RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 CYP46A1Q9Y6A2 500 aa22.57■■□□□ 1.2
PNKP-207ENST00000596014 PARP1P09874 1014 aaKnown RBP22.56■■□□□ 1.2
PNKP-207ENST00000596014 FGD1P98174 961 aa22.56■■□□□ 1.2
PNKP-207ENST00000596014 ASPRV1Q53RT3 343 aa22.56■■□□□ 1.2
PNKP-207ENST00000596014 Q6ZUG5 572 aa22.56■■□□□ 1.2
PNKP-207ENST00000596014 CD99L2Q8TCZ2 262 aa22.56■■□□□ 1.2
PNKP-207ENST00000596014 ERO1AQ96HE7 468 aa22.56■■□□□ 1.2
PNKP-207ENST00000596014 UPF3BQ9BZI7 483 aaKnown RBP22.56■■□□□ 1.2
PNKP-207ENST00000596014 MGAMO43451 1857 aa22.56■■□□□ 1.2
PNKP-207ENST00000596014 SLC16A2P36021 539 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 FBXL16Q8N461 479 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 C22orf23Q9BZE7 217 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 PRR12Q9ULL5 1215 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 CAP1Q01518 475 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 TMEM132BQ14DG7 1078 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 REPS2Q8NFH8 660 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 NUP133Q8WUM0 1156 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 MYL10Q9BUA6 226 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 SLC38A10Q9HBR0 1119 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 SLC12A7Q9Y666 1083 aa22.55■■□□□ 1.2
PNKP-207ENST00000596014 DOCK3Q8IZD9 2030 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 ZSWIM8A7E2V4 1837 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 PALM3A6NDB9 673 aaPredicted RBP22.54■■□□□ 1.2
PNKP-207ENST00000596014 DDAH1O94760 285 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 ECM2O94769 699 aaPredicted RBP22.54■■□□□ 1.2
PNKP-207ENST00000596014 CTGFP29279 349 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 KIF22Q14807 665 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 GRM4Q14833 912 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 STAG2Q8N3U4 1231 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 AGXT2Q9BYV1 514 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 ARHGAP39Q9C0H5 1083 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 UPF2Q9HAU5 1272 aaKnown RBP22.54■■□□□ 1.2
PNKP-207ENST00000596014 MAD2L2Q9UI95 211 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 BRPF3Q9ULD4 1205 aa22.54■■□□□ 1.2
PNKP-207ENST00000596014 ZBED4O75132 1171 aa22.53■■□□□ 1.2
PNKP-207ENST00000596014 FDX1P10109 184 aa22.53■■□□□ 1.2
PNKP-207ENST00000596014 PSMC4P43686 418 aa22.53■■□□□ 1.2
PNKP-207ENST00000596014 SYDE2Q5VT97 1194 aa22.53■■□□□ 1.2
PNKP-207ENST00000596014 BRF1Q92994 677 aa22.53■■□□□ 1.2
PNKP-207ENST00000596014 MAP3K14Q99558 947 aa22.53■■□□□ 1.2
PNKP-207ENST00000596014 UBA5Q9GZZ9 404 aa22.53■■□□□ 1.2
PNKP-207ENST00000596014 SPATC1LQ9H0A9 340 aa22.53■■□□□ 1.2
PNKP-207ENST00000596014 CPVLQ9H3G5 476 aa22.53■■□□□ 1.2
PNKP-207ENST00000596014 ZNF214Q9UL59 606 aaPredicted RBP22.53■■□□□ 1.2
PNKP-207ENST00000596014 ANP32AP39687 249 aaKnown RBP22.52■■□□□ 1.2
PNKP-207ENST00000596014 RBM25P49756 843 aaKnown RBP22.52■■□□□ 1.2
PNKP-207ENST00000596014 CCNA1P78396 465 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 PLS1Q14651 629 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 KLRF2D3W0D1 207 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 CALM1P0DP23 149 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 CALM2P0DP24 149 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 CALM3P0DP25 149 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 APOA5Q6Q788 366 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 SYNE3Q6ZMZ3 975 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 TRIM47Q96LD4 638 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 MOV10L1Q9BXT6 1211 aaKnown RBP22.52■■□□□ 1.2
PNKP-207ENST00000596014 PORCNQ9H237 461 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 PDRG1Q9NUG6 133 aa22.52■■□□□ 1.2
PNKP-207ENST00000596014 BAZ2BQ9UIF8 2168 aaKnown RBP22.52■■□□□ 1.2
PNKP-207ENST00000596014 CTDP1Q9Y5B0 961 aaPredicted RBP22.52■■□□□ 1.2
PNKP-207ENST00000596014 KLF18A0A0U1RQI7 1052 aa22.51■■□□□ 1.19
PNKP-207ENST00000596014 FMNL1O95466 1100 aaPredicted RBP22.51■■□□□ 1.19
PNKP-207ENST00000596014 RXRAP19793 462 aa22.51■■□□□ 1.19
PNKP-207ENST00000596014 STAT3P40763 770 aa22.51■■□□□ 1.19
PNKP-207ENST00000596014 FCGRTP55899 365 aa22.51■■□□□ 1.19
PNKP-207ENST00000596014 SNAP25P60880 206 aa22.51■■□□□ 1.19
PNKP-207ENST00000596014 APOBRQ0VD83 1088 aa22.51■■□□□ 1.19
PNKP-207ENST00000596014 ARHGEF6Q15052 776 aa22.51■■□□□ 1.19
PNKP-207ENST00000596014 RAB11FIP4Q86YS3 637 aa22.51■■□□□ 1.19
PNKP-207ENST00000596014 CPXCR1Q8N123 301 aa22.51■■□□□ 1.19
PNKP-207ENST00000596014 CTCFLQ8NI51 663 aaPredicted RBP22.51■■□□□ 1.19
PNKP-207ENST00000596014 ATP2A1O14983 1001 aa22.5■■□□□ 1.19
PNKP-207ENST00000596014 MICU3Q86XE3 530 aa22.5■■□□□ 1.19
PNKP-207ENST00000596014 RANBP17Q9H2T7 1088 aaKnown RBP22.5■■□□□ 1.19
PNKP-207ENST00000596014 EFCC1Q9HA90 598 aa22.5■■□□□ 1.19
PNKP-207ENST00000596014 RAVER2Q9HCJ3 691 aaKnown RBP22.5■■□□□ 1.19
PNKP-207ENST00000596014 ZBTB43O43298 467 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 MAPK4P31152 587 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 KIF5BP33176 963 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 OAZ1P54368 228 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 TOB2Q14106 344 aaPredicted RBP22.49■■□□□ 1.19
PNKP-207ENST00000596014 CCAR1Q8IX12 1150 aaKnown RBP22.49■■□□□ 1.19
PNKP-207ENST00000596014 CCDC144CPQ8IYA2 1237 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 ADGRF4Q8IZF3 695 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 FANCBQ8NB91 859 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 KIF2CQ99661 725 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 TEX13BQ9BXU2 312 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 SMCHD1A6NHR9 2005 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 ZNF536O15090 1300 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 TNPO2O14787 897 aaKnown RBP22.49■■□□□ 1.19
PNKP-207ENST00000596014 OTOP1Q7RTM1 612 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 RIOX2Q8IUF8 465 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 SHCBP1Q8NEM2 672 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 TRIM17Q9Y577 477 aa22.49■■□□□ 1.19
PNKP-207ENST00000596014 MYH6P13533 1939 aa22.48■■□□□ 1.19
PNKP-207ENST00000596014 GNRH1P01148 92 aa22.48■■□□□ 1.19
PNKP-207ENST00000596014 ERCC3P19447 782 aa22.48■■□□□ 1.19
PNKP-207ENST00000596014 EVCP57679 992 aa22.48■■□□□ 1.19
PNKP-207ENST00000596014 SNRNP48Q6IEG0 339 aaKnown RBP22.48■■□□□ 1.19
PNKP-207ENST00000596014 CCDC174Q6PII3 467 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms