RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 FBXO40Q9UH90 709 aa15.78■□□□□ 0.12
APOC1-209ENST00000592885 CTDP1Q9Y5B0 961 aaPredicted RBP15.78■□□□□ 0.12
APOC1-209ENST00000592885 SYNGAP1Q96PV0 1343 aa15.77■□□□□ 0.12
APOC1-209ENST00000592885 PGK2P07205 417 aa15.77■□□□□ 0.12
APOC1-209ENST00000592885 RARBP10826 455 aa15.77■□□□□ 0.12
APOC1-209ENST00000592885 SNX17Q15036 470 aa15.77■□□□□ 0.12
APOC1-209ENST00000592885 LRIT3Q3SXY7 679 aa15.77■□□□□ 0.12
APOC1-209ENST00000592885 ZNF467Q7Z7K2 595 aaPredicted RBP15.77■□□□□ 0.12
APOC1-209ENST00000592885 SLC38A10Q9HBR0 1119 aa15.77■□□□□ 0.12
APOC1-209ENST00000592885 HELLSQ9NRZ9 838 aa15.77■□□□□ 0.12
APOC1-209ENST00000592885 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
APOC1-209ENST00000592885 ZMYM6O95789 1325 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 BMP3P12645 472 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 AKR1A1P14550 325 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 PDE1AP54750 535 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 TFAP4Q01664 338 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 GJC2Q5T442 439 aaPredicted RBP15.76■□□□□ 0.11
APOC1-209ENST00000592885 C1orf53Q5VUE5 145 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 FAM160B2Q86V87 743 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 LRRC47Q8N1G4 583 aaKnown RBP15.76■□□□□ 0.11
APOC1-209ENST00000592885 CHST13Q8NET6 341 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 KIFC2Q96AC6 838 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 GMCL1Q96IK5 515 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 UBE2OQ9C0C9 1292 aaKnown RBP15.76■□□□□ 0.11
APOC1-209ENST00000592885 PRKAG2Q9UGJ0 569 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 ANAPC4Q9UJX5 808 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 CNPY2Q9Y2B0 182 aa15.76■□□□□ 0.11
APOC1-209ENST00000592885 DNAJC25-GNG10A0A024R161 153 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 SOX1O00570 391 aaPredicted RBP15.75■□□□□ 0.11
APOC1-209ENST00000592885 FOXP2O15409 715 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 PLA2G6O60733 806 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 STAT2P52630 851 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 RTP1P59025 263 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 LRRC41Q15345 812 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 ALX1Q15699 326 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 FAM47AQ5JRC9 791 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 PRAMEF19Q5SWL8 479 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 SLFN13Q68D06 897 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 MAMDC4Q6UXC1 1216 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 RNF180Q86T96 592 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 DDX11Q96FC9 970 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 XPNPEP3Q9NQH7 507 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 PHF24Q9UPV7 400 aa15.75■□□□□ 0.11
APOC1-209ENST00000592885 TSPY2A6NKD2 308 aa15.74■□□□□ 0.11
APOC1-209ENST00000592885 ORC4O43929 436 aa15.74■□□□□ 0.11
APOC1-209ENST00000592885 ZNF865P0CJ78 1059 aaPredicted RBP15.74■□□□□ 0.11
APOC1-209ENST00000592885 ATN1P54259 1190 aaPredicted RBP15.74■□□□□ 0.11
APOC1-209ENST00000592885 ANO1Q5XXA6 986 aa15.74■□□□□ 0.11
APOC1-209ENST00000592885 SLC39A5Q6ZMH5 540 aa15.74■□□□□ 0.11
APOC1-209ENST00000592885 CCDC129Q6ZRS4 1044 aa15.74■□□□□ 0.11
APOC1-209ENST00000592885 CHURC1Q8WUH1 139 aa15.74■□□□□ 0.11
APOC1-209ENST00000592885 LBHD1Q9BQE6 289 aaPredicted RBP15.74■□□□□ 0.11
APOC1-209ENST00000592885 RIPK3Q9Y572 518 aa15.74■□□□□ 0.11
APOC1-209ENST00000592885 SZT2Q5T011 3432 aa15.74■□□□□ 0.11
APOC1-209ENST00000592885 FGRP09769 529 aa15.73■□□□□ 0.11
APOC1-209ENST00000592885 SLC1A4P43007 532 aa15.73■□□□□ 0.11
APOC1-209ENST00000592885 TKFCQ3LXA3 575 aa15.73■□□□□ 0.11
APOC1-209ENST00000592885 CPXCR1Q8N123 301 aa15.73■□□□□ 0.11
APOC1-209ENST00000592885 LRCH3Q96II8 777 aa15.73■□□□□ 0.11
APOC1-209ENST00000592885 RAVER2Q9HCJ3 691 aaKnown RBP15.73■□□□□ 0.11
APOC1-209ENST00000592885 SMCHD1A6NHR9 2005 aa15.73■□□□□ 0.11
APOC1-209ENST00000592885 TMEM232C9JQI7 657 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 NOVP48745 357 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 MDM2Q00987 491 aaPredicted RBP15.72■□□□□ 0.11
APOC1-209ENST00000592885 MCMDC2Q4G0Z9 681 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 ANKRD35Q8N283 1001 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 STAG1Q8WVM7 1258 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 TSEN34Q9BSV6 310 aaKnown RBP15.72■□□□□ 0.11
APOC1-209ENST00000592885 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
APOC1-209ENST00000592885 ACAD9Q9H845 621 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 FAM184BQ9ULE4 1060 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 STX8Q9UNK0 236 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 ATP11BQ9Y2G3 1177 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 LAMA4Q16363 1823 aa15.72■□□□□ 0.11
APOC1-209ENST00000592885 LAMA3Q16787 3333 aa15.71■□□□□ 0.11
APOC1-209ENST00000592885 ADAMTS4O75173 837 aa15.71■□□□□ 0.11
APOC1-209ENST00000592885 MYCNP04198 464 aaPredicted RBP15.71■□□□□ 0.11
APOC1-209ENST00000592885 PCP11498 1178 aaKnown RBP15.71■□□□□ 0.11
APOC1-209ENST00000592885 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
APOC1-209ENST00000592885 ADCYAP1R1P41586 468 aa15.71■□□□□ 0.11
APOC1-209ENST00000592885 CTDSPL2Q05D32 466 aa15.71■□□□□ 0.11
APOC1-209ENST00000592885 IKQ13123 557 aaPredicted RBP15.71■□□□□ 0.11
APOC1-209ENST00000592885 TRIM60Q495X7 471 aa15.71■□□□□ 0.11
APOC1-209ENST00000592885 VPS53Q5VIR6 699 aa15.71■□□□□ 0.11
APOC1-209ENST00000592885 ISY1Q9ULR0 285 aaKnown RBP15.71■□□□□ 0.11
APOC1-209ENST00000592885 LRRC37A2A6NM11 1700 aa15.71■□□□□ 0.1
APOC1-209ENST00000592885 SYNRGQ9UMZ2 1314 aa15.7■□□□□ 0.1
APOC1-209ENST00000592885 A0A0D9SFI3 127 aa15.7■□□□□ 0.1
APOC1-209ENST00000592885 MOXD2PA6NHM9 499 aa15.7■□□□□ 0.1
APOC1-209ENST00000592885 RANBP6O60518 1105 aaKnown RBP15.7■□□□□ 0.1
APOC1-209ENST00000592885 SNAI1O95863 264 aaPredicted RBP15.7■□□□□ 0.1
APOC1-209ENST00000592885 NT5C2P49902 561 aa15.7■□□□□ 0.1
APOC1-209ENST00000592885 MFAP1P55081 439 aaKnown RBP15.7■□□□□ 0.1
APOC1-209ENST00000592885 RCSD1Q6JBY9 416 aa15.7■□□□□ 0.1
APOC1-209ENST00000592885 DCAF4Q8WV16 495 aa15.7■□□□□ 0.1
APOC1-209ENST00000592885 ABHD16BQ9H3Z7 469 aa15.7■□□□□ 0.1
APOC1-209ENST00000592885 IL17RBQ9NRM6 502 aa15.7■□□□□ 0.1
APOC1-209ENST00000592885 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.7■□□□□ 0.1
APOC1-209ENST00000592885 CCDC171Q6TFL3 1326 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms