RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 NCAPG2Q86XI2 1143 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 CCAR1Q8IX12 1150 aaKnown RBP13.56□□□□□ -0.24
VMP1-211ENST00000591315 CPXCR1Q8N123 301 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 USP6NLQ92738 828 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 ZNF333Q96JL9 665 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 KRT23Q9C075 422 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 RAVER2Q9HCJ3 691 aaKnown RBP13.56□□□□□ -0.24
VMP1-211ENST00000591315 FEM1BQ9UK73 627 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 SYNPO2Q9UMS6 1093 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 TNKSO95271 1327 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 BAZ2BQ9UIF8 2168 aaKnown RBP13.55□□□□□ -0.24
VMP1-211ENST00000591315 PDHBP11177 359 aa13.55□□□□□ -0.24
VMP1-211ENST00000591315 PTPREP23469 700 aa13.55□□□□□ -0.24
VMP1-211ENST00000591315 STAT3P40763 770 aa13.55□□□□□ -0.24
VMP1-211ENST00000591315 CCNA1P78396 465 aa13.55□□□□□ -0.24
VMP1-211ENST00000591315 MB21D2Q8IYB1 491 aaPredicted RBP13.55□□□□□ -0.24
VMP1-211ENST00000591315 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
VMP1-211ENST00000591315 MB21D1Q8N884 522 aa13.55□□□□□ -0.24
VMP1-211ENST00000591315 PRPF38AQ8NAV1 312 aaKnown RBP13.55□□□□□ -0.24
VMP1-211ENST00000591315 ANKS1AQ92625 1134 aa13.55□□□□□ -0.24
VMP1-211ENST00000591315 TTC14Q96N46 770 aa13.55□□□□□ -0.24
VMP1-211ENST00000591315 CNNM2Q9H8M5 875 aa13.55□□□□□ -0.24
VMP1-211ENST00000591315 INHAP05111 366 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
VMP1-211ENST00000591315 IRF5Q13568 498 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 PPP4R3BQ5MIZ7 849 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 CCDC174Q6PII3 467 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 IQCA1Q86XH1 822 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 PNMA1Q8ND90 353 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 NPLOC4Q8TAT6 608 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 DCAF4Q8WV16 495 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 TRIB2Q92519 343 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 UBAC1Q9BSL1 405 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 SLC38A10Q9HBR0 1119 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
VMP1-211ENST00000591315 FLRT1Q9NZU1 646 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 BIN2Q9UBW5 565 aaPredicted RBP13.54□□□□□ -0.24
VMP1-211ENST00000591315 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
VMP1-211ENST00000591315 TNRC18O15417 2968 aaPredicted RBP13.53□□□□□ -0.24
VMP1-211ENST00000591315 COBLO75128 1261 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 ZBED4O75132 1171 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 SNHG28P0DPA3 235 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 TRDNQ13061 729 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 MAP2K5Q13163 448 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 GRB14Q14449 540 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 SNRNP48Q6IEG0 339 aaKnown RBP13.53□□□□□ -0.24
VMP1-211ENST00000591315 RIOX2Q8IUF8 465 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 SHCBP1Q8NEM2 672 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 NCOA7Q8NI08 942 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 AGBL1Q96MI9 1066 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 LRRC2Q9BYS8 371 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 UBA5Q9GZZ9 404 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 UNC93B1Q9H1C4 597 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 ZNF536O15090 1300 aa13.53□□□□□ -0.24
VMP1-211ENST00000591315 SLC15A5A6NIM6 579 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 IFIT3O14879 490 aaKnown RBP13.52□□□□□ -0.25
VMP1-211ENST00000591315 PGK2P07205 417 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 EN2P19622 333 aaPredicted RBP13.52□□□□□ -0.25
VMP1-211ENST00000591315 ADORA2AP29274 412 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 STAT2P52630 851 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 CASC1Q6TDU7 716 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 RALYLQ86SE5 291 aaKnown RBP13.52□□□□□ -0.25
VMP1-211ENST00000591315 FAM160B2Q86V87 743 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 CHURC1Q8WUH1 139 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 KAT14Q9H8E8 782 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 HOMER2Q9NSB8 354 aa13.52□□□□□ -0.25
VMP1-211ENST00000591315 PLA2G6O60733 806 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 CCL5P13501 91 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 RGS2P41220 211 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 SLC35G1Q2M3R5 365 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 ADCK5Q3MIX3 580 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
VMP1-211ENST00000591315 BTNL9Q6UXG8 535 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 NBPF11Q86T75 865 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 STAG2Q8N3U4 1231 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 IGDCC4Q8TDY8 1250 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 PXYLP1Q8TE99 480 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 SOCS4Q8WXH5 440 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 TCEANC2Q96MN5 208 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 TEX13BQ9BXU2 312 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 MROH8Q9H579 483 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 IVNS1ABPQ9Y6Y0 642 aa13.51□□□□□ -0.25
VMP1-211ENST00000591315 PDE4DIPQ5VU43 2346 aa13.5□□□□□ -0.25
VMP1-211ENST00000591315 PRC1O43663 620 aa13.5□□□□□ -0.25
VMP1-211ENST00000591315 SLC25A27O95847 323 aa13.5□□□□□ -0.25
VMP1-211ENST00000591315 XRCC5P13010 732 aaKnown RBP13.5□□□□□ -0.25
VMP1-211ENST00000591315 CPA1P15085 419 aa13.5□□□□□ -0.25
VMP1-211ENST00000591315 C1QBPQ07021 282 aaKnown RBP13.5□□□□□ -0.25
VMP1-211ENST00000591315 CCDC178Q5BJE1 867 aa13.5□□□□□ -0.25
VMP1-211ENST00000591315 TMEM67Q5HYA8 995 aa13.5□□□□□ -0.25
VMP1-211ENST00000591315 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
VMP1-211ENST00000591315 MMP19Q99542 508 aa13.5□□□□□ -0.25
VMP1-211ENST00000591315 APBA2Q99767 749 aa13.5□□□□□ -0.25
VMP1-211ENST00000591315 CTDP1Q9Y5B0 961 aaPredicted RBP13.5□□□□□ -0.25
VMP1-211ENST00000591315 PLXNA1Q9UIW2 1896 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms