RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 GRB14Q14449 540 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 GRIN2CQ14957 1233 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 PPP4R3BQ5MIZ7 849 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 C9orf50Q5SZB4 431 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 AKNAD1Q5T1N1 836 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 CCDC129Q6ZRS4 1044 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 ARRDC4Q8NCT1 418 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 EXOC6Q8TAG9 804 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 SLF1Q9BQI6 1058 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
TPM4-211ENST00000589897 HELLSQ9NRZ9 838 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 TOMM22Q9NS69 142 aa9.86□□□□□ -0.83
TPM4-211ENST00000589897 TSPY2A6NKD2 308 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 VWA5AO00534 786 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 ZBED4O75132 1171 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 CCND3P30281 292 aaPredicted RBP9.85□□□□□ -0.83
TPM4-211ENST00000589897 COPB2P35606 906 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 STAT3P40763 770 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 MFAP1P55081 439 aaKnown RBP9.85□□□□□ -0.83
TPM4-211ENST00000589897 RTP1P59025 263 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 TFAP4Q01664 338 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 IKQ13123 557 aaPredicted RBP9.85□□□□□ -0.83
TPM4-211ENST00000589897 KCTD2Q14681 263 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 MCMDC2Q4G0Z9 681 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 FAM47AQ5JRC9 791 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 CHD1LQ86WJ1 897 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 USP38Q8NB14 1042 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 BADQ92934 168 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 CEP95Q96GE4 821 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 RNPC3Q96LT9 517 aaKnown RBP9.85□□□□□ -0.83
TPM4-211ENST00000589897 MMP19Q99542 508 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 NUP88Q99567 741 aaPredicted RBP9.85□□□□□ -0.83
TPM4-211ENST00000589897 ZNF576Q9H609 170 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 FBXO28Q9NVF7 368 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 PPP1R9AQ9ULJ8 1098 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 ATP11BQ9Y2G3 1177 aa9.85□□□□□ -0.83
TPM4-211ENST00000589897 SUPT16HQ9Y5B9 1047 aaKnown RBP9.85□□□□□ -0.83
TPM4-211ENST00000589897 SALL3Q9BXA9 1300 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 COL11A1P12107 1806 aaPredicted RBP9.84□□□□□ -0.83
TPM4-211ENST00000589897 ZNFX1Q9P2E3 1918 aaKnown RBP9.84□□□□□ -0.83
TPM4-211ENST00000589897 RANBP6O60518 1105 aaKnown RBP9.84□□□□□ -0.83
TPM4-211ENST00000589897 NDUFB10O96000 172 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 MYCNP04198 464 aaPredicted RBP9.84□□□□□ -0.83
TPM4-211ENST00000589897 HOXC6P09630 235 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 CYP2C19P33261 490 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 CTDSPL2Q05D32 466 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 TMEM132BQ14DG7 1078 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 AAK1Q2M2I8 961 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 SLC39A5Q6ZMH5 540 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 TICAM2Q86XR7 235 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 RIOX2Q8IUF8 465 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 SMC5Q8IY18 1101 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 ABRAQ8N0Z2 381 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 CPXCR1Q8N123 301 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 LRRC47Q8N1G4 583 aaKnown RBP9.84□□□□□ -0.83
TPM4-211ENST00000589897 PRPF38AQ8NAV1 312 aaKnown RBP9.84□□□□□ -0.83
TPM4-211ENST00000589897 NEDD1Q8NHV4 660 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 NPLOC4Q8TAT6 608 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 PPM1EQ8WY54 764 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 KIFC2Q96AC6 838 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 DDX11Q96FC9 970 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.84□□□□□ -0.83
TPM4-211ENST00000589897 PRDM5Q9NQX1 630 aaPredicted RBP9.84□□□□□ -0.83
TPM4-211ENST00000589897 MTMR4Q9NYA4 1195 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 FLRT1Q9NZU1 646 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 DDX20Q9UHI6 824 aaKnown RBP9.84□□□□□ -0.83
TPM4-211ENST00000589897 FEM1BQ9UK73 627 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 STX8Q9UNK0 236 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 TACC3Q9Y6A5 838 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 RLFQ13129 1914 aa9.84□□□□□ -0.83
TPM4-211ENST00000589897 A0A0G2JMZ2 1700 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 IGHDP01880 384 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 NUCB1Q02818 461 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 NMIQ13287 307 aaPredicted RBP9.83□□□□□ -0.84
TPM4-211ENST00000589897 RRP12Q5JTH9 1297 aaKnown RBP9.83□□□□□ -0.84
TPM4-211ENST00000589897 OLFML2BQ68BL8 750 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 SLFN13Q68D06 897 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 SNRNP48Q6IEG0 339 aaKnown RBP9.83□□□□□ -0.84
TPM4-211ENST00000589897 MKL1Q969V6 931 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 CHMP4CQ96CF2 233 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 FAM227BQ96M60 508 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 TEX13BQ9BXU2 312 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 DIAPH3Q9NSV4 1193 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 SYNPO2Q9UMS6 1093 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 PARP14Q460N5 1801 aa9.83□□□□□ -0.84
TPM4-211ENST00000589897 GREB1LQ9C091 1923 aaPredicted RBP9.83□□□□□ -0.84
TPM4-211ENST00000589897 IGKV6D-41A0A0C4DH26 115 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 A0A0D9SFI3 127 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 KBTBD13C9JR72 458 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 HIP1O00291 1037 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 COBLO75128 1261 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 BMP3P12645 472 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 DNAJB2P25686 324 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 SLC1A4P43007 532 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 VPS53Q5VIR6 699 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 GMCL1P1Q8NEA9 526 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 CHURC1Q8WUH1 139 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 TIFAQ96CG3 184 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 ADAMTS5Q9UNA0 930 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 MTMR7Q9Y216 660 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms