RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 HYAL1Q12794 435 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 CNGB1Q14028 1251 aaPredicted RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 DIXDC1Q155Q3 683 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 CTC1Q2NKJ3 1217 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 TIGD5Q53EQ6 642 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 CWF19L1Q69YN2 538 aaKnown RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 FAM117BQ6P1L5 589 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 UNQ6494/PRO21346Q6UXR6 183 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 ZBTB33Q86T24 672 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 ZSCAN29Q8IWY8 852 aaPredicted RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 PHOSPHO2Q8TCD6 241 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 CDCA7LQ96GN5 454 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 FAM84BQ96KN1 310 aaPredicted RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 BBC3Q96PG8 261 aaPredicted RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 IGFLR1Q9H665 355 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 INCENPQ9NQS7 918 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 CWC25Q9NXE8 425 aaPredicted RBP3.96□□□□□ -1.78
VRK3-204ENST00000593912 CD207Q9UJ71 328 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 KALRNO60229 2985 aa3.96□□□□□ -1.78
VRK3-204ENST00000593912 MAST3O60307 1309 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 ELP1O95163 1332 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 KIF16BQ96L93 1317 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 MYH13Q9UKX3 1938 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 COL12A1Q99715 3063 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 USP17L5A8MUK1 530 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 BRD1O95696 1058 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 C6orf222P0C671 652 aaPredicted RBP3.95□□□□□ -1.78
VRK3-204ENST00000593912 ZNF865P0CJ78 1059 aaPredicted RBP3.95□□□□□ -1.78
VRK3-204ENST00000593912 CYP2C9P11712 490 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 SDHBP21912 280 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 HIBADHP31937 336 aaKnown RBP3.95□□□□□ -1.78
VRK3-204ENST00000593912 ICAM3P32942 547 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 RRP1P56182 461 aaKnown RBP3.95□□□□□ -1.78
VRK3-204ENST00000593912 BACE1P56817 501 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 CCNA1P78396 465 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 JAG1P78504 1218 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 MAP3K10Q02779 954 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 CCDC105Q8IYK2 499 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 SUMF1Q8NBK3 374 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 CCDC191Q8NCU4 936 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 FLCNQ8NFG4 579 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 MAML3Q96JK9 1138 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 ZBED2Q9BTP6 218 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 SEMA4AQ9H3S1 761 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 NSUN3Q9H649 340 aaKnown RBP3.95□□□□□ -1.78
VRK3-204ENST00000593912 DDX4Q9NQI0 724 aaKnown RBP3.95□□□□□ -1.78
VRK3-204ENST00000593912 USP40Q9NVE5 1235 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 TMOD4Q9NZQ9 345 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 NCDNQ9UBB6 729 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 RABGAP1Q9Y3P9 1069 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 TICRRQ7Z2Z1 1910 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 CNOT1A5YKK6 2376 aaKnown RBP3.95□□□□□ -1.78
VRK3-204ENST00000593912 GRIN2DO15399 1336 aa3.95□□□□□ -1.78
VRK3-204ENST00000593912 DOPEY1Q5JWR5 2465 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 ROBO3Q96MS0 1386 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 MYH2Q9UKX2 1941 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 SIPA1L1O43166 1804 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 ACTN1P12814 892 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 AKR1A1P14550 325 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 KCNJ6P48051 423 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 WDR5P61964 334 aaKnown RBP3.94□□□□□ -1.78
VRK3-204ENST00000593912 SHC2P98077 582 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 BEX3Q00994 111 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 GPM6BQ13491 265 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 PICALMQ13492 652 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 ZYXQ15942 572 aaKnown RBP3.94□□□□□ -1.78
VRK3-204ENST00000593912 CCDC6Q16204 474 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 PTPROQ16827 1216 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 TCTN1Q2MV58 587 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 N4BP2L1Q5TBK1 243 aaPredicted RBP3.94□□□□□ -1.78
VRK3-204ENST00000593912 HDGFL1Q5TGJ6 251 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 HHIPL2Q6UWX4 724 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 DTWD2Q8NBA8 298 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 KREMEN2Q8NCW0 462 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 MSLNLQ96KJ4 702 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 CRBNQ96SW2 442 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 MOV10L1Q9BXT6 1211 aaKnown RBP3.94□□□□□ -1.78
VRK3-204ENST00000593912 FTOQ9C0B1 505 aaKnown RBP eCLIP3.94□□□□□ -1.78
VRK3-204ENST00000593912 MFSD1Q9H3U5 465 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 PHAXQ9H814 394 aaKnown RBP3.94□□□□□ -1.78
VRK3-204ENST00000593912 PARD6AQ9NPB6 346 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 USP18Q9UMW8 372 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 KNSTRNQ9Y448 316 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 USP15Q9Y4E8 981 aaPredicted RBP3.94□□□□□ -1.78
VRK3-204ENST00000593912 MCM3APO60318 1980 aa3.94□□□□□ -1.78
VRK3-204ENST00000593912 TRIP12Q14669 1992 aaPredicted RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 CFAP46Q8IYW2 2715 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 A0A1B0GUL7 405 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 PRR5-ARHGAP8B1AHC4 643 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 FRAT2O75474 233 aaPredicted RBP3.93□□□□□ -1.78
VRK3-204ENST00000593912 GJB5O95377 273 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 EYA4O95677 639 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 PRB1P04280 392 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 IGKV5-2P06315 115 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 PFKMP08237 780 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 ERCC3P19447 782 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 SPINK2P20155 84 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 TGM1P22735 817 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 PTGS1P23219 599 aa3.93□□□□□ -1.78
VRK3-204ENST00000593912 CAP2P40123 477 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms