RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SNHG28P0DPA3 235 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 EEF2P13639 858 aaKnown RBP15.59■□□□□ 0.09
VMP1-217ENST00000593168 CAP2P40123 477 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 JAG1P78504 1218 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 AKAP17AQ02040 695 aaKnown RBP15.59■□□□□ 0.09
VMP1-217ENST00000593168 DCAF15Q66K64 600 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 SIAH1Q8IUQ4 282 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 SRBD1Q8N5C6 995 aaKnown RBP15.59■□□□□ 0.09
VMP1-217ENST00000593168 FBXO18Q8NFZ0 1043 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 BRI3BPQ8WY22 251 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 ZNF333Q96JL9 665 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 C8orf76Q96K31 380 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 ALG1Q9BT22 464 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 PTCH2Q9Y6C5 1203 aa15.59■□□□□ 0.09
VMP1-217ENST00000593168 PDHBP11177 359 aa15.58■□□□□ 0.08
VMP1-217ENST00000593168 MCM4P33991 863 aa15.58■□□□□ 0.08
VMP1-217ENST00000593168 ICA1Q05084 483 aa15.58■□□□□ 0.08
VMP1-217ENST00000593168 ASPRV1Q53RT3 343 aa15.58■□□□□ 0.08
VMP1-217ENST00000593168 FOXD4L5Q5VV16 416 aaPredicted RBP15.58■□□□□ 0.08
VMP1-217ENST00000593168 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.58■□□□□ 0.08
VMP1-217ENST00000593168 CLEC10AQ8IUN9 316 aa15.58■□□□□ 0.08
VMP1-217ENST00000593168 CMTR1Q8N1G2 835 aaKnown RBP15.58■□□□□ 0.08
VMP1-217ENST00000593168 CCDC82Q8N4S0 544 aa15.58■□□□□ 0.08
VMP1-217ENST00000593168 FOXD4L4Q8WXT5 416 aaPredicted RBP15.58■□□□□ 0.08
VMP1-217ENST00000593168 ZSCAN16Q9H4T2 348 aaPredicted RBP15.58■□□□□ 0.08
VMP1-217ENST00000593168 ZBTB21Q9ULJ3 1066 aa15.58■□□□□ 0.08
VMP1-217ENST00000593168 CNTNAP5Q8WYK1 1306 aa15.58■□□□□ 0.08
VMP1-217ENST00000593168 ASNSP08243 561 aa15.57■□□□□ 0.08
VMP1-217ENST00000593168 ATP2B2Q01814 1243 aa15.57■□□□□ 0.08
VMP1-217ENST00000593168 SHROOM1Q2M3G4 852 aaPredicted RBP15.57■□□□□ 0.08
VMP1-217ENST00000593168 LRRC47Q8N1G4 583 aaKnown RBP15.57■□□□□ 0.08
VMP1-217ENST00000593168 STAG2Q8N3U4 1231 aa15.57■□□□□ 0.08
VMP1-217ENST00000593168 TMEM106CQ9BVX2 250 aa15.57■□□□□ 0.08
VMP1-217ENST00000593168 ZNF341Q9BYN7 854 aa15.57■□□□□ 0.08
VMP1-217ENST00000593168 COLQQ9Y215 455 aaPredicted RBP15.57■□□□□ 0.08
VMP1-217ENST00000593168 V9GY48 417 aaPredicted RBP15.57■□□□□ 0.08
VMP1-217ENST00000593168 MYH4Q9Y623 1939 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 CCL15-CCL14A0A0B4J2E2 113 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 USP17L5A8MUK1 530 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 KLRF2D3W0D1 207 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 CTNND1O60716 968 aaKnown RBP15.56■□□□□ 0.08
VMP1-217ENST00000593168 ZNF543Q08ER8 600 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 VGLL4Q14135 290 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 TAF1CQ15572 869 aaPredicted RBP15.56■□□□□ 0.08
VMP1-217ENST00000593168 PKN1Q16512 942 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 CCL15Q16663 113 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 GPATCH4Q5T3I0 446 aaKnown RBP15.56■□□□□ 0.08
VMP1-217ENST00000593168 USP17L2Q6R6M4 530 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 FAM43AQ8N2R8 423 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 GMCL1P1Q8NEA9 526 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 DCAF4Q8WV16 495 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 SPZ1Q9BXG8 430 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 ARHGEF10LQ9HCE6 1279 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 ZNF112Q9UJU3 913 aa15.56■□□□□ 0.08
VMP1-217ENST00000593168 XBP1P17861 261 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 RESTQ13127 1097 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 TRIM29Q14134 588 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 SLC9C1Q4G0N8 1177 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 SLFN13Q68D06 897 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 KRT40Q6A162 431 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 AIFM3Q96NN9 605 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 ZFYVE28Q9HCC9 887 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 MTMR7Q9Y216 660 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 TMX2Q9Y320 296 aa15.55■□□□□ 0.08
VMP1-217ENST00000593168 DDX11L8A8MPP1 907 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 F5H6K3 240 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 GOLGA6L22H0YM25 854 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 CYTH3O43739 400 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 MYCP01106 439 aaPredicted RBP15.54■□□□□ 0.08
VMP1-217ENST00000593168 GOLGA8HP0CJ92 632 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 GTF2A2P52657 109 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 GUCY1B3Q02153 619 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 KLRC3Q07444 240 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 PFKFB3Q16875 520 aaPredicted RBP15.54■□□□□ 0.08
VMP1-217ENST00000593168 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.54■□□□□ 0.08
VMP1-217ENST00000593168 OTUD5Q96G74 571 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 ARHGAP39Q9C0H5 1083 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 RIOX1Q9H6W3 641 aa15.54■□□□□ 0.08
VMP1-217ENST00000593168 MYH6P13533 1939 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 A0A1W2PRG0 241 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 SCG2P13521 617 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 PTMSP20962 102 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 FOSBP53539 338 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 SLC35G1Q2M3R5 365 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 FAM177A1Q8N128 213 aaPredicted RBP15.53■□□□□ 0.08
VMP1-217ENST00000593168 SH3TC2Q8TF17 1288 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 GMCL1Q96IK5 515 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 SH2D4AQ9H788 454 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 GJB4Q9NTQ9 266 aa15.53■□□□□ 0.08
VMP1-217ENST00000593168 NDUFB10O96000 172 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 SLC1A4P43007 532 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 ARHGEF6Q15052 776 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 MCTP1Q6DN14 999 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 RASGRP2Q7LDG7 609 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 BRAPQ7Z569 592 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 ACER1Q8TDN7 264 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 GOPCQ9HD26 462 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 SH3GLB2Q9NR46 395 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms