RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 ZNF214Q9UL59 606 aaPredicted RBP13.12□□□□□ -0.31
XRCC1-204ENST00000594511 MGAMO43451 1857 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 TMEM132BQ14DG7 1078 aa13.11□□□□□ -0.31
XRCC1-204ENST00000594511 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
XRCC1-204ENST00000594511 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
XRCC1-204ENST00000594511 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
XRCC1-204ENST00000594511 ZNF654Q8IZM8 581 aa13.11□□□□□ -0.31
XRCC1-204ENST00000594511 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
XRCC1-204ENST00000594511 RANBP17Q9H2T7 1088 aaKnown RBP13.11□□□□□ -0.31
XRCC1-204ENST00000594511 PRR12Q9ULL5 1215 aa13.11□□□□□ -0.31
XRCC1-204ENST00000594511 COL11A1P12107 1806 aaPredicted RBP13.11□□□□□ -0.31
XRCC1-204ENST00000594511 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 NID2Q14112 1375 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 PARP1P09874 1014 aaKnown RBP13.1□□□□□ -0.31
XRCC1-204ENST00000594511 CPA1P15085 419 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
XRCC1-204ENST00000594511 ARHGEF6Q15052 776 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 SLC35G1Q2M3R5 365 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 APOA5Q6Q788 366 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 USP6NLQ92738 828 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 TRIM47Q96LD4 638 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 SPATC1LQ9H0A9 340 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 RIOX1Q9H6W3 641 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 GJD2Q9UKL4 321 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 CYP46A1Q9Y6A2 500 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 ZNF536O15090 1300 aa13.1□□□□□ -0.31
XRCC1-204ENST00000594511 PEX10O60683 326 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 SLC25A27O95847 323 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 CALM1P0DP23 149 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 CALM2P0DP24 149 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 CALM3P0DP25 149 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 MAPK4P31152 587 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 COPB2P35606 906 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 PSMC4P43686 418 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 PRMT2P55345 433 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 CCNA1P78396 465 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
XRCC1-204ENST00000594511 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 Q6ZUG5 572 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 STAG2Q8N3U4 1231 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 CD99L2Q8TCZ2 262 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
XRCC1-204ENST00000594511 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 ARHGAP39Q9C0H5 1083 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 MAF1Q9H063 256 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 PORCNQ9H237 461 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
XRCC1-204ENST00000594511 BRPF3Q9ULD4 1205 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 PLXNB2O15031 1838 aa13.09□□□□□ -0.31
XRCC1-204ENST00000594511 CCDC69A6NI79 296 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 KLRF2D3W0D1 207 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 RAD21O60216 631 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 ZBED4O75132 1171 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 IGHA2P01877 340 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 STAT3P40763 770 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 FUT2Q10981 343 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 KIF22Q14807 665 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 PPP2R5BQ15173 497 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 PKN2Q16513 984 aaKnown RBP13.08□□□□□ -0.32
XRCC1-204ENST00000594511 CCDC96Q2M329 555 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 MORN1Q5T089 497 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 CTU1Q7Z7A3 348 aaKnown RBP13.08□□□□□ -0.32
XRCC1-204ENST00000594511 ABRAQ8N0Z2 381 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 KIFC2Q96AC6 838 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 LZTS2Q9BRK4 669 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 TEX13BQ9BXU2 312 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 C22orf23Q9BZE7 217 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 MROH8Q9H579 483 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 PNMA2Q9UL42 364 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
XRCC1-204ENST00000594511 FRMPD2Q68DX3 1309 aaPredicted RBP13.08□□□□□ -0.32
XRCC1-204ENST00000594511 ZSWIM8A7E2V4 1837 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 CYTH3O43739 400 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 STRNO43815 780 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 ICAM1P05362 532 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 GOLGA8HP0CJ92 632 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 HOXD10P28358 340 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 SLC16A2P36021 539 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 GNAQP50148 359 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 FCGRTP55899 365 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 IRF5Q13568 498 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 TKFCQ3LXA3 575 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 NBPF11Q86T75 865 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 FANCBQ8NB91 859 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 ZNF274Q96GC6 653 aaPredicted RBP13.07□□□□□ -0.32
XRCC1-204ENST00000594511 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 SPZ1Q9BXG8 430 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 SRRDQ9UH36 339 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 RIPK3Q9Y572 518 aa13.07□□□□□ -0.32
XRCC1-204ENST00000594511 SMCHD1A6NHR9 2005 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 ZNF236Q9UL36 1845 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 SLC15A5A6NIM6 579 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms