RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 SLC4A3P48751 1232 aa21.82■■□□□ 1.08
CIRBP-237ENST00000592234 LRIT3Q3SXY7 679 aa21.82■■□□□ 1.08
CIRBP-237ENST00000592234 CPXCR1Q8N123 301 aa21.82■■□□□ 1.08
CIRBP-237ENST00000592234 LRRC47Q8N1G4 583 aaKnown RBP21.82■■□□□ 1.08
CIRBP-237ENST00000592234 NEDD1Q8NHV4 660 aa21.82■■□□□ 1.08
CIRBP-237ENST00000592234 KIFC2Q96AC6 838 aa21.82■■□□□ 1.08
CIRBP-237ENST00000592234 LBHD1Q9BQE6 289 aaPredicted RBP21.82■■□□□ 1.08
CIRBP-237ENST00000592234 FEM1BQ9UK73 627 aa21.82■■□□□ 1.08
CIRBP-237ENST00000592234 SYNPO2Q9UMS6 1093 aa21.82■■□□□ 1.08
CIRBP-237ENST00000592234 ATP11BQ9Y2G3 1177 aa21.82■■□□□ 1.08
CIRBP-237ENST00000592234 PLIN4Q96Q06 1357 aa21.82■■□□□ 1.08
CIRBP-237ENST00000592234 SALL3Q9BXA9 1300 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 LTBP2Q14767 1821 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 RARBP10826 455 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 TFAP4Q01664 338 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 LRRC41Q15345 812 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 SLC39A5Q6ZMH5 540 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 GMCL1P1Q8NEA9 526 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 DDX11Q96FC9 970 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 RIPK3Q9Y572 518 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 MCM3APO60318 1980 aa21.81■■□□□ 1.08
CIRBP-237ENST00000592234 ATP2A1O14983 1001 aa21.8■■□□□ 1.08
CIRBP-237ENST00000592234 ADCYAP1R1P41586 468 aa21.8■■□□□ 1.08
CIRBP-237ENST00000592234 SLFN13Q68D06 897 aa21.8■■□□□ 1.08
CIRBP-237ENST00000592234 CCDC129Q6ZRS4 1044 aa21.8■■□□□ 1.08
CIRBP-237ENST00000592234 XPNPEP3Q9NQH7 507 aa21.8■■□□□ 1.08
CIRBP-237ENST00000592234 ISY1Q9ULR0 285 aaKnown RBP21.8■■□□□ 1.08
CIRBP-237ENST00000592234 CNPY2Q9Y2B0 182 aa21.8■■□□□ 1.08
CIRBP-237ENST00000592234 BMP3P12645 472 aa21.79■■□□□ 1.08
CIRBP-237ENST00000592234 TAL1P17542 331 aaPredicted RBP21.79■■□□□ 1.08
CIRBP-237ENST00000592234 GPR153Q6NV75 609 aa21.79■■□□□ 1.08
CIRBP-237ENST00000592234 FERMT2Q96AC1 680 aa21.79■■□□□ 1.08
CIRBP-237ENST00000592234 SLC38A10Q9HBR0 1119 aa21.79■■□□□ 1.08
CIRBP-237ENST00000592234 RAVER2Q9HCJ3 691 aaKnown RBP21.79■■□□□ 1.08
CIRBP-237ENST00000592234 ZNF865P0CJ78 1059 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-237ENST00000592234 AKR1A1P14550 325 aa21.78■■□□□ 1.08
CIRBP-237ENST00000592234 RNF180Q86T96 592 aa21.78■■□□□ 1.08
CIRBP-237ENST00000592234 MSL3Q8N5Y2 521 aaKnown RBP21.78■■□□□ 1.08
CIRBP-237ENST00000592234 EXOC6Q8TAG9 804 aa21.78■■□□□ 1.08
CIRBP-237ENST00000592234 EVI5LQ96CN4 794 aa21.78■■□□□ 1.08
CIRBP-237ENST00000592234 CTDSPL2Q05D32 466 aa21.77■■□□□ 1.08
CIRBP-237ENST00000592234 SNX17Q15036 470 aa21.77■■□□□ 1.08
CIRBP-237ENST00000592234 TRIM60Q495X7 471 aa21.77■■□□□ 1.08
CIRBP-237ENST00000592234 PPP4R3BQ5MIZ7 849 aa21.77■■□□□ 1.08
CIRBP-237ENST00000592234 PRDM5Q9NQX1 630 aaPredicted RBP21.77■■□□□ 1.08
CIRBP-237ENST00000592234 SUPT16HQ9Y5B9 1047 aaKnown RBP21.77■■□□□ 1.08
CIRBP-237ENST00000592234 TSPY2A6NKD2 308 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 TMEM232C9JQI7 657 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 PGK1P00558 417 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 STAT2P52630 851 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 OAZ1P54368 228 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 PDE1AP54750 535 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 HDAC1Q13547 482 aaPredicted RBP21.76■■□□□ 1.07
CIRBP-237ENST00000592234 ANKRD35Q8N283 1001 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 CHST13Q8NET6 341 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 FBXO40Q9UH90 709 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 STX8Q9UNK0 236 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 PHF24Q9UPV7 400 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.76■■□□□ 1.07
CIRBP-237ENST00000592234 SYNGAP1Q96PV0 1343 aa21.76■■□□□ 1.07
CIRBP-237ENST00000592234 DNAJC25-GNG10A0A024R161 153 aa21.75■■□□□ 1.07
CIRBP-237ENST00000592234 FOXP2O15409 715 aa21.75■■□□□ 1.07
CIRBP-237ENST00000592234 FDX1P10109 184 aa21.75■■□□□ 1.07
CIRBP-237ENST00000592234 SLC1A4P43007 532 aa21.75■■□□□ 1.07
CIRBP-237ENST00000592234 IKQ13123 557 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-237ENST00000592234 MAMDC4Q6UXC1 1216 aa21.75■■□□□ 1.07
CIRBP-237ENST00000592234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.75■■□□□ 1.07
CIRBP-237ENST00000592234 DEFB123Q8N688 67 aa21.75■■□□□ 1.07
CIRBP-237ENST00000592234 LENG1Q96BZ8 264 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-237ENST00000592234 HELLSQ9NRZ9 838 aa21.75■■□□□ 1.07
CIRBP-237ENST00000592234 ZHX1Q9UKY1 873 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-237ENST00000592234 VPS53Q5VIR6 699 aa21.74■■□□□ 1.07
CIRBP-237ENST00000592234 C1orf53Q5VUE5 145 aa21.74■■□□□ 1.07
CIRBP-237ENST00000592234 ZNF467Q7Z7K2 595 aaPredicted RBP21.74■■□□□ 1.07
CIRBP-237ENST00000592234 FAM160B2Q86V87 743 aa21.74■■□□□ 1.07
CIRBP-237ENST00000592234 CHURC1Q8WUH1 139 aa21.74■■□□□ 1.07
CIRBP-237ENST00000592234 CHMP4CQ96CF2 233 aa21.74■■□□□ 1.07
CIRBP-237ENST00000592234 GMCL1Q96IK5 515 aa21.74■■□□□ 1.07
CIRBP-237ENST00000592234 INCENPQ9NQS7 918 aa21.74■■□□□ 1.07
CIRBP-237ENST00000592234 HOMER2Q9NSB8 354 aa21.74■■□□□ 1.07
CIRBP-237ENST00000592234 FAM184BQ9ULE4 1060 aa21.74■■□□□ 1.07
CIRBP-237ENST00000592234 RANBP6O60518 1105 aaKnown RBP21.73■■□□□ 1.07
CIRBP-237ENST00000592234 SNAI1O95863 264 aaPredicted RBP21.73■■□□□ 1.07
CIRBP-237ENST00000592234 MCCP23508 829 aa21.73■■□□□ 1.07
CIRBP-237ENST00000592234 Q7L0L9 218 aa21.73■■□□□ 1.07
CIRBP-237ENST00000592234 STAG1Q8WVM7 1258 aa21.73■■□□□ 1.07
CIRBP-237ENST00000592234 NMT2O60551 498 aa21.72■■□□□ 1.07
CIRBP-237ENST00000592234 ADAMTS4O75173 837 aa21.72■■□□□ 1.07
CIRBP-237ENST00000592234 ACAD9Q9H845 621 aa21.72■■□□□ 1.07
CIRBP-237ENST00000592234 PDLIM7Q9NR12 457 aa21.72■■□□□ 1.07
CIRBP-237ENST00000592234 IL17RBQ9NRM6 502 aa21.72■■□□□ 1.07
CIRBP-237ENST00000592234 ANAPC4Q9UJX5 808 aa21.72■■□□□ 1.07
CIRBP-237ENST00000592234 COL6A3P12111 3177 aa21.72■■□□□ 1.07
CIRBP-237ENST00000592234 A0A1W2PQ45 241 aaPredicted RBP21.71■■□□□ 1.07
CIRBP-237ENST00000592234 A0A1W2PQY0 241 aa21.71■■□□□ 1.07
CIRBP-237ENST00000592234 IRX6P78412 446 aaPredicted RBP21.71■■□□□ 1.07
CIRBP-237ENST00000592234 TLE2Q04725 743 aa21.71■■□□□ 1.07
CIRBP-237ENST00000592234 ACVR2BQ13705 512 aa21.71■■□□□ 1.07
CIRBP-237ENST00000592234 ALX1Q15699 326 aa21.71■■□□□ 1.07
CIRBP-237ENST00000592234 KCTD1Q719H9 257 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms