RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 INPP5BP32019 993 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 MAP3K9P80192 1104 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 KLRC3Q07444 240 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 TRIM29Q14134 588 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 CCDC96Q2M329 555 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 ASPRV1Q53RT3 343 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 FOXD4L5Q5VV16 416 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 SCYL3Q8IZE3 742 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 STAG2Q8N3U4 1231 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 GMCL1P1Q8NEA9 526 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 DCAF4Q8WV16 495 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 FOXD4L4Q8WXT5 416 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 ZNF333Q96JL9 665 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 C8orf76Q96K31 380 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 ALG1Q9BT22 464 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 RNF26Q9BY78 433 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 GPCPD1Q9NPB8 672 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 ISY1Q9ULR0 285 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 TMX2Q9Y320 296 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 SNHG28P0DPA3 235 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 ZSCAN22P10073 491 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 SLC1A4P43007 532 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 IREB2P48200 963 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 FOSBP53539 338 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 PKP1Q13835 747 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 GPATCH4Q5T3I0 446 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 CD99L2Q8TCZ2 262 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 ACER1Q8TDN7 264 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 ZKSCAN4Q969J2 545 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 ERO1AQ96HE7 468 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 AS3MTQ9HBK9 375 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 GOPCQ9HD26 462 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 MTMR6Q9Y217 621 aa15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 GREB1LQ9C091 1923 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 FRMPD2Q68DX3 1309 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-209ENST00000595803 A0A1W2PRG0 241 aa15.1■□□□□ 0.01
SHKBP1-209ENST00000595803 ZNF543Q08ER8 600 aa15.1■□□□□ 0.01
SHKBP1-209ENST00000595803 FUT2Q10981 343 aa15.1■□□□□ 0.01
SHKBP1-209ENST00000595803 RGS22Q8NE09 1264 aa15.1■□□□□ 0.01
SHKBP1-209ENST00000595803 FEZ1Q99689 392 aa15.1■□□□□ 0.01
SHKBP1-209ENST00000595803 UBA5Q9GZZ9 404 aa15.1■□□□□ 0.01
SHKBP1-209ENST00000595803 VAT1LQ9HCJ6 419 aa15.1■□□□□ 0.01
SHKBP1-209ENST00000595803 FZD1Q9UP38 647 aa15.1■□□□□ 0.01
SHKBP1-209ENST00000595803 ZDHHC9Q9Y397 364 aa15.1■□□□□ 0.01
SHKBP1-209ENST00000595803 NDUFB10O96000 172 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 BMP3P12645 472 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 XBP1P17861 261 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 NOL9Q5SY16 702 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 ARMC9Q7Z3E5 817 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 IFNL1Q8IU54 200 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 PIBF1Q8WXW3 757 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 TNPO1Q92973 898 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 GMCL1Q96IK5 515 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 EFCC1Q9HA90 598 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 CSADQ9Y600 493 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 MYH4Q9Y623 1939 aa15.09■□□□□ 0.01
SHKBP1-209ENST00000595803 F13A1P00488 732 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 GUCY1B3Q02153 619 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 SPRYD7Q5W111 196 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 TTBK2Q6IQ55 1244 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 KCTD1Q719H9 257 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 CCDC84Q86UT8 332 aaPredicted RBP15.08■□□□□ 0
SHKBP1-209ENST00000595803 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.08■□□□□ 0
SHKBP1-209ENST00000595803 RRP36Q96EU6 259 aaKnown RBP15.08■□□□□ 0
SHKBP1-209ENST00000595803 WDR18Q9BV38 432 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 SPZ1Q9BXG8 430 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 PRO3102Q9H379 93 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 VCPKMTQ9H867 229 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.08■□□□□ 0
SHKBP1-209ENST00000595803 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.08■□□□□ 0
SHKBP1-209ENST00000595803 ATP6V1DQ9Y5K8 247 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 CNTNAP5Q8WYK1 1306 aa15.08■□□□□ 0
SHKBP1-209ENST00000595803 hCG_1642624A0A1W2PR95 340 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 USP17L10C9JJH3 530 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 PTPRAP18433 802 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 USP14P54578 494 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 CAP1Q01518 475 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 ZYXQ15942 572 aaKnown RBP15.07■□□□□ 0
SHKBP1-209ENST00000595803 PKN1Q16512 942 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 PFKFB3Q16875 520 aaPredicted RBP15.07■□□□□ 0
SHKBP1-209ENST00000595803 MCTP1Q6DN14 999 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 OTUD7BQ6GQQ9 843 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 RASGRP2Q7LDG7 609 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 FBXO18Q8NFZ0 1043 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 AIFM3Q96NN9 605 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 GBP4Q96PP9 640 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 RIOX1Q9H6W3 641 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 SEC63Q9UGP8 760 aaKnown RBP15.07■□□□□ 0
SHKBP1-209ENST00000595803 ZHX2Q9Y6X8 837 aa15.07■□□□□ 0
SHKBP1-209ENST00000595803 IGF2BP3O00425 579 aaKnown RBP eCLIP15.06■□□□□ 0
SHKBP1-209ENST00000595803 CYTH3O43739 400 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 SCG2P13521 617 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 SLC16A2P36021 539 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 SPP2Q13103 211 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 IKQ13123 557 aaPredicted RBP15.06■□□□□ 0
SHKBP1-209ENST00000595803 SAFBQ15424 915 aaKnown RBP eCLIP15.06■□□□□ 0
SHKBP1-209ENST00000595803 SLC9C1Q4G0N8 1177 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 KRT40Q6A162 431 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.06■□□□□ 0
SHKBP1-209ENST00000595803 ANKRD13AQ8IZ07 590 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms