RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 RANBP1P43487 201 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
TREM1-206ENST00000589882 CCNG1P51959 295 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 LMNB2Q03252 620 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 PTPAQ15257 358 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 NME9Q86XW9 330 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 WHAMMQ8TF30 809 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 LRRC1Q9BTT6 524 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 NDST4Q9H3R1 872 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 JADE2Q9NQC1 790 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 LMCD1Q9NZU5 365 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 ANKIB1Q9P2G1 1089 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
TREM1-206ENST00000589882 IFIT3O14879 490 aaKnown RBP13.1□□□□□ -0.31
TREM1-206ENST00000589882 CYLC1P35663 651 aaPredicted RBP13.1□□□□□ -0.31
TREM1-206ENST00000589882 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
TREM1-206ENST00000589882 OSBPL1AQ9BXW6 950 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 BOLA2Q9H3K6 86 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 SNX12Q9UMY4 172 aa13.1□□□□□ -0.31
TREM1-206ENST00000589882 REXO2Q9Y3B8 237 aaKnown RBP13.1□□□□□ -0.31
TREM1-206ENST00000589882 TRIM37O94972 964 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 KRT9P35527 623 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 MRPS35P82673 323 aaKnown RBP13.09□□□□□ -0.31
TREM1-206ENST00000589882 ZNF268Q14587 947 aaPredicted RBP13.09□□□□□ -0.31
TREM1-206ENST00000589882 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
TREM1-206ENST00000589882 BEND3Q5T5X7 828 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 C8orf74Q6P047 294 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 CCDC155Q8N6L0 562 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 NOC3LQ8WTT2 800 aaKnown RBP13.09□□□□□ -0.31
TREM1-206ENST00000589882 PLEKHG4BQ96PX9 1271 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 EPAS1Q99814 870 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 CWC25Q9NXE8 425 aaPredicted RBP13.09□□□□□ -0.31
TREM1-206ENST00000589882 LIMA1Q9UHB6 759 aaKnown RBP13.09□□□□□ -0.31
TREM1-206ENST00000589882 SLC12A4Q9UP95 1085 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 RGPD1P0DJD0 1748 aa13.09□□□□□ -0.31
TREM1-206ENST00000589882 KIF28PB7ZC32 967 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 GCOM1H8Y6P7 765 aaPredicted RBP13.08□□□□□ -0.32
TREM1-206ENST00000589882 CPLX1O14810 134 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 DIAPH2O60879 1101 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 RNF8O76064 485 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 MYZAPP0CAP1 466 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 PYGBP11216 843 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 TCP1P17987 556 aaKnown RBP13.08□□□□□ -0.32
TREM1-206ENST00000589882 ALDH3A1P30838 453 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 PAFAH1B1P43034 410 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 MXRA7P84157 204 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 OTUD7BQ6GQQ9 843 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 RUFY4Q6ZNE9 571 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 MAATS1Q7Z4T9 603 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 CPLX4Q7Z7G2 160 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 LMNTD2Q8IXW0 634 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 CCDC197Q8NCU1 140 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 SPATA4Q8NEY3 305 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 RBM41Q96IZ5 413 aaKnown RBP13.08□□□□□ -0.32
TREM1-206ENST00000589882 TRIM4Q9C037 500 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 TAF1DQ9H5J8 278 aaPredicted RBP13.08□□□□□ -0.32
TREM1-206ENST00000589882 TMBIM4Q9HC24 238 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 TRIM10Q9UDY6 481 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 DMGDHQ9UI17 866 aaKnown RBP13.08□□□□□ -0.32
TREM1-206ENST00000589882 CLTAP09496 248 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 SFSWAPQ12872 951 aaKnown RBP13.08□□□□□ -0.32
TREM1-206ENST00000589882 ITIH4Q14624 930 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 LBRQ14739 615 aaKnown RBP13.08□□□□□ -0.32
TREM1-206ENST00000589882 SPRED3Q2MJR0 410 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 GNPTABQ3T906 1256 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 HAUS3Q68CZ6 603 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 CREG2Q8IUH2 290 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 PURBQ96QR8 312 aaKnown RBP13.08□□□□□ -0.32
TREM1-206ENST00000589882 DSCC1Q9BVC3 393 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.08□□□□□ -0.32
TREM1-206ENST00000589882 CEP131Q9UPN4 1083 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 PCDHGA4Q9Y5G9 962 aa13.08□□□□□ -0.32
TREM1-206ENST00000589882 COL15A1P39059 1388 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 N4BP3O15049 544 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 TACC1O75410 805 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 FLOT1O75955 427 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 KIF4AO95239 1232 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 HERVK_113P62684 666 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 CDC37Q16543 378 aaPredicted RBP13.07□□□□□ -0.32
TREM1-206ENST00000589882 SGSM1Q2NKQ1 1148 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 CMPK2Q5EBM0 449 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 PNMA8AQ86V59 439 aaPredicted RBP13.07□□□□□ -0.32
TREM1-206ENST00000589882 SPATA20Q8TB22 786 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 TEKT4Q8WW24 435 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 EAF2Q96CJ1 260 aaPredicted RBP13.07□□□□□ -0.32
TREM1-206ENST00000589882 MAP3K14Q99558 947 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 CNOT10Q9H9A5 744 aaKnown RBP13.07□□□□□ -0.32
TREM1-206ENST00000589882 PLCB1Q9NQ66 1216 aa13.07□□□□□ -0.32
TREM1-206ENST00000589882 ABCC12Q96J65 1359 aa13.06□□□□□ -0.32
TREM1-206ENST00000589882 ZNF609O15014 1411 aa13.06□□□□□ -0.32
TREM1-206ENST00000589882 ZSCAN9O15535 394 aaPredicted RBP13.06□□□□□ -0.32
TREM1-206ENST00000589882 ORC4O43929 436 aa13.06□□□□□ -0.32
TREM1-206ENST00000589882 ATP2C2O75185 946 aa13.06□□□□□ -0.32
TREM1-206ENST00000589882 BYSLQ13895 437 aaKnown RBP13.06□□□□□ -0.32
TREM1-206ENST00000589882 RRP12Q5JTH9 1297 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms