPQ9Y6Y0 642 aa20.68■□□□□ 0.9
USHBP1-209ENST00000598570 CCL5P13501 91 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 EXOSC10Q01780 885 aaKnown RBP20.67■□□□□ 0.9
USHBP1-209ENST00000598570 TROAPQ12815 778 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 PLS1Q14651 629 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 ZNF792Q3KQV3 632 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 SYDE2Q5VT97 1194 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 SNRNP48Q6IEG0 339 aaKnown RBP20.67■□□□□ 0.9
USHBP1-209ENST00000598570 NCAPG2Q86XI2 1143 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 RASEFQ8IZ41 740 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 MAP3K14Q99558 947 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 CRISPLD2Q9H0B8 497 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 FLRT1Q9NZU1 646 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 FBXO40Q9UH90 709 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 PNMA2Q9UL42 364 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 WDR19Q8NEZ3 1342 aa20.67■□□□□ 0.9
USHBP1-209ENST00000598570 PALM3A6NDB9 673 aaPredicted RBP20.66■□□□□ 0.9
USHBP1-209ENST00000598570 CAPN15O75808 1086 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 ICAM1P05362 532 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 HSPA4P34932 840 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 GJA8P48165 433 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 CCL14Q16627 93 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 ASPRV1Q53RT3 343 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 IFIT1BQ5T764 474 aaKnown RBP20.66■□□□□ 0.9
USHBP1-209ENST00000598570 RNF20Q5VTR2 975 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 RALYLQ86SE5 291 aaKnown RBP20.66■□□□□ 0.9
USHBP1-209ENST00000598570 MTMR8Q96EF0 704 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 MAF1Q9H063 256 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 UNC93B1Q9H1C4 597 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 RAVER2Q9HCJ3 691 aaKnown RBP20.66■□□□□ 0.9
USHBP1-209ENST00000598570 RPTORQ8N122 1335 aa20.66■□□□□ 0.9
USHBP1-209ENST00000598570 MCM5P33992 734 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 LIFRP42702 1097 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 SOX10P56693 466 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 TRIM32Q13049 653 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 UBE2Q1Q7Z7E8 422 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 TMTC2Q8N394 836 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 TMEM87BQ96K49 555 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms