RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 MTMR4Q9NYA4 1195 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 RIPK3Q9Y572 518 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 CTDP1Q9Y5B0 961 aaPredicted RBP24.39■■□□□ 1.49
TRIM47-207ENST00000593089 LTBP2Q14767 1821 aa24.39■■□□□ 1.49
TRIM47-207ENST00000593089 DNAH12Q6ZR08 3092 aa24.38■■□□□ 1.49
TRIM47-207ENST00000593089 ZBED4O75132 1171 aa24.38■■□□□ 1.49
TRIM47-207ENST00000593089 TTLL1O95922 423 aa24.38■■□□□ 1.49
TRIM47-207ENST00000593089 TSPY3P0CV98 308 aa24.38■■□□□ 1.49
TRIM47-207ENST00000593089 TSPY8P0CW00 308 aa24.38■■□□□ 1.49
TRIM47-207ENST00000593089 TRIM60Q495X7 471 aa24.38■■□□□ 1.49
TRIM47-207ENST00000593089 ZMYM1Q5SVZ6 1142 aa24.38■■□□□ 1.49
TRIM47-207ENST00000593089 MKL1Q969V6 931 aa24.38■■□□□ 1.49
TRIM47-207ENST00000593089 PRDM5Q9NQX1 630 aaPredicted RBP24.38■■□□□ 1.49
TRIM47-207ENST00000593089 RRP1P56182 461 aaKnown RBP24.37■■□□□ 1.49
TRIM47-207ENST00000593089 PDE4BQ07343 736 aa24.37■■□□□ 1.49
TRIM47-207ENST00000593089 PPARAQ07869 468 aa24.37■■□□□ 1.49
TRIM47-207ENST00000593089 DDX11Q96FC9 970 aa24.37■■□□□ 1.49
TRIM47-207ENST00000593089 RAVER2Q9HCJ3 691 aaKnown RBP24.37■■□□□ 1.49
TRIM47-207ENST00000593089 PGK1P00558 417 aa24.36■■□□□ 1.49
TRIM47-207ENST00000593089 SLC3A2P08195 630 aaKnown RBP24.36■■□□□ 1.49
TRIM47-207ENST00000593089 ZNF865P0CJ78 1059 aaPredicted RBP24.36■■□□□ 1.49
TRIM47-207ENST00000593089 NEDD1Q8NHV4 660 aa24.36■■□□□ 1.49
TRIM47-207ENST00000593089 FEM1BQ9UK73 627 aa24.36■■□□□ 1.49
TRIM47-207ENST00000593089 ISY1Q9ULR0 285 aaKnown RBP24.36■■□□□ 1.49
TRIM47-207ENST00000593089 CNPY2Q9Y2B0 182 aa24.36■■□□□ 1.49
TRIM47-207ENST00000593089 PLIN4Q96Q06 1357 aa24.35■■□□□ 1.49
TRIM47-207ENST00000593089 AKR1A1P14550 325 aa24.35■■□□□ 1.49
TRIM47-207ENST00000593089 TFAP4Q01664 338 aa24.35■■□□□ 1.49
TRIM47-207ENST00000593089 SNX17Q15036 470 aa24.35■■□□□ 1.49
TRIM47-207ENST00000593089 SLFN13Q68D06 897 aa24.35■■□□□ 1.49
TRIM47-207ENST00000593089 CCDC129Q6ZRS4 1044 aa24.35■■□□□ 1.49
TRIM47-207ENST00000593089 RNF180Q86T96 592 aa24.35■■□□□ 1.49
TRIM47-207ENST00000593089 GMCL1P1Q8NEA9 526 aa24.35■■□□□ 1.49
TRIM47-207ENST00000593089 LENG1Q96BZ8 264 aaPredicted RBP24.35■■□□□ 1.49
TRIM47-207ENST00000593089 ZBTB47Q9UFB7 747 aaPredicted RBP24.35■■□□□ 1.49
TRIM47-207ENST00000593089 ATP2A1O14983 1001 aa24.34■■□□□ 1.49
TRIM47-207ENST00000593089 SLC38A10Q9HBR0 1119 aa24.34■■□□□ 1.49
TRIM47-207ENST00000593089 SYNPO2Q9UMS6 1093 aa24.34■■□□□ 1.49
TRIM47-207ENST00000593089 PHF24Q9UPV7 400 aa24.34■■□□□ 1.49
TRIM47-207ENST00000593089 SALL3Q9BXA9 1300 aa24.34■■□□□ 1.49
TRIM47-207ENST00000593089 BMP3P12645 472 aa24.33■■□□□ 1.49
TRIM47-207ENST00000593089 ANKRD45Q5TZF3 282 aa24.33■■□□□ 1.49
TRIM47-207ENST00000593089 CHMP4CQ96CF2 233 aa24.33■■□□□ 1.49
TRIM47-207ENST00000593089 CRBNQ96SW2 442 aa24.33■■□□□ 1.49
TRIM47-207ENST00000593089 DNAJC25-GNG10A0A024R161 153 aa24.32■■□□□ 1.48
TRIM47-207ENST00000593089 SNAI1O95863 264 aaPredicted RBP24.32■■□□□ 1.48
TRIM47-207ENST00000593089 CTDSPL2Q05D32 466 aa24.32■■□□□ 1.48
TRIM47-207ENST00000593089 ANKRD35Q8N283 1001 aa24.32■■□□□ 1.48
TRIM47-207ENST00000593089 MSL3Q8N5Y2 521 aaKnown RBP24.32■■□□□ 1.48
TRIM47-207ENST00000593089 SLC17A8Q8NDX2 589 aa24.32■■□□□ 1.48
TRIM47-207ENST00000593089 PDLIM7Q9NR12 457 aa24.32■■□□□ 1.48
TRIM47-207ENST00000593089 ZHX1Q9UKY1 873 aaPredicted RBP24.32■■□□□ 1.48
TRIM47-207ENST00000593089 SYNGAP1Q96PV0 1343 aa24.32■■□□□ 1.48
TRIM47-207ENST00000593089 TMEM232C9JQI7 657 aa24.31■■□□□ 1.48
TRIM47-207ENST00000593089 FOXP2O15409 715 aa24.31■■□□□ 1.48
TRIM47-207ENST00000593089 C1orf53Q5VUE5 145 aa24.31■■□□□ 1.48
TRIM47-207ENST00000593089 SH3RF1Q7Z6J0 888 aa24.31■■□□□ 1.48
TRIM47-207ENST00000593089 BADQ92934 168 aa24.31■■□□□ 1.48
TRIM47-207ENST00000593089 ADAMTS4O75173 837 aa24.3■■□□□ 1.48
TRIM47-207ENST00000593089 TLE2Q04725 743 aa24.3■■□□□ 1.48
TRIM47-207ENST00000593089 IKQ13123 557 aaPredicted RBP24.3■■□□□ 1.48
TRIM47-207ENST00000593089 MAMDC4Q6UXC1 1216 aa24.3■■□□□ 1.48
TRIM47-207ENST00000593089 CHST13Q8NET6 341 aa24.3■■□□□ 1.48
TRIM47-207ENST00000593089 INCENPQ9NQS7 918 aa24.3■■□□□ 1.48
TRIM47-207ENST00000593089 HOMER2Q9NSB8 354 aa24.3■■□□□ 1.48
TRIM47-207ENST00000593089 MTMR10Q9NXD2 777 aa24.3■■□□□ 1.48
TRIM47-207ENST00000593089 FBXO40Q9UH90 709 aa24.3■■□□□ 1.48
TRIM47-207ENST00000593089 FAM184BQ9ULE4 1060 aa24.3■■□□□ 1.48
TRIM47-207ENST00000593089 MCM3APO60318 1980 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 A0A1W2PQ45 241 aaPredicted RBP24.29■■□□□ 1.48
TRIM47-207ENST00000593089 A0A1W2PQY0 241 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 TRIM43BA6NCK2 446 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 TSPY2A6NKD2 308 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 STAT2P52630 851 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 OAZ1P54368 228 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 VPS53Q5VIR6 699 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 ZNF467Q7Z7K2 595 aaPredicted RBP24.29■■□□□ 1.48
TRIM47-207ENST00000593089 TRIM43Q96BQ3 446 aaPredicted RBP24.29■■□□□ 1.48
TRIM47-207ENST00000593089 EVI5LQ96CN4 794 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 STX8Q9UNK0 236 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.29■■□□□ 1.48
TRIM47-207ENST00000593089 SYNRGQ9UMZ2 1314 aa24.29■■□□□ 1.48
TRIM47-207ENST00000593089 MCCP23508 829 aa24.28■■□□□ 1.48
TRIM47-207ENST00000593089 SLC1A4P43007 532 aa24.28■■□□□ 1.48
TRIM47-207ENST00000593089 SHHQ15465 462 aa24.28■■□□□ 1.48
TRIM47-207ENST00000593089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.28■■□□□ 1.48
TRIM47-207ENST00000593089 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.28■■□□□ 1.48
TRIM47-207ENST00000593089 NMT2O60551 498 aa24.27■■□□□ 1.48
TRIM47-207ENST00000593089 ACVR2BQ13705 512 aa24.27■■□□□ 1.48
TRIM47-207ENST00000593089 C9orf50Q5SZB4 431 aa24.27■■□□□ 1.48
TRIM47-207ENST00000593089 FAM160B2Q86V87 743 aa24.27■■□□□ 1.48
TRIM47-207ENST00000593089 CHURC1Q8WUH1 139 aa24.27■■□□□ 1.48
TRIM47-207ENST00000593089 STAG1Q8WVM7 1258 aa24.27■■□□□ 1.48
TRIM47-207ENST00000593089 GMCL1Q96IK5 515 aa24.27■■□□□ 1.48
TRIM47-207ENST00000593089 FGD4Q96M96 766 aa24.27■■□□□ 1.48
TRIM47-207ENST00000593089 PQBP1O60828 265 aaKnown RBP24.26■■□□□ 1.47
TRIM47-207ENST00000593089 CLTBP09497 229 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 FDX1P10109 184 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 ACLYP53396 1101 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 PDE1AP54750 535 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms