RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 DIS3Q9Y2L1 958 aaKnown RBP21.3■■□□□ 1
VAT1-208ENST00000590924 F5H6K3 240 aa21.29■■□□□ 1
VAT1-208ENST00000590924 KLRC3Q07444 240 aa21.29■■□□□ 1
VAT1-208ENST00000590924 KCTD2Q14681 263 aa21.29■■□□□ 1
VAT1-208ENST00000590924 MCMDC2Q4G0Z9 681 aa21.29■■□□□ 1
VAT1-208ENST00000590924 ZNF444Q8N0Y2 327 aaPredicted RBP21.29■■□□□ 1
VAT1-208ENST00000590924 SEC62Q99442 399 aaKnown RBP21.29■■□□□ 1
VAT1-208ENST00000590924 NUP88Q99567 741 aaPredicted RBP21.29■■□□□ 1
VAT1-208ENST00000590924 NACAP1Q9BZK3 213 aa21.29■■□□□ 1
VAT1-208ENST00000590924 DIAPH3Q9NSV4 1193 aa21.29■■□□□ 1
VAT1-208ENST00000590924 KBTBD13C9JR72 458 aa21.28■■□□□ 1
VAT1-208ENST00000590924 LRIT3Q3SXY7 679 aa21.28■■□□□ 1
VAT1-208ENST00000590924 PRAMEF19Q5SWL8 479 aa21.28■■□□□ 1
VAT1-208ENST00000590924 GJC2Q5T442 439 aaPredicted RBP21.28■■□□□ 1
VAT1-208ENST00000590924 ANO1Q5XXA6 986 aa21.28■■□□□ 1
VAT1-208ENST00000590924 PRPF38AQ8NAV1 312 aaKnown RBP21.28■■□□□ 1
VAT1-208ENST00000590924 MKL1Q969V6 931 aa21.28■■□□□ 1
VAT1-208ENST00000590924 CEP95Q96GE4 821 aa21.28■■□□□ 1
VAT1-208ENST00000590924 TEX13BQ9BXU2 312 aa21.28■■□□□ 1
VAT1-208ENST00000590924 UBE2OQ9C0C9 1292 aaKnown RBP21.28■■□□□ 1
VAT1-208ENST00000590924 CLIP2Q9UDT6 1046 aa21.28■■□□□ 1
VAT1-208ENST00000590924 PRDM1O75626 825 aa21.27■■□□□ 1
VAT1-208ENST00000590924 PGK2P07205 417 aa21.27■■□□□ 1
VAT1-208ENST00000590924 ATN1P54259 1190 aaPredicted RBP21.27■■□□□ 1
VAT1-208ENST00000590924 MFAP1P55081 439 aaKnown RBP21.27■■□□□ 1
VAT1-208ENST00000590924 ZNF792Q3KQV3 632 aa21.27■■□□□ 1
VAT1-208ENST00000590924 GPR153Q6NV75 609 aa21.27■■□□□ 1
VAT1-208ENST00000590924 NAPBQ9H115 298 aa21.27■■□□□ 1
VAT1-208ENST00000590924 MTMR4Q9NYA4 1195 aa21.27■■□□□ 1
VAT1-208ENST00000590924 ATP2A1O14983 1001 aa21.26■□□□□ 0.99
VAT1-208ENST00000590924 TTLL1O95922 423 aa21.26■□□□□ 0.99
VAT1-208ENST00000590924 CHMLP26374 656 aa21.26■□□□□ 0.99
VAT1-208ENST00000590924 RTP1P59025 263 aa21.26■□□□□ 0.99
VAT1-208ENST00000590924 PDE4BQ07343 736 aa21.26■□□□□ 0.99
VAT1-208ENST00000590924 NMIQ13287 307 aaPredicted RBP21.26■□□□□ 0.99
VAT1-208ENST00000590924 RUFY2Q8WXA3 655 aa21.26■□□□□ 0.99
VAT1-208ENST00000590924 FAM227BQ96M60 508 aa21.26■□□□□ 0.99
VAT1-208ENST00000590924 TINF2Q9BSI4 451 aa21.26■□□□□ 0.99
VAT1-208ENST00000590924 SNX17Q15036 470 aa21.25■□□□□ 0.99
VAT1-208ENST00000590924 FAM47AQ5JRC9 791 aa21.25■□□□□ 0.99
VAT1-208ENST00000590924 SNRNP48Q6IEG0 339 aaKnown RBP21.25■□□□□ 0.99
VAT1-208ENST00000590924 GMCL1P1Q8NEA9 526 aa21.25■□□□□ 0.99
VAT1-208ENST00000590924 NEDD1Q8NHV4 660 aa21.25■□□□□ 0.99
VAT1-208ENST00000590924 A0A0D9SFI3 127 aa21.24■□□□□ 0.99
VAT1-208ENST00000590924 SLC3A2P08195 630 aaKnown RBP21.24■□□□□ 0.99
VAT1-208ENST00000590924 MDM2Q00987 491 aaPredicted RBP21.24■□□□□ 0.99
VAT1-208ENST00000590924 PPARAQ07869 468 aa21.24■□□□□ 0.99
VAT1-208ENST00000590924 LRRC41Q15345 812 aa21.24■□□□□ 0.99
VAT1-208ENST00000590924 SLC39A5Q6ZMH5 540 aa21.24■□□□□ 0.99
VAT1-208ENST00000590924 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.24■□□□□ 0.99
VAT1-208ENST00000590924 MSL3Q8N5Y2 521 aaKnown RBP21.24■□□□□ 0.99
VAT1-208ENST00000590924 FEM1BQ9UK73 627 aa21.24■□□□□ 0.99
VAT1-208ENST00000590924 TSPY3P0CV98 308 aa21.23■□□□□ 0.99
VAT1-208ENST00000590924 TSPY8P0CW00 308 aa21.23■□□□□ 0.99
VAT1-208ENST00000590924 RARBP10826 455 aa21.23■□□□□ 0.99
VAT1-208ENST00000590924 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
VAT1-208ENST00000590924 LRRC47Q8N1G4 583 aaKnown RBP21.23■□□□□ 0.99
VAT1-208ENST00000590924 LBHD1Q9BQE6 289 aaPredicted RBP21.23■□□□□ 0.99
VAT1-208ENST00000590924 SLC38A10Q9HBR0 1119 aa21.23■□□□□ 0.99
VAT1-208ENST00000590924 RIPK3Q9Y572 518 aa21.23■□□□□ 0.99
VAT1-208ENST00000590924 RAD50Q92878 1312 aa21.23■□□□□ 0.99
VAT1-208ENST00000590924 COL6A3P12111 3177 aa21.23■□□□□ 0.99
VAT1-208ENST00000590924 DNAJC25-GNG10A0A024R161 153 aa21.22■□□□□ 0.99
VAT1-208ENST00000590924 FOXP2O15409 715 aa21.22■□□□□ 0.99
VAT1-208ENST00000590924 ZBED4O75132 1171 aa21.22■□□□□ 0.99
VAT1-208ENST00000590924 ZNF865P0CJ78 1059 aaPredicted RBP21.22■□□□□ 0.99
VAT1-208ENST00000590924 C1orf53Q5VUE5 145 aa21.22■□□□□ 0.99
VAT1-208ENST00000590924 KIFC2Q96AC6 838 aa21.22■□□□□ 0.99
VAT1-208ENST00000590924 XPNPEP3Q9NQH7 507 aa21.22■□□□□ 0.99
VAT1-208ENST00000590924 PRKAG2Q9UGJ0 569 aa21.22■□□□□ 0.99
VAT1-208ENST00000590924 ATP11BQ9Y2G3 1177 aa21.22■□□□□ 0.99
VAT1-208ENST00000590924 MYCNP04198 464 aaPredicted RBP21.21■□□□□ 0.99
VAT1-208ENST00000590924 AKR1A1P14550 325 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 TAL1P17542 331 aaPredicted RBP21.21■□□□□ 0.99
VAT1-208ENST00000590924 ADCYAP1R1P41586 468 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 OAZ1P54368 228 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 TFAP4Q01664 338 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 CASC1Q6TDU7 716 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 CPXCR1Q8N123 301 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 DDX11Q96FC9 970 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 CNPY2Q9Y2B0 182 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.21■□□□□ 0.99
VAT1-208ENST00000590924 CTDP1Q9Y5B0 961 aaPredicted RBP21.21■□□□□ 0.99
VAT1-208ENST00000590924 CCDC171Q6TFL3 1326 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 SYNGAP1Q96PV0 1343 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 LCTP09848 1927 aa21.21■□□□□ 0.99
VAT1-208ENST00000590924 CDC45O75419 566 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 FDX1P10109 184 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 BMP3P12645 472 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 ALX1Q15699 326 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 PPP4R3BQ5MIZ7 849 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 SLFN13Q68D06 897 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 MAMDC4Q6UXC1 1216 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 CCDC129Q6ZRS4 1044 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 ZNF467Q7Z7K2 595 aaPredicted RBP21.2■□□□□ 0.98
VAT1-208ENST00000590924 RAVER2Q9HCJ3 691 aaKnown RBP21.2■□□□□ 0.98
VAT1-208ENST00000590924 PHF24Q9UPV7 400 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 LRRC37A2A6NM11 1700 aa21.2■□□□□ 0.98
VAT1-208ENST00000590924 STAT2P52630 851 aa21.19■□□□□ 0.98
VAT1-208ENST00000590924 TRIM60Q495X7 471 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms