RNA–Protein interactions for RNA: ENST00000593699.5

LRMDA-209, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 1 (best)

Gene LRMDA, Length 1,124 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-209ENST00000593699 FBXO40Q9UH90 709 aa12.97□□□□□ -0.33
LRMDA-209ENST00000593699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
LRMDA-209ENST00000593699 KBTBD13C9JR72 458 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 ORC4O43929 436 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 SLC1A4P43007 532 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 OAZ1P54368 228 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 VPS53Q5VIR6 699 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 C7orf61Q8IZ16 206 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 CHURC1Q8WUH1 139 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 GMCL1Q96IK5 515 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 MAML3Q96JK9 1138 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.33
LRMDA-209ENST00000593699 NRBP1Q9UHY1 535 aa12.96□□□□□ -0.33
LRMDA-209ENST00000593699 ATP2A1O14983 1001 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 FOXP2O15409 715 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 SEPT4O43236 478 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 NEFLP07196 543 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 NT5C2P49902 561 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 RRP12Q5JTH9 1297 aaKnown RBP12.95□□□□□ -0.34
LRMDA-209ENST00000593699 PLEKHM2Q8IWE5 1019 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 REPS2Q8NFH8 660 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 DDX11Q96FC9 970 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 COLQQ9Y215 455 aaPredicted RBP12.95□□□□□ -0.34
LRMDA-209ENST00000593699 CNPY2Q9Y2B0 182 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 DIS3Q9Y2L1 958 aaKnown RBP12.95□□□□□ -0.34
LRMDA-209ENST00000593699 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
LRMDA-209ENST00000593699 ALPK3Q96L96 1907 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 TMEM232C9JQI7 657 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 DNM1LO00429 736 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 COBLO75128 1261 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 IGHDP01880 384 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 HSPD1P10809 573 aaKnown RBP12.94□□□□□ -0.34
LRMDA-209ENST00000593699 SDSP20132 328 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 SLC4A3P48751 1232 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 CCDC96Q2M329 555 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 LHX8Q68G74 356 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 ZNF589Q86UQ0 364 aaPredicted RBP12.94□□□□□ -0.34
LRMDA-209ENST00000593699 CPXCR1Q8N123 301 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
LRMDA-209ENST00000593699 ARRDC4Q8NCT1 418 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 CHST13Q8NET6 341 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 SLC38A10Q9HBR0 1119 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 CEP290O15078 2479 aa12.94□□□□□ -0.34
LRMDA-209ENST00000593699 PFASO15067 1338 aa12.93□□□□□ -0.34
LRMDA-209ENST00000593699 A0A1W2PPC1 479 aa12.93□□□□□ -0.34
LRMDA-209ENST00000593699 FGAP02671 866 aa12.93□□□□□ -0.34
LRMDA-209ENST00000593699 PGK2P07205 417 aa12.93□□□□□ -0.34
LRMDA-209ENST00000593699 COL6A1P12109 1028 aa12.93□□□□□ -0.34
LRMDA-209ENST00000593699 MFSD6Q6ZSS7 791 aa12.93□□□□□ -0.34
LRMDA-209ENST00000593699 ANKRD35Q8N283 1001 aa12.93□□□□□ -0.34
LRMDA-209ENST00000593699 DCAF4Q8WV16 495 aa12.93□□□□□ -0.34
LRMDA-209ENST00000593699 TINF2Q9BSI4 451 aa12.93□□□□□ -0.34
LRMDA-209ENST00000593699 PLA2G6O60733 806 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
LRMDA-209ENST00000593699 RARBP10826 455 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
LRMDA-209ENST00000593699 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
LRMDA-209ENST00000593699 HAND2P61296 217 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 ZNF792Q3KQV3 632 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 TKFCQ3LXA3 575 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 CWC27Q6UX04 472 aaKnown RBP12.92□□□□□ -0.34
LRMDA-209ENST00000593699 TRPV1Q8NER1 839 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 ESR2Q92731 530 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 ACAD9Q9H845 621 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 RAVER2Q9HCJ3 691 aaKnown RBP12.92□□□□□ -0.34
LRMDA-209ENST00000593699 MTMR7Q9Y216 660 aa12.92□□□□□ -0.34
LRMDA-209ENST00000593699 RAD50Q92878 1312 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 SYNGAP1Q96PV0 1343 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 ZNF213O14771 459 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 NMT2O60551 498 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 IGHA2P01877 340 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 FGRP09769 529 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 AKR1A1P14550 325 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 MCCP23508 829 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.91□□□□□ -0.34
LRMDA-209ENST00000593699 ZNF467Q7Z7K2 595 aaPredicted RBP12.91□□□□□ -0.34
LRMDA-209ENST00000593699 XPNPEP3Q9NQH7 507 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 HOMER2Q9NSB8 354 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 CTNNA3Q9UI47 895 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 PNMA2Q9UL42 364 aa12.91□□□□□ -0.34
LRMDA-209ENST00000593699 IMMTQ16891 758 aaKnown RBP12.9□□□□□ -0.34
LRMDA-209ENST00000593699 KCTD1Q719H9 257 aa12.9□□□□□ -0.34
LRMDA-209ENST00000593699 RNF180Q86T96 592 aa12.9□□□□□ -0.34
LRMDA-209ENST00000593699 IQCA1Q86XH1 822 aa12.9□□□□□ -0.34
LRMDA-209ENST00000593699 DSCC1Q9BVC3 393 aa12.9□□□□□ -0.34
LRMDA-209ENST00000593699 SENP6Q9GZR1 1112 aaPredicted RBP12.9□□□□□ -0.34
LRMDA-209ENST00000593699 IL17RBQ9NRM6 502 aa12.9□□□□□ -0.34
LRMDA-209ENST00000593699 RNF146Q9NTX7 359 aa12.9□□□□□ -0.34
LRMDA-209ENST00000593699 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
LRMDA-209ENST00000593699 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
LRMDA-209ENST00000593699 PRKAG2Q9UGJ0 569 aa12.9□□□□□ -0.34
LRMDA-209ENST00000593699 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
LRMDA-209ENST00000593699 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.35
LRMDA-209ENST00000593699 DNAJC25-GNG10A0A024R161 153 aa12.89□□□□□ -0.35
LRMDA-209ENST00000593699 ALAS1P13196 640 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms