RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 RAD21O60216 631 aa19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 AKR1A1P14550 325 aa19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 GNAT2P19087 354 aa19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 ITGB8P26012 769 aa19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 SNRNP48Q6IEG0 339 aaKnown RBP19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 RNF180Q86T96 592 aa19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 PRDM5Q9NQX1 630 aaPredicted RBP19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 MTMR4Q9NYA4 1195 aa19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 SYNPO2Q9UMS6 1093 aa19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 PARP14Q460N5 1801 aa19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 GREB1LQ9C091 1923 aaPredicted RBP19.01■□□□□ 0.63
GTF2F1-203ENST00000594213 SMCHD1A6NHR9 2005 aa19■□□□□ 0.63
GTF2F1-203ENST00000594213 PATL2C9JE40 543 aaKnown RBP19■□□□□ 0.63
GTF2F1-203ENST00000594213 CCSAPQ6IQ19 270 aaPredicted RBP19■□□□□ 0.63
GTF2F1-203ENST00000594213 KLHDC9Q8NEP7 349 aa19■□□□□ 0.63
GTF2F1-203ENST00000594213 LENG1Q96BZ8 264 aaPredicted RBP19■□□□□ 0.63
GTF2F1-203ENST00000594213 CEP95Q96GE4 821 aa19■□□□□ 0.63
GTF2F1-203ENST00000594213 GPATCH3Q96I76 525 aa19■□□□□ 0.63
GTF2F1-203ENST00000594213 FGD4Q96M96 766 aa19■□□□□ 0.63
GTF2F1-203ENST00000594213 TSEN34Q9BSV6 310 aaKnown RBP19■□□□□ 0.63
GTF2F1-203ENST00000594213 SLC38A10Q9HBR0 1119 aa19■□□□□ 0.63
GTF2F1-203ENST00000594213 TACC3Q9Y6A5 838 aa19■□□□□ 0.63
GTF2F1-203ENST00000594213 SYNGAP1Q96PV0 1343 aa19■□□□□ 0.63
GTF2F1-203ENST00000594213 A0A1W2PQ45 241 aaPredicted RBP18.99■□□□□ 0.63
GTF2F1-203ENST00000594213 A0A1W2PQY0 241 aa18.99■□□□□ 0.63
GTF2F1-203ENST00000594213 KIAA0355O15063 1070 aa18.99■□□□□ 0.63
GTF2F1-203ENST00000594213 PRDM1O75626 825 aa18.99■□□□□ 0.63
GTF2F1-203ENST00000594213 ZNF467Q7Z7K2 595 aaPredicted RBP18.99■□□□□ 0.63
GTF2F1-203ENST00000594213 IFNL3Q8IZI9 196 aa18.99■□□□□ 0.63
GTF2F1-203ENST00000594213 CNPY2Q9Y2B0 182 aa18.99■□□□□ 0.63
GTF2F1-203ENST00000594213 ZBED4O75132 1171 aa18.98■□□□□ 0.63
GTF2F1-203ENST00000594213 ZNF444Q8N0Y2 327 aaPredicted RBP18.98■□□□□ 0.63
GTF2F1-203ENST00000594213 GMCL1P1Q8NEA9 526 aa18.98■□□□□ 0.63
GTF2F1-203ENST00000594213 NEDD1Q8NHV4 660 aa18.98■□□□□ 0.63
GTF2F1-203ENST00000594213 PI4K2BQ8TCG2 481 aa18.98■□□□□ 0.63
GTF2F1-203ENST00000594213 DDX11Q96FC9 970 aa18.98■□□□□ 0.63
GTF2F1-203ENST00000594213 ZNF287Q9HBT7 754 aa18.98■□□□□ 0.63
GTF2F1-203ENST00000594213 FEM1BQ9UK73 627 aa18.98■□□□□ 0.63
GTF2F1-203ENST00000594213 FAM184BQ9ULE4 1060 aa18.98■□□□□ 0.63
GTF2F1-203ENST00000594213 LTBP2Q14767 1821 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 CLTBP09497 229 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 TDO2P48775 406 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 EPHB4P54760 987 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 SMAD3P84022 425 aaKnown RBP18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 ANKRD33Q7Z3H0 272 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 CPXCR1Q8N123 301 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 FAM161BQ96MY7 647 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 TOX2Q96NM4 488 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 SEC62Q99442 399 aaKnown RBP18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 SEMA6BQ9H3T3 888 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 RAVER2Q9HCJ3 691 aaKnown RBP18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 PCDHB15Q9Y5E8 787 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 ZNFX1Q9P2E3 1918 aaKnown RBP18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 TTC41PQ6P2S7 1318 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 SYNRGQ9UMZ2 1314 aa18.97■□□□□ 0.63
GTF2F1-203ENST00000594213 MYH8P13535 1937 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 PLIN4Q96Q06 1357 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 DUSP11O75319 330 aaKnown RBP18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 TTLL1O95922 423 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 APPP05067 770 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 ACLYP53396 1101 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 OAZ1P54368 228 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 ZMYM1Q5SVZ6 1142 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 ZNF697Q5TEC3 545 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 CHST13Q8NET6 341 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 OTUD7AQ8TE49 926 aaPredicted RBP18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 KIFC2Q96AC6 838 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 MYH7P12883 1935 aa18.96■□□□□ 0.63
GTF2F1-203ENST00000594213 COL11A1P12107 1806 aaPredicted RBP18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 MYADML2A6NDP7 307 aa18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 MOXD2PA6NHM9 499 aa18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 FOXP2O15409 715 aa18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 ADCY6O43306 1168 aa18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 CST5P28325 142 aaPredicted RBP18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 FAAP100Q0VG06 881 aa18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 ACVR2BQ13705 512 aa18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 KCNA10Q16322 511 aa18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 LRRFIP1Q32MZ4 808 aaKnown RBP18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 LRRC47Q8N1G4 583 aaKnown RBP18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 CDX2Q99626 313 aaPredicted RBP18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 KATNBL1Q9H079 304 aa18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 FBXO40Q9UH90 709 aa18.95■□□□□ 0.62
GTF2F1-203ENST00000594213 EYSQ5T1H1 3165 aa18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 PQBP1O60828 265 aaKnown RBP18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 BMP3P12645 472 aa18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 CDK7P50613 346 aa18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 IRX5P78411 483 aaPredicted RBP18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 SLFN13Q68D06 897 aa18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 UPF3AQ9H1J1 476 aaKnown RBP18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 TTYH1Q9H313 450 aaPredicted RBP18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 ZHX1Q9UKY1 873 aaPredicted RBP18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 PRUNE2Q8WUY3 3088 aa18.94■□□□□ 0.62
GTF2F1-203ENST00000594213 CDH23Q9H251 3354 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 FDX1P10109 184 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 NKX3-2P78367 333 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 TFAP4Q01664 338 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 ANKRD35Q8N283 1001 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 NUP133Q8WUM0 1156 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms