RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 PPP1R9AQ9ULJ8 1098 aa15□□□□□ -0.01
DDX39A-213ENST00000590315 PLXNA1Q9UIW2 1896 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 SMCHD1A6NHR9 2005 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 TLR2O60603 784 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 DSG3P32926 999 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 GCLCP48506 637 aaPredicted RBP14.99□□□□□ -0.01
DDX39A-213ENST00000590315 SYDE2Q5VT97 1194 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 WDR78Q5VTH9 848 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 APOA5Q6Q788 366 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 SGMS1Q86VZ5 419 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 PRPF38AQ8NAV1 312 aaKnown RBP14.99□□□□□ -0.01
DDX39A-213ENST00000590315 GTF3C2Q8WUA4 911 aaPredicted RBP14.99□□□□□ -0.01
DDX39A-213ENST00000590315 UBA5Q9GZZ9 404 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 CPVLQ9H3G5 476 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 HOXC10Q9NYD6 342 aa14.99□□□□□ -0.01
DDX39A-213ENST00000590315 MYPNQ86TC9 1320 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 KLRF2D3W0D1 207 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 FOXN1O15353 648 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 ZBED4O75132 1171 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.01
DDX39A-213ENST00000590315 AK2P54819 239 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 SNAP25P60880 206 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 STK3Q13188 491 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 RABEP1Q15276 862 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 ANKRD1Q15327 319 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 RTN1Q16799 776 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 CCDC174Q6PII3 467 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 CPXCR1Q8N123 301 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 STAG2Q8N3U4 1231 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 PIBF1Q8WXW3 757 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 R3HDMLQ9H3Y0 253 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 VAT1LQ9HCJ6 419 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 BRPF3Q9ULD4 1205 aa14.98□□□□□ -0.01
DDX39A-213ENST00000590315 DOCK3Q8IZD9 2030 aa14.97□□□□□ -0.01
DDX39A-213ENST00000590315 PEX10O60683 326 aa14.97□□□□□ -0.01
DDX39A-213ENST00000590315 SNHG28P0DPA3 235 aa14.97□□□□□ -0.01
DDX39A-213ENST00000590315 TROAPQ12815 778 aa14.97□□□□□ -0.01
DDX39A-213ENST00000590315 TOB2Q14106 344 aaPredicted RBP14.97□□□□□ -0.01
DDX39A-213ENST00000590315 KIF22Q14807 665 aa14.97□□□□□ -0.01
DDX39A-213ENST00000590315 MAD2L2Q9UI95 211 aa14.97□□□□□ -0.01
DDX39A-213ENST00000590315 PRR12Q9ULL5 1215 aa14.97□□□□□ -0.01
DDX39A-213ENST00000590315 ADGRA2Q96PE1 1338 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 GPR25O00155 361 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 ST18O60284 1047 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 FKTNO75072 461 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 CTCFP49711 727 aaPredicted RBP14.96□□□□□ -0.01
DDX39A-213ENST00000590315 GNAQP50148 359 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 ERVK-9P63128 1117 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 ERVK-24P63145 666 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 CCT2P78371 535 aaKnown RBP14.96□□□□□ -0.01
DDX39A-213ENST00000590315 SP3Q02447 781 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 HOMER1Q86YM7 354 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 CCDC82Q8N4S0 544 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 MB21D1Q8N884 522 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 GPRC5AQ8NFJ5 357 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 RBM28Q9NW13 759 aaKnown RBP14.96□□□□□ -0.01
DDX39A-213ENST00000590315 RABGAP1Q9Y3P9 1069 aa14.96□□□□□ -0.01
DDX39A-213ENST00000590315 PALM3A6NDB9 673 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-213ENST00000590315 VWA5AO00534 786 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 PLEKHA8P1O95397 391 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 HSPA8P11142 646 aaKnown RBP14.95□□□□□ -0.02
DDX39A-213ENST00000590315 LBX1P52954 281 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 CCNA1P78396 465 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 FAM110CQ1W6H9 321 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 SNRNP48Q6IEG0 339 aaKnown RBP14.95□□□□□ -0.02
DDX39A-213ENST00000590315 NCAPG2Q86XI2 1143 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 CMTR1Q8N1G2 835 aaKnown RBP14.95□□□□□ -0.02
DDX39A-213ENST00000590315 FANCBQ8NB91 859 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 CD99L2Q8TCZ2 262 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 IL17RAQ96F46 866 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 KIF2CQ99661 725 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 RAVER2Q9HCJ3 691 aaKnown RBP14.95□□□□□ -0.02
DDX39A-213ENST00000590315 TXNRD2Q9NNW7 524 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 BTBD7Q9P203 1132 aa14.95□□□□□ -0.02
DDX39A-213ENST00000590315 CEP350Q5VT06 3117 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 PLA2G6O60733 806 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 BCRP11274 1271 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 TMEM132BQ14DG7 1078 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 CDC37Q16543 378 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-213ENST00000590315 C17orf99Q6UX52 265 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 LBX2Q6XYB7 198 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 ADGRF4Q8IZF3 695 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 ZNF296Q8WUU4 475 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-213ENST00000590315 ERO1AQ96HE7 468 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 MAP3K14Q99558 947 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 CFHR5Q9BXR6 569 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 AGXT2Q9BYV1 514 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 SLKQ9H2G2 1235 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-213ENST00000590315 HOMER2Q9NSB8 354 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 RBPJLQ9UBG7 517 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 SEC63Q9UGP8 760 aaKnown RBP14.94□□□□□ -0.02
DDX39A-213ENST00000590315 CCPG1Q9ULG6 757 aa14.94□□□□□ -0.02
DDX39A-213ENST00000590315 CCDC196A0A1B0GTZ2 297 aa14.93□□□□□ -0.02
DDX39A-213ENST00000590315 CPLX1O14810 134 aa14.93□□□□□ -0.02
DDX39A-213ENST00000590315 CNMDO75829 334 aa14.93□□□□□ -0.02
DDX39A-213ENST00000590315 FMNL1O95466 1100 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-213ENST00000590315 FDX1P10109 184 aa14.93□□□□□ -0.02
DDX39A-213ENST00000590315 ALAS1P13196 640 aa14.93□□□□□ -0.02
DDX39A-213ENST00000590315 PDIA3P30101 505 aaKnown RBP14.93□□□□□ -0.02
DDX39A-213ENST00000590315 USH1GQ495M9 461 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms