RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 KIFC2Q96AC6 838 aa23.4■■□□□ 1.34
TNFRSF11A-204ENST00000592013 ISY1Q9ULR0 285 aaKnown RBP23.4■■□□□ 1.34
TNFRSF11A-204ENST00000592013 FRMPD3Q5JV73 1810 aa23.4■■□□□ 1.34
TNFRSF11A-204ENST00000592013 ALPK3Q96L96 1907 aa23.39■■□□□ 1.34
TNFRSF11A-204ENST00000592013 SYN1P17600 705 aa23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 MAGEA10P43363 369 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 STAT2P52630 851 aa23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 PDE1AP54750 535 aa23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 ZNF792Q3KQV3 632 aa23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 SLFN13Q68D06 897 aa23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 ZNF467Q7Z7K2 595 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 TDHQ8IZJ6 230 aa23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 REPS2Q8NFH8 660 aa23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 OTUD7AQ8TE49 926 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 GMCL1Q96IK5 515 aa23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 SEC62Q99442 399 aaKnown RBP23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 NUP88Q99567 741 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF11A-204ENST00000592013 SYNGAP1Q96PV0 1343 aa23.38■■□□□ 1.33
TNFRSF11A-204ENST00000592013 SALL3Q9BXA9 1300 aa23.38■■□□□ 1.33
TNFRSF11A-204ENST00000592013 MYCNP04198 464 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF11A-204ENST00000592013 AKR1A1P14550 325 aa23.38■■□□□ 1.33
TNFRSF11A-204ENST00000592013 IKQ13123 557 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF11A-204ENST00000592013 SLC38A10Q9HBR0 1119 aa23.38■■□□□ 1.33
TNFRSF11A-204ENST00000592013 XPNPEP3Q9NQH7 507 aa23.38■■□□□ 1.33
TNFRSF11A-204ENST00000592013 PGK2P07205 417 aa23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 SLC1A4P43007 532 aa23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 ALX1Q15699 326 aa23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 MCMDC2Q4G0Z9 681 aa23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 GJC2Q5T442 439 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 CPXCR1Q8N123 301 aa23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 ANKRD35Q8N283 1001 aa23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 PIAS4Q8N2W9 510 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 ANAPC4Q9UJX5 808 aa23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 STX8Q9UNK0 236 aa23.37■■□□□ 1.33
TNFRSF11A-204ENST00000592013 COL11A1P12107 1806 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF11A-204ENST00000592013 MYH4Q9Y623 1939 aa23.36■■□□□ 1.33
TNFRSF11A-204ENST00000592013 PCP11498 1178 aaKnown RBP23.36■■□□□ 1.33
TNFRSF11A-204ENST00000592013 NT5C2P49902 561 aa23.36■■□□□ 1.33
TNFRSF11A-204ENST00000592013 TKFCQ3LXA3 575 aa23.36■■□□□ 1.33
TNFRSF11A-204ENST00000592013 LRIT3Q3SXY7 679 aa23.36■■□□□ 1.33
TNFRSF11A-204ENST00000592013 LRRC47Q8N1G4 583 aaKnown RBP23.36■■□□□ 1.33
TNFRSF11A-204ENST00000592013 PLA2G6O60733 806 aa23.35■■□□□ 1.33
TNFRSF11A-204ENST00000592013 ATN1P54259 1190 aaPredicted RBP23.35■■□□□ 1.33
TNFRSF11A-204ENST00000592013 FAM47AQ5JRC9 791 aa23.35■■□□□ 1.33
TNFRSF11A-204ENST00000592013 C1orf53Q5VUE5 145 aa23.35■■□□□ 1.33
TNFRSF11A-204ENST00000592013 MAMDC4Q6UXC1 1216 aa23.35■■□□□ 1.33
TNFRSF11A-204ENST00000592013 STAG1Q8WVM7 1258 aa23.35■■□□□ 1.33
TNFRSF11A-204ENST00000592013 FAM184BQ9ULE4 1060 aa23.35■■□□□ 1.33
TNFRSF11A-204ENST00000592013 TRIM6-TRIM34B2RNG4 842 aa23.34■■□□□ 1.33
TNFRSF11A-204ENST00000592013 RANBP6O60518 1105 aaKnown RBP23.34■■□□□ 1.33
TNFRSF11A-204ENST00000592013 SLC4A3P48751 1232 aa23.34■■□□□ 1.33
TNFRSF11A-204ENST00000592013 RTP1P59025 263 aa23.34■■□□□ 1.33
TNFRSF11A-204ENST00000592013 LRRC41Q15345 812 aa23.34■■□□□ 1.33
TNFRSF11A-204ENST00000592013 PRAMEF19Q5SWL8 479 aa23.34■■□□□ 1.33
TNFRSF11A-204ENST00000592013 SLC39A5Q6ZMH5 540 aa23.34■■□□□ 1.33
TNFRSF11A-204ENST00000592013 SPC25Q9HBM1 224 aa23.34■■□□□ 1.33
TNFRSF11A-204ENST00000592013 PNMA2Q9UL42 364 aa23.34■■□□□ 1.33
TNFRSF11A-204ENST00000592013 TMEM232C9JQI7 657 aa23.33■■□□□ 1.33
TNFRSF11A-204ENST00000592013 ORC4O43929 436 aa23.33■■□□□ 1.33
TNFRSF11A-204ENST00000592013 TSEN34Q9BSV6 310 aaKnown RBP23.33■■□□□ 1.33
TNFRSF11A-204ENST00000592013 ACAD9Q9H845 621 aa23.33■■□□□ 1.33
TNFRSF11A-204ENST00000592013 RAVER2Q9HCJ3 691 aaKnown RBP23.33■■□□□ 1.33
TNFRSF11A-204ENST00000592013 TOMM22Q9NS69 142 aa23.33■■□□□ 1.33
TNFRSF11A-204ENST00000592013 ATP11BQ9Y2G3 1177 aa23.33■■□□□ 1.33
TNFRSF11A-204ENST00000592013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.33■■□□□ 1.33
TNFRSF11A-204ENST00000592013 RANBP2P49792 3224 aaKnown RBP23.33■■□□□ 1.32
TNFRSF11A-204ENST00000592013 ZMYM6O95789 1325 aa23.33■■□□□ 1.32
TNFRSF11A-204ENST00000592013 ZNFX1Q9P2E3 1918 aaKnown RBP23.32■■□□□ 1.32
TNFRSF11A-204ENST00000592013 DNAJC25-GNG10A0A024R161 153 aa23.32■■□□□ 1.32
TNFRSF11A-204ENST00000592013 ANO1Q5XXA6 986 aa23.32■■□□□ 1.32
TNFRSF11A-204ENST00000592013 RCSD1Q6JBY9 416 aa23.32■■□□□ 1.32
TNFRSF11A-204ENST00000592013 NUP133Q8WUM0 1156 aa23.32■■□□□ 1.32
TNFRSF11A-204ENST00000592013 ABHD16BQ9H3Z7 469 aa23.32■■□□□ 1.32
TNFRSF11A-204ENST00000592013 RNF41Q9H4P4 317 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF11A-204ENST00000592013 PHF24Q9UPV7 400 aa23.32■■□□□ 1.32
TNFRSF11A-204ENST00000592013 PLXNA1Q9UIW2 1896 aa23.31■■□□□ 1.32
TNFRSF11A-204ENST00000592013 HIP1O00291 1037 aa23.31■■□□□ 1.32
TNFRSF11A-204ENST00000592013 ADCYAP1R1P41586 468 aa23.31■■□□□ 1.32
TNFRSF11A-204ENST00000592013 SNX17Q15036 470 aa23.31■■□□□ 1.32
TNFRSF11A-204ENST00000592013 MOXD2PA6NHM9 499 aa23.3■■□□□ 1.32
TNFRSF11A-204ENST00000592013 CTDSPL2Q05D32 466 aa23.3■■□□□ 1.32
TNFRSF11A-204ENST00000592013 CCDC129Q6ZRS4 1044 aa23.3■■□□□ 1.32
TNFRSF11A-204ENST00000592013 SMC5Q8IY18 1101 aa23.3■■□□□ 1.32
TNFRSF11A-204ENST00000592013 DCAF4Q8WV16 495 aa23.3■■□□□ 1.32
TNFRSF11A-204ENST00000592013 YTHDC1Q96MU7 727 aaKnown RBP23.3■■□□□ 1.32
TNFRSF11A-204ENST00000592013 LNPKQ9C0E8 428 aa23.3■■□□□ 1.32
TNFRSF11A-204ENST00000592013 RIPK3Q9Y572 518 aa23.3■■□□□ 1.32
TNFRSF11A-204ENST00000592013 DUSP11O75319 330 aaKnown RBP23.29■■□□□ 1.32
TNFRSF11A-204ENST00000592013 FGRP09769 529 aa23.29■■□□□ 1.32
TNFRSF11A-204ENST00000592013 ZNF865P0CJ78 1059 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF11A-204ENST00000592013 MCCP23508 829 aa23.29■■□□□ 1.32
TNFRSF11A-204ENST00000592013 MDM2Q00987 491 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF11A-204ENST00000592013 PCSK9Q8NBP7 692 aaKnown RBP23.29■■□□□ 1.32
TNFRSF11A-204ENST00000592013 RILPL2Q969X0 211 aa23.29■■□□□ 1.32
TNFRSF11A-204ENST00000592013 ZHX1Q9UKY1 873 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF11A-204ENST00000592013 TACC3Q9Y6A5 838 aa23.29■■□□□ 1.32
TNFRSF11A-204ENST00000592013 ASB14A6NK59 587 aa23.28■■□□□ 1.32
TNFRSF11A-204ENST00000592013 POTEB2H3BUK9 544 aa23.28■■□□□ 1.32
TNFRSF11A-204ENST00000592013 TOP1P11387 765 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms