RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 SYNPO2Q9UMS6 1093 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 ATP11BQ9Y2G3 1177 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 LRRC41Q15345 812 aa21.35■■□□□ 1.01
PRKCSH-211ENST00000590098 SLC39A5Q6ZMH5 540 aa21.35■■□□□ 1.01
PRKCSH-211ENST00000590098 KIFC2Q96AC6 838 aa21.35■■□□□ 1.01
PRKCSH-211ENST00000590098 DDX11Q96FC9 970 aa21.35■■□□□ 1.01
PRKCSH-211ENST00000590098 FEM1BQ9UK73 627 aa21.35■■□□□ 1.01
PRKCSH-211ENST00000590098 ADCYAP1R1P41586 468 aa21.34■■□□□ 1.01
PRKCSH-211ENST00000590098 FAM47AQ5JRC9 791 aa21.34■■□□□ 1.01
PRKCSH-211ENST00000590098 ANKRD45Q5TZF3 282 aa21.34■■□□□ 1.01
PRKCSH-211ENST00000590098 CPXCR1Q8N123 301 aa21.34■■□□□ 1.01
PRKCSH-211ENST00000590098 LRRC47Q8N1G4 583 aaKnown RBP21.34■■□□□ 1.01
PRKCSH-211ENST00000590098 GMCL1P1Q8NEA9 526 aa21.34■■□□□ 1.01
PRKCSH-211ENST00000590098 NEDD1Q8NHV4 660 aa21.34■■□□□ 1.01
PRKCSH-211ENST00000590098 XPNPEP3Q9NQH7 507 aa21.34■■□□□ 1.01
PRKCSH-211ENST00000590098 CNPY2Q9Y2B0 182 aa21.34■■□□□ 1.01
PRKCSH-211ENST00000590098 TFAP4Q01664 338 aa21.33■■□□□ 1.01
PRKCSH-211ENST00000590098 PPARAQ07869 468 aa21.33■■□□□ 1.01
PRKCSH-211ENST00000590098 Q7L0L9 218 aa21.33■■□□□ 1.01
PRKCSH-211ENST00000590098 RNF180Q86T96 592 aa21.33■■□□□ 1.01
PRKCSH-211ENST00000590098 FERMT2Q96AC1 680 aa21.33■■□□□ 1.01
PRKCSH-211ENST00000590098 ISY1Q9ULR0 285 aaKnown RBP21.33■■□□□ 1.01
PRKCSH-211ENST00000590098 ATP2A1O14983 1001 aa21.32■■□□□ 1
PRKCSH-211ENST00000590098 BMP3P12645 472 aa21.32■■□□□ 1
PRKCSH-211ENST00000590098 AKR1A1P14550 325 aa21.32■■□□□ 1
PRKCSH-211ENST00000590098 SLFN13Q68D06 897 aa21.32■■□□□ 1
PRKCSH-211ENST00000590098 MSL3Q8N5Y2 521 aaKnown RBP21.32■■□□□ 1
PRKCSH-211ENST00000590098 SLC38A10Q9HBR0 1119 aa21.32■■□□□ 1
PRKCSH-211ENST00000590098 RIPK3Q9Y572 518 aa21.32■■□□□ 1
PRKCSH-211ENST00000590098 PLIN4Q96Q06 1357 aa21.32■■□□□ 1
PRKCSH-211ENST00000590098 TAL1P17542 331 aaPredicted RBP21.31■■□□□ 1
PRKCSH-211ENST00000590098 PPP4R3BQ5MIZ7 849 aa21.31■■□□□ 1
PRKCSH-211ENST00000590098 DEFB123Q8N688 67 aa21.31■■□□□ 1
PRKCSH-211ENST00000590098 CRBNQ96SW2 442 aa21.31■■□□□ 1
PRKCSH-211ENST00000590098 RAVER2Q9HCJ3 691 aaKnown RBP21.31■■□□□ 1
PRKCSH-211ENST00000590098 PRDM5Q9NQX1 630 aaPredicted RBP21.31■■□□□ 1
PRKCSH-211ENST00000590098 LAMA2P24043 3122 aaKnown RBP21.31■■□□□ 1
PRKCSH-211ENST00000590098 COL6A3P12111 3177 aa21.3■■□□□ 1
PRKCSH-211ENST00000590098 PGK1P00558 417 aa21.3■■□□□ 1
PRKCSH-211ENST00000590098 ZNF865P0CJ78 1059 aaPredicted RBP21.3■■□□□ 1
PRKCSH-211ENST00000590098 SNX17Q15036 470 aa21.3■■□□□ 1
PRKCSH-211ENST00000590098 TRIM60Q495X7 471 aa21.3■■□□□ 1
PRKCSH-211ENST00000590098 ANKRD35Q8N283 1001 aa21.3■■□□□ 1
PRKCSH-211ENST00000590098 EVI5LQ96CN4 794 aa21.3■■□□□ 1
PRKCSH-211ENST00000590098 FBXO40Q9UH90 709 aa21.3■■□□□ 1
PRKCSH-211ENST00000590098 PHF24Q9UPV7 400 aa21.3■■□□□ 1
PRKCSH-211ENST00000590098 SYNGAP1Q96PV0 1343 aa21.29■■□□□ 1
PRKCSH-211ENST00000590098 SALL3Q9BXA9 1300 aa21.29■■□□□ 1
PRKCSH-211ENST00000590098 FDX1P10109 184 aa21.29■■□□□ 1
PRKCSH-211ENST00000590098 OAZ1P54368 228 aa21.29■■□□□ 1
PRKCSH-211ENST00000590098 IKQ13123 557 aaPredicted RBP21.29■■□□□ 1
PRKCSH-211ENST00000590098 CCDC129Q6ZRS4 1044 aa21.29■■□□□ 1
PRKCSH-211ENST00000590098 CHST13Q8NET6 341 aa21.29■■□□□ 1
PRKCSH-211ENST00000590098 CHURC1Q8WUH1 139 aa21.29■■□□□ 1
PRKCSH-211ENST00000590098 FAM184BQ9ULE4 1060 aa21.29■■□□□ 1
PRKCSH-211ENST00000590098 LTBP2Q14767 1821 aa21.28■■□□□ 1
PRKCSH-211ENST00000590098 DNAJC25-GNG10A0A024R161 153 aa21.28■■□□□ 1
PRKCSH-211ENST00000590098 TSPY2A6NKD2 308 aa21.28■■□□□ 1
PRKCSH-211ENST00000590098 TMEM232C9JQI7 657 aa21.28■■□□□ 1
PRKCSH-211ENST00000590098 STAT2P52630 851 aa21.28■■□□□ 1
PRKCSH-211ENST00000590098 C1orf53Q5VUE5 145 aa21.28■■□□□ 1
PRKCSH-211ENST00000590098 MAMDC4Q6UXC1 1216 aa21.28■■□□□ 1
PRKCSH-211ENST00000590098 ZNF467Q7Z7K2 595 aaPredicted RBP21.28■■□□□ 1
PRKCSH-211ENST00000590098 ZHX1Q9UKY1 873 aaPredicted RBP21.28■■□□□ 1
PRKCSH-211ENST00000590098 STX8Q9UNK0 236 aa21.28■■□□□ 1
PRKCSH-211ENST00000590098 SLC1A4P43007 532 aa21.27■■□□□ 1
PRKCSH-211ENST00000590098 CTDSPL2Q05D32 466 aa21.27■■□□□ 1
PRKCSH-211ENST00000590098 HDAC1Q13547 482 aaPredicted RBP21.27■■□□□ 1
PRKCSH-211ENST00000590098 FAM160B2Q86V87 743 aa21.27■■□□□ 1
PRKCSH-211ENST00000590098 GMCL1Q96IK5 515 aa21.27■■□□□ 1
PRKCSH-211ENST00000590098 MCM3APO60318 1980 aa21.27■□□□□ 0.99
PRKCSH-211ENST00000590098 SNAI1O95863 264 aaPredicted RBP21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 MCCP23508 829 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 PDE1AP54750 535 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 TLE2Q04725 743 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 SLC17A8Q8NDX2 589 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 STAG1Q8WVM7 1258 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 LENG1Q96BZ8 264 aaPredicted RBP21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 CHMP4CQ96CF2 233 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 TSEN34Q9BSV6 310 aaKnown RBP21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 PDLIM7Q9NR12 457 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 HELLSQ9NRZ9 838 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 HOMER2Q9NSB8 354 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 MTMR10Q9NXD2 777 aa21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.26■□□□□ 0.99
PRKCSH-211ENST00000590098 A0A1W2PQ45 241 aaPredicted RBP21.25■□□□□ 0.99
PRKCSH-211ENST00000590098 A0A1W2PQY0 241 aa21.25■□□□□ 0.99
PRKCSH-211ENST00000590098 FOXP2O15409 715 aa21.25■□□□□ 0.99
PRKCSH-211ENST00000590098 RANBP6O60518 1105 aaKnown RBP21.25■□□□□ 0.99
PRKCSH-211ENST00000590098 ACVR2BQ13705 512 aa21.25■□□□□ 0.99
PRKCSH-211ENST00000590098 SH3RF1Q7Z6J0 888 aa21.25■□□□□ 0.99
PRKCSH-211ENST00000590098 INCENPQ9NQS7 918 aa21.25■□□□□ 0.99
PRKCSH-211ENST00000590098 ADAMTS4O75173 837 aa21.24■□□□□ 0.99
PRKCSH-211ENST00000590098 VPS53Q5VIR6 699 aa21.24■□□□□ 0.99
PRKCSH-211ENST00000590098 NUP133Q8WUM0 1156 aa21.24■□□□□ 0.99
PRKCSH-211ENST00000590098 BADQ92934 168 aa21.24■□□□□ 0.99
PRKCSH-211ENST00000590098 ABHD16BQ9H3Z7 469 aa21.24■□□□□ 0.99
PRKCSH-211ENST00000590098 ACAD9Q9H845 621 aa21.24■□□□□ 0.99
PRKCSH-211ENST00000590098 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms