RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 TDO2P48775 406 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 NMIQ13287 307 aaPredicted RBP13.07□□□□□ -0.32
GFAP-217ENST00000590922 SBK1Q52WX2 424 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 VPS53Q5VIR6 699 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 C16orf86Q6ZW13 317 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 NCAPG2Q86XI2 1143 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 IFNL3Q8IZI9 196 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 MAML3Q96JK9 1138 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 XPNPEP3Q9NQH7 507 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 NRBP1Q9UHY1 535 aa13.07□□□□□ -0.32
GFAP-217ENST00000590922 MYH8P13535 1937 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 KIAA0355O15063 1070 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 FOXP2O15409 715 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 FCER1AP12319 257 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 AKR1B1P15121 316 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 RAG1P15918 1043 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 SDSP20132 328 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 DSG3P32926 999 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 EPHB4P54760 987 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 FPGSQ05932 587 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 TJAP1Q5JTD0 557 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 RNF180Q86T96 592 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 PARP14Q460N5 1801 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 PLXNA1Q9UIW2 1896 aa13.06□□□□□ -0.32
GFAP-217ENST00000590922 MYO9BQ13459 2157 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 COL11A1P12107 1806 aaPredicted RBP13.05□□□□□ -0.32
GFAP-217ENST00000590922 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.05□□□□□ -0.32
GFAP-217ENST00000590922 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.05□□□□□ -0.32
GFAP-217ENST00000590922 A0A1W2PQ45 241 aaPredicted RBP13.05□□□□□ -0.32
GFAP-217ENST00000590922 A0A1W2PQY0 241 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 PQBP1O60828 265 aaKnown RBP13.05□□□□□ -0.32
GFAP-217ENST00000590922 FLOT1O75955 427 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 PGK1P00558 417 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
GFAP-217ENST00000590922 DNAJB2P25686 324 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 GRIN2CQ14957 1233 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 ZNF589Q86UQ0 364 aaPredicted RBP13.05□□□□□ -0.32
GFAP-217ENST00000590922 CLEC10AQ8IUN9 316 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 NAPBQ9H115 298 aa13.05□□□□□ -0.32
GFAP-217ENST00000590922 TNFRSF10AO00220 468 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 SLC25A27O95847 323 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 TMEM179Q6ZVK1 233 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 SKAP1Q86WV1 359 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 TICAM2Q86XR7 235 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 USP38Q8NB14 1042 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 ATG4CQ96DT6 458 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 ZNF576Q9H609 170 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 ARHGEF10LQ9HCE6 1279 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 TMEM39AQ9NV64 488 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 ROBO3Q96MS0 1386 aa13.04□□□□□ -0.32
GFAP-217ENST00000590922 MUC3AQ02505 3323 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 PRDM1O75626 825 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 COL9A1P20849 921 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 RASA1P20936 1047 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 PPARAQ07869 468 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 TMEM132BQ14DG7 1078 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
GFAP-217ENST00000590922 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
GFAP-217ENST00000590922 ANKRD33Q7Z3H0 272 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 SIAH1Q8IUQ4 282 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 CCDC17Q96LX7 622 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 TOX2Q96NM4 488 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 MMP19Q99542 508 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 TINF2Q9BSI4 451 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 TSEN34Q9BSV6 310 aaKnown RBP13.03□□□□□ -0.32
GFAP-217ENST00000590922 SH2D4AQ9H788 454 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 MKNK2Q9HBH9 465 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 DIS3Q9Y2L1 958 aaKnown RBP13.03□□□□□ -0.32
GFAP-217ENST00000590922 NCOR1O75376 2440 aa13.03□□□□□ -0.32
GFAP-217ENST00000590922 DCDC2CA8MYV0 355 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 WDR46O15213 610 aaKnown RBP13.02□□□□□ -0.33
GFAP-217ENST00000590922 PGK2P07205 417 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
GFAP-217ENST00000590922 AKR1A1P14550 325 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 ICA1Q05084 483 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 FAAP100Q0VG06 881 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 CENPQQ7L2Z9 268 aaPredicted RBP13.02□□□□□ -0.33
GFAP-217ENST00000590922 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 TIFAQ96CG3 184 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.02□□□□□ -0.33
GFAP-217ENST00000590922 VCPKMTQ9H867 229 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 TMX2Q9Y320 296 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 CCDC171Q6TFL3 1326 aa13.02□□□□□ -0.33
GFAP-217ENST00000590922 TIMP1P01033 207 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 FGAP02671 866 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 NEFLP07196 543 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 ZNF865P0CJ78 1059 aaPredicted RBP13.01□□□□□ -0.33
GFAP-217ENST00000590922 TAL1P17542 331 aaPredicted RBP13.01□□□□□ -0.33
GFAP-217ENST00000590922 ACLYP53396 1101 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 KCTD2Q14681 263 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 ALX1Q15699 326 aa13.01□□□□□ -0.33
GFAP-217ENST00000590922 ZNF792Q3KQV3 632 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms