RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 PI16Q6UXB8 463 aa7.97□□□□□ -1.13
DNMT1-222ENST00000590619 DEFB128Q7Z7B8 93 aa7.97□□□□□ -1.13
DNMT1-222ENST00000590619 HERC6Q8IVU3 1022 aa7.97□□□□□ -1.13
DNMT1-222ENST00000590619 MB21D1Q8N884 522 aa7.97□□□□□ -1.13
DNMT1-222ENST00000590619 XAGE2Q96GT9 111 aa7.97□□□□□ -1.13
DNMT1-222ENST00000590619 PRRX2Q99811 253 aa7.97□□□□□ -1.13
DNMT1-222ENST00000590619 UPF3AQ9H1J1 476 aaKnown RBP7.97□□□□□ -1.13
DNMT1-222ENST00000590619 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
DNMT1-222ENST00000590619 FLT1P17948 1338 aa7.97□□□□□ -1.13
DNMT1-222ENST00000590619 ROBO3Q96MS0 1386 aa7.97□□□□□ -1.13
DNMT1-222ENST00000590619 ATAD5Q96QE3 1844 aa7.96□□□□□ -1.13
DNMT1-222ENST00000590619 C5orf42Q9H799 3197 aa7.96□□□□□ -1.13
DNMT1-222ENST00000590619 MYH13Q9UKX3 1938 aa7.96□□□□□ -1.13
DNMT1-222ENST00000590619 LCHNA4D1U4 455 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 H3BQ06 376 aaPredicted RBP7.96□□□□□ -1.14
DNMT1-222ENST00000590619 B4GALT4O60513 344 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 BAG3O95817 575 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 SLC25A27O95847 323 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 NKX3-2P78367 333 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 BEX3Q00994 111 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 ITGA7Q13683 1181 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 ACVR2BQ13705 512 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 CCDC27Q2M243 656 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 ABCB5Q2M3G0 1257 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 CERKLQ49MI3 558 aaPredicted RBP7.96□□□□□ -1.14
DNMT1-222ENST00000590619 HERC4Q5GLZ8 1057 aaPredicted RBP7.96□□□□□ -1.14
DNMT1-222ENST00000590619 CXCL17Q6UXB2 119 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 MAMDC4Q6UXC1 1216 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 GDPD5Q8WTR4 605 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 EDAQ92838 391 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 PBXIP1Q96AQ6 731 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 ATG4CQ96DT6 458 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 UPF3BQ9BZI7 483 aaKnown RBP7.96□□□□□ -1.14
DNMT1-222ENST00000590619 SPC25Q9HBM1 224 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 MUTYHQ9UIF7 546 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 ZHX1Q9UKY1 873 aaPredicted RBP7.96□□□□□ -1.14
DNMT1-222ENST00000590619 ADAMTS5Q9UNA0 930 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 ZNF536O15090 1300 aa7.96□□□□□ -1.14
DNMT1-222ENST00000590619 DCHS1Q96JQ0 3298 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 CACNA1BQ00975 2339 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 HLA-DOAP06340 250 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 PFKMP08237 780 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 IL15P40933 162 aaPredicted RBP7.95□□□□□ -1.14
DNMT1-222ENST00000590619 ID4P47928 161 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 KCTD2Q14681 263 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 SEPT2Q15019 361 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 CCDC144BQ3MJ40 725 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 ATF7IPQ6VMQ6 1270 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 ASCL5Q7RTU5 278 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 ADGRA1Q86SQ6 560 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 RIOX2Q8IUF8 465 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 SIAH1Q8IUQ4 282 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 ADHFE1Q8IWW8 467 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 MSL3Q8N5Y2 521 aaKnown RBP7.95□□□□□ -1.14
DNMT1-222ENST00000590619 SPATA5Q8NB90 893 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 ATOH1Q92858 354 aaPredicted RBP7.95□□□□□ -1.14
DNMT1-222ENST00000590619 SLC9A7Q96T83 725 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 TANGO6Q9C0B7 1094 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 CABP5Q9NP86 173 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 LRP2BPQ9P2M1 347 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 PRKAG3Q9UGI9 489 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 PA2G4Q9UQ80 394 aaKnown RBP7.95□□□□□ -1.14
DNMT1-222ENST00000590619 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.95□□□□□ -1.14
DNMT1-222ENST00000590619 TECTAO75443 2155 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 IL16Q14005 1332 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 FANCIQ9NVI1 1328 aa7.95□□□□□ -1.14
DNMT1-222ENST00000590619 A0A1B0GUL7 405 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 TMEM221A6NGB7 291 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 PROB1E7EW31 1015 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 M0R296 226 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 FLOT1O75955 427 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 CYP2C9P11712 490 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 PLCG2P16885 1265 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 STAT3P40763 770 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 PKN1Q16512 942 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 TRIM67Q6ZTA4 783 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 TMCO2Q7Z6W1 182 aaPredicted RBP7.94□□□□□ -1.14
DNMT1-222ENST00000590619 RNF135Q8IUD6 432 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 NOL10Q9BSC4 688 aaKnown RBP7.94□□□□□ -1.14
DNMT1-222ENST00000590619 TRPC6Q9Y210 931 aa7.94□□□□□ -1.14
DNMT1-222ENST00000590619 RIF1Q5UIP0 2472 aaKnown RBP7.93□□□□□ -1.14
DNMT1-222ENST00000590619 DNAJC25-GNG10A0A024R161 153 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 CABYRO75952 493 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 RGS20O76081 388 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 ACTN1P12814 892 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 SHMT1P34896 483 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 ERVK-21P61565 698 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 PSMC6P62333 389 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 DYNLL1P63167 89 aaKnown RBP7.93□□□□□ -1.14
DNMT1-222ENST00000590619 NAA16Q6N069 864 aaPredicted RBP7.93□□□□□ -1.14
DNMT1-222ENST00000590619 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.93□□□□□ -1.14
DNMT1-222ENST00000590619 SERPINB13Q9UIV8 391 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 MTUS1Q9ULD2 1270 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 SIPA1L1O43166 1804 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 ZNF236Q9UL36 1845 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 ASTN1O14525 1302 aa7.93□□□□□ -1.14
DNMT1-222ENST00000590619 ZNFX1Q9P2E3 1918 aaKnown RBP7.93□□□□□ -1.14
DNMT1-222ENST00000590619 CACNA1HO95180 2353 aa7.92□□□□□ -1.14
DNMT1-222ENST00000590619 TRIOO75962 3097 aa7.92□□□□□ -1.14
DNMT1-222ENST00000590619 A0A0G2JMZ2 1700 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms