RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 RBM8AQ9Y5S9 174 aaKnown RBP19.69■□□□□ 0.74
SSBP4-204ENST00000597724 TAF6LQ9Y6J9 622 aa19.69■□□□□ 0.74
SSBP4-204ENST00000597724 RBBP6Q7Z6E9 1792 aaKnown RBP19.68■□□□□ 0.74
SSBP4-204ENST00000597724 ATP2A1O14983 1001 aa19.68■□□□□ 0.74
SSBP4-204ENST00000597724 CCL5P13501 91 aa19.68■□□□□ 0.74
SSBP4-204ENST00000597724 STAT2P52630 851 aa19.68■□□□□ 0.74
SSBP4-204ENST00000597724 RASGRP2Q7LDG7 609 aa19.68■□□□□ 0.74
SSBP4-204ENST00000597724 FAM160B2Q86V87 743 aa19.68■□□□□ 0.74
SSBP4-204ENST00000597724 NCAPG2Q86XI2 1143 aa19.68■□□□□ 0.74
SSBP4-204ENST00000597724 ANKS1AQ92625 1134 aa19.68■□□□□ 0.74
SSBP4-204ENST00000597724 SLC38A10Q9HBR0 1119 aa19.68■□□□□ 0.74
SSBP4-204ENST00000597724 ISY1Q9ULR0 285 aaKnown RBP19.68■□□□□ 0.74
SSBP4-204ENST00000597724 MTMR7Q9Y216 660 aa19.68■□□□□ 0.74
SSBP4-204ENST00000597724 TNRC18O15417 2968 aaPredicted RBP19.67■□□□□ 0.74
SSBP4-204ENST00000597724 CDC45O75419 566 aa19.67■□□□□ 0.74
SSBP4-204ENST00000597724 HMGCRP04035 888 aa19.67■□□□□ 0.74
SSBP4-204ENST00000597724 FDX1P10109 184 aa19.67■□□□□ 0.74
SSBP4-204ENST00000597724 TRDNQ13061 729 aa19.67■□□□□ 0.74
SSBP4-204ENST00000597724 TRMT44Q8IYL2 757 aaKnown RBP19.67■□□□□ 0.74
SSBP4-204ENST00000597724 ABRAQ8N0Z2 381 aa19.67■□□□□ 0.74
SSBP4-204ENST00000597724 TRIB2Q92519 343 aa19.67■□□□□ 0.74
SSBP4-204ENST00000597724 APBA2Q99767 749 aa19.67■□□□□ 0.74
SSBP4-204ENST00000597724 TEX13BQ9BXU2 312 aa19.67■□□□□ 0.74
SSBP4-204ENST00000597724 E7EWF7 191 aa19.66■□□□□ 0.74
SSBP4-204ENST00000597724 HOXC6P09630 235 aa19.66■□□□□ 0.74
SSBP4-204ENST00000597724 PDHBP11177 359 aa19.66■□□□□ 0.74
SSBP4-204ENST00000597724 IKQ13123 557 aaPredicted RBP19.66■□□□□ 0.74
SSBP4-204ENST00000597724 CCL14Q16627 93 aa19.66■□□□□ 0.74
SSBP4-204ENST00000597724 CASC1Q6TDU7 716 aa19.66■□□□□ 0.74
SSBP4-204ENST00000597724 CYB5R4Q7L1T6 521 aa19.66■□□□□ 0.74
SSBP4-204ENST00000597724 ENAHQ8N8S7 591 aaPredicted RBP19.66■□□□□ 0.74
SSBP4-204ENST00000597724 RNF208Q9H0X6 261 aa19.66■□□□□ 0.74
SSBP4-204ENST00000597724 CTDP1Q9Y5B0 961 aaPredicted RBP19.66■□□□□ 0.74
SSBP4-204ENST00000597724 SNHG28P0DPA3 235 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 FCER1AP12319 257 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 ADORA2AP29274 412 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 COPB2P35606 906 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 TRIM32Q13049 653 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 CCDC96Q2M329 555 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 SNRNP48Q6IEG0 339 aaKnown RBP19.65■□□□□ 0.74
SSBP4-204ENST00000597724 BTNL9Q6UXG8 535 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 CPXCR1Q8N123 301 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 UBAC1Q9BSL1 405 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 UNC93B1Q9H1C4 597 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 RAVER2Q9HCJ3 691 aaKnown RBP19.65■□□□□ 0.74
SSBP4-204ENST00000597724 ANO2Q9NQ90 1003 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 TNKSO95271 1327 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 ZNF236Q9UL36 1845 aa19.65■□□□□ 0.74
SSBP4-204ENST00000597724 GJB1P08034 283 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 ZKSCAN1P17029 563 aaPredicted RBP19.64■□□□□ 0.73
SSBP4-204ENST00000597724 EN2P19622 333 aaPredicted RBP19.64■□□□□ 0.73
SSBP4-204ENST00000597724 OAZ1P54368 228 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 MLLT1Q03111 559 aaPredicted RBP19.64■□□□□ 0.73
SSBP4-204ENST00000597724 NECTIN1Q15223 517 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 TTBK2Q6IQ55 1244 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 STOX1Q6ZVD7 989 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 DPP9Q86TI2 863 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 PNMA1Q8ND90 353 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 NPLOC4Q8TAT6 608 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 KAT14Q9H8E8 782 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 PRR12Q9ULL5 1215 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 RIPK3Q9Y572 518 aa19.64■□□□□ 0.73
SSBP4-204ENST00000597724 MKI67P46013 3256 aaKnown RBP19.63■□□□□ 0.73
SSBP4-204ENST00000597724 ZNFX1Q9P2E3 1918 aaKnown RBP19.63■□□□□ 0.73
SSBP4-204ENST00000597724 ZNF536O15090 1300 aa19.63■□□□□ 0.73
SSBP4-204ENST00000597724 COBLO75128 1261 aa19.63■□□□□ 0.73
SSBP4-204ENST00000597724 ZNF543Q08ER8 600 aa19.63■□□□□ 0.73
SSBP4-204ENST00000597724 SEC23AQ15436 765 aa19.63■□□□□ 0.73
SSBP4-204ENST00000597724 MAP3K21Q5TCX8 1036 aa19.63■□□□□ 0.73
SSBP4-204ENST00000597724 RALYLQ86SE5 291 aaKnown RBP19.63■□□□□ 0.73
SSBP4-204ENST00000597724 NCOA7Q8NI08 942 aa19.63■□□□□ 0.73
SSBP4-204ENST00000597724 GPCPD1Q9NPB8 672 aa19.63■□□□□ 0.73
SSBP4-204ENST00000597724 FLRT1Q9NZU1 646 aa19.63■□□□□ 0.73
SSBP4-204ENST00000597724 FRMPD2Q68DX3 1309 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-204ENST00000597724 RPTORQ8N122 1335 aa19.62■□□□□ 0.73
SSBP4-204ENST00000597724 SLC27A2O14975 620 aa19.62■□□□□ 0.73
SSBP4-204ENST00000597724 IGHA2P01877 340 aa19.62■□□□□ 0.73
SSBP4-204ENST00000597724 SLC16A2P36021 539 aa19.62■□□□□ 0.73
SSBP4-204ENST00000597724 MMP19Q99542 508 aa19.62■□□□□ 0.73
SSBP4-204ENST00000597724 PAK6Q9NQU5 681 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-204ENST00000597724 SLC5A4Q9NY91 659 aa19.62■□□□□ 0.73
SSBP4-204ENST00000597724 PRKAR2AP13861 404 aaKnown RBP19.61■□□□□ 0.73
SSBP4-204ENST00000597724 GJA8P48165 433 aa19.61■□□□□ 0.73
SSBP4-204ENST00000597724 SLC4A3P48751 1232 aa19.61■□□□□ 0.73
SSBP4-204ENST00000597724 CACNB2Q08289 660 aaPredicted RBP19.61■□□□□ 0.73
SSBP4-204ENST00000597724 KCTD2Q14681 263 aa19.61■□□□□ 0.73
SSBP4-204ENST00000597724 GPATCH4Q5T3I0 446 aaKnown RBP19.61■□□□□ 0.73
SSBP4-204ENST00000597724 IFIT1BQ5T764 474 aaKnown RBP19.61■□□□□ 0.73
SSBP4-204ENST00000597724 SYDE2Q5VT97 1194 aa19.61■□□□□ 0.73
SSBP4-204ENST00000597724 CREB3L3Q68CJ9 461 aa19.61■□□□□ 0.73
SSBP4-204ENST00000597724 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.61■□□□□ 0.738e-7■■■■□ 26.7
SSBP4-204ENST00000597724 HMX1Q9NP08 348 aaPredicted RBP19.61■□□□□ 0.73
SSBP4-204ENST00000597724 SNAP25P60880 206 aa19.6■□□□□ 0.73
SSBP4-204ENST00000597724 MFSD14CQ5VZR4 134 aa19.6■□□□□ 0.73
SSBP4-204ENST00000597724 OLFML2BQ68BL8 750 aa19.6■□□□□ 0.73
SSBP4-204ENST00000597724 MB21D2Q8IYB1 491 aaPredicted RBP19.6■□□□□ 0.73
SSBP4-204ENST00000597724 CHST13Q8NET6 341 aa19.6■□□□□ 0.73
SSBP4-204ENST00000597724 U2AF1L4Q8WU68 220 aaKnown RBP19.6■□□□□ 0.73
SSBP4-204ENST00000597724 SHISA4Q96DD7 197 aa19.6■□□□□ 0.73
SSBP4-204ENST00000597724 AGBL1Q96MI9 1066 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms